Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 HSPE1P19-201ENST00000603327 295 ntBASIC1.18□□□□□ -2.22
CLCN3P51790 AC021613.1-201ENST00000623880 111 ntBASIC1.18□□□□□ -2.22
CLCN3P51790 AL596211.1-201ENST00000569873 2277 ntBASIC1.18□□□□□ -2.22
CLCN3P51790 Y_RNA.116-201ENST00000363292 103 ntBASIC1.17□□□□□ -2.22
CLCN3P51790 RNU6-647P-201ENST00000364243 107 ntBASIC1.17□□□□□ -2.22
CLCN3P51790 Y_RNA.366-201ENST00000365540 102 ntBASIC1.17□□□□□ -2.22
CLCN3P51790 Y_RNA.563-201ENST00000384707 108 ntBASIC1.17□□□□□ -2.22
CLCN3P51790 RNU6-910P-201ENST00000390844 107 ntBASIC1.17□□□□□ -2.22
CLCN3P51790 AC090844.1-201ENST00000422019 156 ntBASIC1.17□□□□□ -2.22
CLCN3P51790 RNU7-67P-201ENST00000459003 62 ntBASIC1.17□□□□□ -2.22
CLCN3P51790 SNORD79.1-201ENST00000516069 84 ntBASIC1.17□□□□□ -2.22
CLCN3P51790 RNU6-240P-201ENST00000516098 97 ntBASIC1.17□□□□□ -2.22
CLCN3P51790 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
CLCN3P51790 RNU11-2P-201ENST00000516898 142 ntBASIC1.17□□□□□ -2.22
CLCN3P51790 SNORD114-21-201ENST00000606412 72 ntBASIC1.17□□□□□ -2.22
CLCN3P51790 MIR6717-201ENST00000622747 73 ntBASIC1.17□□□□□ -2.22
CLCN3P51790 U2.22-201ENST00000636441 106 ntBASIC1.17□□□□□ -2.22
CLCN3P51790 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
CLCN3P51790 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
CLCN3P51790 RNA5SP264-201ENST00000363115 107 ntBASIC1.16□□□□□ -2.22
CLCN3P51790 Y_RNA.127-201ENST00000363386 109 ntBASIC1.16□□□□□ -2.22
CLCN3P51790 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
CLCN3P51790 RNU6-22P-201ENST00000384355 107 ntBASIC1.16□□□□□ -2.22
CLCN3P51790 MIR1185-1-201ENST00000408598 86 ntBASIC1.16□□□□□ -2.22
CLCN3P51790 RNA5SP144-201ENST00000410846 116 ntBASIC1.16□□□□□ -2.22
CLCN3P51790 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.16□□□□□ -2.22
CLCN3P51790 RNU7-45P-201ENST00000459460 63 ntBASIC1.16□□□□□ -2.22
CLCN3P51790 RPS23P4-201ENST00000487908 423 ntBASIC1.16□□□□□ -2.22
CLCN3P51790 RN7SKP19-201ENST00000516016 252 ntBASIC1.16□□□□□ -2.22
CLCN3P51790 RNU6-1234P-201ENST00000516877 103 ntBASIC1.16□□□□□ -2.22
CLCN3P51790 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.16□□□□□ -2.22
CLCN3P51790 SNORD58C-201ENST00000365223 64 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 SNORA19-201ENST00000384737 128 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 MIR19B1-201ENST00000384829 87 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 MIR520E-201ENST00000384867 87 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 HMGN1P33-201ENST00000432945 451 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 RNU7-107P-201ENST00000459121 61 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 RNU6-1211P-201ENST00000459179 105 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 RNU6-479P-201ENST00000516348 105 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 RNU6-781P-201ENST00000516377 101 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 RNU2-35P-201ENST00000516446 142 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 RNU6-1258P-201ENST00000516911 111 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 AL365222.1-201ENST00000614661 98 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.15□□□□□ -2.23
CLCN3P51790 MIR342-201ENST00000362212 99 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 RNU6-235P-201ENST00000362644 107 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 RNU6-690P-201ENST00000365242 106 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 Y_RNA.363-201ENST00000365529 113 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 RNU6-1117P-201ENST00000384525 104 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 Y_RNA.525-201ENST00000384570 113 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 MIR222-201ENST00000384992 110 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 RNU6-1168P-201ENST00000390831 104 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 MIR548I2-201ENST00000408348 149 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 RNU6-772P-201ENST00000516042 105 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 RNU7-70P-201ENST00000516941 66 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 MIR4305-201ENST00000583252 102 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 MIR3914-2-201ENST00000637339 95 ntBASIC1.14□□□□□ -2.23
CLCN3P51790 MIR103A2-201ENST00000362154 78 ntBASIC1.13□□□□□ -2.23
CLCN3P51790 SNORD115-2-201ENST00000362842 82 ntBASIC1.13□□□□□ -2.23
CLCN3P51790 SNORD115-20-201ENST00000365099 82 ntBASIC1.13□□□□□ -2.23
CLCN3P51790 Y_RNA.355-201ENST00000365462 98 ntBASIC1.13□□□□□ -2.23
CLCN3P51790 Y_RNA.508-201ENST00000384502 114 ntBASIC1.13□□□□□ -2.23
CLCN3P51790 RNU6-602P-201ENST00000411155 105 ntBASIC1.13□□□□□ -2.23
CLCN3P51790 AC008267.6-201ENST00000441664 139 ntBASIC1.13□□□□□ -2.23
CLCN3P51790 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.13□□□□□ -2.23
CLCN3P51790 RNU7-21P-201ENST00000459430 62 ntBASIC1.13□□□□□ -2.23
CLCN3P51790 AC133485.4-201ENST00000561835 220 ntBASIC1.13□□□□□ -2.23
CLCN3P51790 AC138907.4-201ENST00000570107 226 ntBASIC1.13□□□□□ -2.23
CLCN3P51790 AL137067.1-201ENST00000615933 120 ntBASIC1.13□□□□□ -2.23
CLCN3P51790 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
CLCN3P51790 MIR302B-201ENST00000362188 73 ntBASIC1.12□□□□□ -2.23
CLCN3P51790 RNU4-16P-201ENST00000364737 141 ntBASIC1.12□□□□□ -2.23
CLCN3P51790 Y_RNA.298-201ENST00000364960 107 ntBASIC1.12□□□□□ -2.23
CLCN3P51790 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
CLCN3P51790 RNA5SP261-201ENST00000410536 106 ntBASIC1.12□□□□□ -2.23
CLCN3P51790 Y_RNA.630-201ENST00000411370 108 ntBASIC1.12□□□□□ -2.23
CLCN3P51790 AC063976.4-201ENST00000421971 163 ntBASIC1.12□□□□□ -2.23
CLCN3P51790 AC244023.1-201ENST00000426884 112 ntBASIC1.12□□□□□ -2.23
CLCN3P51790 RPS29P1-201ENST00000465274 159 ntBASIC1.12□□□□□ -2.23
CLCN3P51790 RNU7-123P-201ENST00000515911 60 ntBASIC1.12□□□□□ -2.23
CLCN3P51790 RNU7-40P-201ENST00000516397 64 ntBASIC1.12□□□□□ -2.23
CLCN3P51790 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.12□□□□□ -2.23
CLCN3P51790 AC242498.1-201ENST00000604134 111 ntBASIC1.12□□□□□ -2.23
CLCN3P51790 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.12□□□□□ -2.23
CLCN3P51790 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CLCN3P51790 MIR377-201ENST00000362145 69 ntBASIC1.11□□□□□ -2.23
CLCN3P51790 SNORA22.1-201ENST00000362701 134 ntBASIC1.11□□□□□ -2.23
CLCN3P51790 SNORA25.3-201ENST00000363205 127 ntBASIC1.11□□□□□ -2.23
CLCN3P51790 RNU4-38P-201ENST00000364472 129 ntBASIC1.11□□□□□ -2.23
CLCN3P51790 Y_RNA.261-201ENST00000364631 102 ntBASIC1.11□□□□□ -2.23
CLCN3P51790 RNA5SP205-201ENST00000364653 136 ntBASIC1.11□□□□□ -2.23
CLCN3P51790 RNU6-580P-201ENST00000365159 107 ntBASIC1.11□□□□□ -2.23
CLCN3P51790 MT-TN-201ENST00000387400 73 ntBASIC1.11□□□□□ -2.23
CLCN3P51790 RNU6-613P-201ENST00000410412 108 ntBASIC1.11□□□□□ -2.23
CLCN3P51790 AL606753.1-201ENST00000427435 87 ntBASIC1.11□□□□□ -2.23
CLCN3P51790 RNU7-90P-201ENST00000459216 62 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms