Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
USP11P51784 SNORD116-10-201ENST00000363791 102 ntBASIC2.42□□□□□ -2.02
USP11P51784 Y_RNA.221-201ENST00000364248 96 ntBASIC2.42□□□□□ -2.02
USP11P51784 Y_RNA.437-201ENST00000384113 113 ntBASIC2.42□□□□□ -2.02
USP11P51784 MIR34C-201ENST00000384831 77 ntBASIC2.42□□□□□ -2.02
USP11P51784 RNU6-279P-201ENST00000391297 101 ntBASIC2.42□□□□□ -2.02
USP11P51784 RNU2-7P-201ENST00000410794 178 ntBASIC2.42□□□□□ -2.02
USP11P51784 MIR5002-201ENST00000584713 97 ntBASIC2.42□□□□□ -2.02
USP11P51784 FAM106DP-201ENST00000586416 501 ntBASIC2.42□□□□□ -2.02
USP11P51784 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.42□□□□□ -2.02
USP11P51784 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.42□□□□□ -2.02
USP11P51784 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
USP11P51784 Y_RNA.191-201ENST00000363972 113 ntBASIC2.41□□□□□ -2.02
USP11P51784 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
USP11P51784 AC245047.7-201ENST00000440265 293 ntBASIC2.41□□□□□ -2.02
USP11P51784 RPL23AP6-201ENST00000446637 472 ntBASIC2.41□□□□□ -2.02
USP11P51784 snoU13.27-201ENST00000459278 104 ntBASIC2.41□□□□□ -2.02
USP11P51784 snoU13.16-201ENST00000459350 104 ntBASIC2.41□□□□□ -2.02
USP11P51784 AC090255.1-201ENST00000495779 349 ntBASIC2.41□□□□□ -2.02
USP11P51784 SNORA74.3-201ENST00000517108 154 ntBASIC2.41□□□□□ -2.02
USP11P51784 MIR4769-201ENST00000584126 77 ntBASIC2.41□□□□□ -2.02
USP11P51784 AC006160.2-201ENST00000637708 154 ntBASIC2.41□□□□□ -2.02
USP11P51784 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.4□□□□□ -2.02
USP11P51784 MIR424-201ENST00000362227 98 ntBASIC2.4□□□□□ -2.03
USP11P51784 SNORA64-201ENST00000384674 134 ntBASIC2.4□□□□□ -2.03
USP11P51784 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.4□□□□□ -2.03
USP11P51784 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.4□□□□□ -2.03
USP11P51784 Z97988.1-201ENST00000637697 135 ntBASIC2.4□□□□□ -2.03
USP11P51784 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
USP11P51784 Y_RNA.4-201ENST00000362333 112 ntBASIC2.39□□□□□ -2.03
USP11P51784 SNORD38.1-201ENST00000363863 68 ntBASIC2.39□□□□□ -2.03
USP11P51784 AL023284.1-201ENST00000403956 276 ntBASIC2.39□□□□□ -2.03
USP11P51784 AL445685.2-201ENST00000422551 342 ntBASIC2.39□□□□□ -2.03
USP11P51784 SNORD67.1-201ENST00000516618 108 ntBASIC2.39□□□□□ -2.03
USP11P51784 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.39□□□□□ -2.03
USP11P51784 SNORA67.3-201ENST00000384366 140 ntBASIC2.38□□□□□ -2.03
USP11P51784 RNU6-602P-201ENST00000411155 105 ntBASIC2.38□□□□□ -2.03
USP11P51784 RPS27P21-201ENST00000486977 252 ntBASIC2.38□□□□□ -2.03
USP11P51784 RNU6-857P-201ENST00000515893 110 ntBASIC2.38□□□□□ -2.03
USP11P51784 MIR4529-201ENST00000578110 78 ntBASIC2.38□□□□□ -2.03
USP11P51784 MIR548BB-201ENST00000626714 66 ntBASIC2.38□□□□□ -2.03
USP11P51784 RNU6-1244P-201ENST00000363614 108 ntBASIC2.37□□□□□ -2.03
USP11P51784 Y_RNA.611-201ENST00000410682 108 ntBASIC2.37□□□□□ -2.03
USP11P51784 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.37□□□□□ -2.03
USP11P51784 RNU7-79P-201ENST00000516082 62 ntBASIC2.37□□□□□ -2.03
USP11P51784 RNU6-917P-201ENST00000516294 104 ntBASIC2.37□□□□□ -2.03
USP11P51784 SNORA31.25-201ENST00000517242 134 ntBASIC2.37□□□□□ -2.03
USP11P51784 AC020891.4-201ENST00000605745 93 ntBASIC2.37□□□□□ -2.03
USP11P51784 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
USP11P51784 RNU6-509P-201ENST00000363519 107 ntBASIC2.36□□□□□ -2.03
USP11P51784 Y_RNA.426-201ENST00000384068 113 ntBASIC2.36□□□□□ -2.03
USP11P51784 Y_RNA.448-201ENST00000384185 108 ntBASIC2.36□□□□□ -2.03
USP11P51784 RNU6-1321P-201ENST00000390905 107 ntBASIC2.36□□□□□ -2.03
USP11P51784 RNA5SP100-201ENST00000410903 110 ntBASIC2.36□□□□□ -2.03
USP11P51784 RNA5SP59-201ENST00000410922 110 ntBASIC2.36□□□□□ -2.03
USP11P51784 RNU6-1086P-201ENST00000410930 100 ntBASIC2.36□□□□□ -2.03
USP11P51784 snoU13.23-201ENST00000458863 104 ntBASIC2.36□□□□□ -2.03
USP11P51784 RNA5SP481-201ENST00000516814 122 ntBASIC2.36□□□□□ -2.03
USP11P51784 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.36□□□□□ -2.03
USP11P51784 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.36□□□□□ -2.03
USP11P51784 AC105081.1-201ENST00000617727 106 ntBASIC2.36□□□□□ -2.03
USP11P51784 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.36□□□□□ -2.03
USP11P51784 ZNF355P-201ENST00000427301 3216 ntBASIC2.36□□□□□ -2.03
USP11P51784 RNU6-633P-201ENST00000362612 103 ntBASIC2.35□□□□□ -2.03
USP11P51784 RNU6-1067P-201ENST00000384752 107 ntBASIC2.35□□□□□ -2.03
USP11P51784 MIR1289-2-201ENST00000408360 111 ntBASIC2.35□□□□□ -2.03
USP11P51784 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.35□□□□□ -2.03
USP11P51784 RNU6-613P-201ENST00000410412 108 ntBASIC2.35□□□□□ -2.03
USP11P51784 Y_RNA.609-201ENST00000410669 89 ntBASIC2.35□□□□□ -2.03
USP11P51784 RPS29P28-201ENST00000446439 141 ntBASIC2.35□□□□□ -2.03
USP11P51784 RNU7-137P-201ENST00000516788 62 ntBASIC2.35□□□□□ -2.03
USP11P51784 MIR548AO-201ENST00000579992 96 ntBASIC2.35□□□□□ -2.03
USP11P51784 MIR4764-201ENST00000580680 88 ntBASIC2.35□□□□□ -2.03
USP11P51784 AC008133.2-201ENST00000624540 351 ntBASIC2.35□□□□□ -2.03
USP11P51784 Y_RNA.567-201ENST00000384736 106 ntBASIC2.34□□□□□ -2.03
USP11P51784 AC019129.1-201ENST00000403786 261 ntBASIC2.34□□□□□ -2.03
USP11P51784 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
USP11P51784 MIR548G-201ENST00000408442 89 ntBASIC2.34□□□□□ -2.03
USP11P51784 RNU1-98P-201ENST00000458992 160 ntBASIC2.34□□□□□ -2.03
USP11P51784 DEFB122-202ENST00000569013 197 ntBASIC2.34□□□□□ -2.03
USP11P51784 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
USP11P51784 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.34□□□□□ -2.04
USP11P51784 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
USP11P51784 SNORD114-1-201ENST00000362705 72 ntBASIC2.33□□□□□ -2.04
USP11P51784 SNORD115-27-201ENST00000364430 82 ntBASIC2.33□□□□□ -2.04
USP11P51784 RNU6-203P-201ENST00000384038 104 ntBASIC2.33□□□□□ -2.04
USP11P51784 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
USP11P51784 RNU7-43P-201ENST00000516554 64 ntBASIC2.33□□□□□ -2.04
USP11P51784 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.33□□□□□ -2.04
USP11P51784 MIR4448-201ENST00000584360 86 ntBASIC2.33□□□□□ -2.04
USP11P51784 AL359851.1-201ENST00000569460 4997 ntBASIC2.32□□□□□ -2.04
USP11P51784 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.32□□□□□ -2.04
USP11P51784 SNORD114-10-201ENST00000363409 72 ntBASIC2.32□□□□□ -2.04
USP11P51784 RNA5SP37-201ENST00000365420 130 ntBASIC2.32□□□□□ -2.04
USP11P51784 Y_RNA.354-201ENST00000365448 111 ntBASIC2.32□□□□□ -2.04
USP11P51784 RNU6-652P-201ENST00000365488 107 ntBASIC2.32□□□□□ -2.04
USP11P51784 RNU4-52P-201ENST00000384209 138 ntBASIC2.32□□□□□ -2.04
USP11P51784 RNA5SP450-201ENST00000411206 102 ntBASIC2.32□□□□□ -2.04
USP11P51784 AL591806.2-201ENST00000433122 173 ntBASIC2.32□□□□□ -2.04
USP11P51784 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms