Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 RNY1P8-201ENST00000383970 114 ntBASIC0.4□□□□□ -2.35
GPC3P51654 RNA5SP237-201ENST00000410414 113 ntBASIC0.4□□□□□ -2.35
GPC3P51654 AL358176.2-201ENST00000425769 204 ntBASIC0.4□□□□□ -2.35
GPC3P51654 SNORD127-201ENST00000458892 86 ntBASIC0.4□□□□□ -2.35
GPC3P51654 MIR1273G-201ENST00000577677 100 ntBASIC0.4□□□□□ -2.35
GPC3P51654 MIR378D2-201ENST00000580636 98 ntBASIC0.4□□□□□ -2.35
GPC3P51654 SNORD92-201ENST00000585078 85 ntBASIC0.4□□□□□ -2.35
GPC3P51654 AC020891.4-201ENST00000605745 93 ntBASIC0.4□□□□□ -2.35
GPC3P51654 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
GPC3P51654 MIR18A-201ENST00000362310 71 ntBASIC0.39□□□□□ -2.35
GPC3P51654 Y_RNA.396-201ENST00000383949 103 ntBASIC0.39□□□□□ -2.35
GPC3P51654 Y_RNA.562-201ENST00000384695 113 ntBASIC0.39□□□□□ -2.35
GPC3P51654 RNU6-578P-201ENST00000390980 103 ntBASIC0.39□□□□□ -2.35
GPC3P51654 SNORA26.6-201ENST00000391256 115 ntBASIC0.39□□□□□ -2.35
GPC3P51654 SNORD100-201ENST00000408573 76 ntBASIC0.39□□□□□ -2.35
GPC3P51654 RNA5SP127-201ENST00000411051 133 ntBASIC0.39□□□□□ -2.35
GPC3P51654 AC090897.1-201ENST00000580909 226 ntBASIC0.39□□□□□ -2.35
GPC3P51654 uc_338.16-201ENST00000621804 95 ntBASIC0.39□□□□□ -2.35
GPC3P51654 AC091932.4-201ENST00000623386 200 ntBASIC0.39□□□□□ -2.35
GPC3P51654 SNORD12C-201ENST00000386307 89 ntBASIC0.38□□□□□ -2.35
GPC3P51654 Y_RNA.797-201ENST00000515977 94 ntBASIC0.38□□□□□ -2.35
GPC3P51654 RNU7-156P-201ENST00000517214 74 ntBASIC0.38□□□□□ -2.35
GPC3P51654 RNY4P28-201ENST00000365281 93 ntBASIC0.37□□□□□ -2.35
GPC3P51654 RNA5SP117-201ENST00000365294 118 ntBASIC0.37□□□□□ -2.35
GPC3P51654 MIR624-201ENST00000385217 97 ntBASIC0.37□□□□□ -2.35
GPC3P51654 RNU2-38P-201ENST00000410856 79 ntBASIC0.37□□□□□ -2.35
GPC3P51654 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.37□□□□□ -2.35
GPC3P51654 RNU7-102P-201ENST00000458948 62 ntBASIC0.37□□□□□ -2.35
GPC3P51654 MIR4643-201ENST00000577473 78 ntBASIC0.37□□□□□ -2.35
GPC3P51654 AC011921.3-201ENST00000605540 361 ntBASIC0.37□□□□□ -2.35
GPC3P51654 AL162730.1-201ENST00000605734 292 ntBASIC0.37□□□□□ -2.35
GPC3P51654 AL596211.1-201ENST00000569873 2277 ntBASIC0.37□□□□□ -2.35
GPC3P51654 AC090625.1-201ENST00000357130 210 ntBASIC0.36□□□□□ -2.35
GPC3P51654 MIR30D-201ENST00000362283 70 ntBASIC0.36□□□□□ -2.35
GPC3P51654 Y_RNA.76-201ENST00000362931 109 ntBASIC0.36□□□□□ -2.35
GPC3P51654 SNORD58.1-201ENST00000391313 66 ntBASIC0.36□□□□□ -2.35
GPC3P51654 RNU6-1190P-201ENST00000410811 104 ntBASIC0.36□□□□□ -2.35
GPC3P51654 MTCYBP9-201ENST00000431021 303 ntBASIC0.36□□□□□ -2.35
GPC3P51654 RNU6-561P-201ENST00000516222 102 ntBASIC0.36□□□□□ -2.35
GPC3P51654 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.36□□□□□ -2.35
GPC3P51654 Y_RNA.20-201ENST00000362479 113 ntBASIC0.35□□□□□ -2.35
GPC3P51654 RNU6-978P-201ENST00000364371 103 ntBASIC0.35□□□□□ -2.35
GPC3P51654 SNORA25.7-201ENST00000364375 127 ntBASIC0.35□□□□□ -2.35
GPC3P51654 Y_RNA.308-201ENST00000365043 101 ntBASIC0.35□□□□□ -2.35
GPC3P51654 RNU4-70P-201ENST00000384579 139 ntBASIC0.35□□□□□ -2.35
GPC3P51654 AC015818.7-201ENST00000428754 109 ntBASIC0.35□□□□□ -2.35
GPC3P51654 SEPT7P4-201ENST00000437076 306 ntBASIC0.35□□□□□ -2.35
GPC3P51654 AC087499.7-201ENST00000441958 109 ntBASIC0.35□□□□□ -2.35
GPC3P51654 AC002350.1-201ENST00000490759 375 ntBASIC0.35□□□□□ -2.35
GPC3P51654 RNU4-71P-201ENST00000516258 113 ntBASIC0.35□□□□□ -2.35
GPC3P51654 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
GPC3P51654 RNU6-448P-201ENST00000517052 107 ntBASIC0.35□□□□□ -2.35
GPC3P51654 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.35□□□□□ -2.35
GPC3P51654 AP003327.1-201ENST00000529684 127 ntBASIC0.35□□□□□ -2.35
GPC3P51654 AL360085.1-201ENST00000604713 532 ntBASIC0.35□□□□□ -2.35
GPC3P51654 uc_338.6-201ENST00000613544 171 ntBASIC0.35□□□□□ -2.35
GPC3P51654 AL662814.1-201ENST00000617364 121 ntBASIC0.35□□□□□ -2.35
GPC3P51654 AC092634.7-201ENST00000621022 103 ntBASIC0.35□□□□□ -2.35
GPC3P51654 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
GPC3P51654 Y_RNA.350-201ENST00000365409 98 ntBASIC0.34□□□□□ -2.36
GPC3P51654 RNU6-643P-201ENST00000384018 107 ntBASIC0.34□□□□□ -2.36
GPC3P51654 SNORD93-201ENST00000408813 74 ntBASIC0.34□□□□□ -2.36
GPC3P51654 SNORD71-201ENST00000411292 86 ntBASIC0.34□□□□□ -2.36
GPC3P51654 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.34□□□□□ -2.36
GPC3P51654 AC021613.1-201ENST00000623880 111 ntBASIC0.34□□□□□ -2.36
GPC3P51654 RNA5SP325-201ENST00000363756 130 ntBASIC0.33□□□□□ -2.36
GPC3P51654 Y_RNA.258-201ENST00000364613 105 ntBASIC0.33□□□□□ -2.36
GPC3P51654 RNU4-83P-201ENST00000410863 133 ntBASIC0.33□□□□□ -2.36
GPC3P51654 RNU5E-9P-201ENST00000411164 104 ntBASIC0.33□□□□□ -2.36
GPC3P51654 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.33□□□□□ -2.36
GPC3P51654 SNORA68.3-201ENST00000515906 83 ntBASIC0.33□□□□□ -2.36
GPC3P51654 RNU6-327P-201ENST00000516270 127 ntBASIC0.33□□□□□ -2.36
GPC3P51654 RNU6-1045P-201ENST00000516321 107 ntBASIC0.33□□□□□ -2.36
GPC3P51654 RNU2-4P-201ENST00000606190 192 ntBASIC0.33□□□□□ -2.36
GPC3P51654 MIR376A2-201ENST00000636782 80 ntBASIC0.33□□□□□ -2.36
GPC3P51654 MIR330-201ENST00000362196 94 ntBASIC0.32□□□□□ -2.36
GPC3P51654 MIRLET7D-201ENST00000362263 87 ntBASIC0.32□□□□□ -2.36
GPC3P51654 SNORA22.1-201ENST00000362701 134 ntBASIC0.32□□□□□ -2.36
GPC3P51654 RNU6-1099P-201ENST00000363533 107 ntBASIC0.32□□□□□ -2.36
GPC3P51654 SNORD27-201ENST00000363981 72 ntBASIC0.32□□□□□ -2.36
GPC3P51654 RNU6-275P-201ENST00000364910 107 ntBASIC0.32□□□□□ -2.36
GPC3P51654 Y_RNA.571-201ENST00000384753 98 ntBASIC0.32□□□□□ -2.36
GPC3P51654 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.32□□□□□ -2.36
GPC3P51654 Y_RNA.668-201ENST00000516233 93 ntBASIC0.32□□□□□ -2.36
GPC3P51654 RNU6-469P-201ENST00000516253 101 ntBASIC0.32□□□□□ -2.36
GPC3P51654 RNU6-135P-201ENST00000516769 101 ntBASIC0.32□□□□□ -2.36
GPC3P51654 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
GPC3P51654 MIR4719-201ENST00000585233 84 ntBASIC0.32□□□□□ -2.36
GPC3P51654 MIR6841-201ENST00000637129 72 ntBASIC0.32□□□□□ -2.36
GPC3P51654 MIR924-201ENST00000638017 53 ntBASIC0.32□□□□□ -2.36
GPC3P51654 Y_RNA.65-201ENST00000362846 100 ntBASIC0.31□□□□□ -2.36
GPC3P51654 Y_RNA.133-201ENST00000363428 110 ntBASIC0.31□□□□□ -2.36
GPC3P51654 Y_RNA.182-201ENST00000363880 111 ntBASIC0.31□□□□□ -2.36
GPC3P51654 RNU6-597P-201ENST00000365620 102 ntBASIC0.31□□□□□ -2.36
GPC3P51654 RNU6-493P-201ENST00000391321 108 ntBASIC0.31□□□□□ -2.36
GPC3P51654 Y_RNA.626-201ENST00000411288 95 ntBASIC0.31□□□□□ -2.36
GPC3P51654 RNU7-45P-201ENST00000459460 63 ntBASIC0.31□□□□□ -2.36
GPC3P51654 RNU6-863P-201ENST00000515989 104 ntBASIC0.31□□□□□ -2.36
GPC3P51654 RNU6-765P-201ENST00000516916 99 ntBASIC0.31□□□□□ -2.36
GPC3P51654 RNA5SP330-201ENST00000517096 96 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms