Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RNU6-1149P-201ENST00000516810 97 ntBASIC0.59□□□□□ -2.31
HMGCLP35914 AC020891.4-201ENST00000605745 93 ntBASIC0.59□□□□□ -2.31
HMGCLP35914 AC021613.1-201ENST00000623880 111 ntBASIC0.59□□□□□ -2.31
HMGCLP35914 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
HMGCLP35914 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
HMGCLP35914 RNU6-768P-201ENST00000384683 107 ntBASIC0.58□□□□□ -2.32
HMGCLP35914 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.58□□□□□ -2.32
HMGCLP35914 SNORD83.1-201ENST00000411362 77 ntBASIC0.58□□□□□ -2.32
HMGCLP35914 RNU7-56P-201ENST00000458744 62 ntBASIC0.58□□□□□ -2.32
HMGCLP35914 RNU7-120P-201ENST00000459334 63 ntBASIC0.58□□□□□ -2.32
HMGCLP35914 RNU7-45P-201ENST00000459460 63 ntBASIC0.58□□□□□ -2.32
HMGCLP35914 COX6CP6-201ENST00000490840 228 ntBASIC0.58□□□□□ -2.32
HMGCLP35914 RNU6-1271P-201ENST00000517049 105 ntBASIC0.58□□□□□ -2.32
HMGCLP35914 RNU6-1223P-201ENST00000517124 104 ntBASIC0.58□□□□□ -2.32
HMGCLP35914 MIR5000-201ENST00000577717 103 ntBASIC0.58□□□□□ -2.32
HMGCLP35914 MIR4676-201ENST00000583078 72 ntBASIC0.58□□□□□ -2.32
HMGCLP35914 RNU4-84P-201ENST00000364200 139 ntBASIC0.57□□□□□ -2.32
HMGCLP35914 Y_RNA.785-201ENST00000384290 109 ntBASIC0.57□□□□□ -2.32
HMGCLP35914 MIR573-201ENST00000384964 99 ntBASIC0.57□□□□□ -2.32
HMGCLP35914 RNA5SP220-201ENST00000516298 104 ntBASIC0.57□□□□□ -2.32
HMGCLP35914 MIR3646-201ENST00000578301 84 ntBASIC0.57□□□□□ -2.32
HMGCLP35914 MIR3152-201ENST00000579801 74 ntBASIC0.57□□□□□ -2.32
HMGCLP35914 AC104465.1-201ENST00000611365 139 ntBASIC0.57□□□□□ -2.32
HMGCLP35914 MTND5P32-201ENST00000560711 1802 ntBASIC0.57□□□□□ -2.32
HMGCLP35914 MIR302B-201ENST00000362188 73 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 RNU6-349P-201ENST00000362402 107 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 Y_RNA.52-201ENST00000362760 96 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 RNU6-1082P-201ENST00000364574 107 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 Y_RNA.297-201ENST00000364950 91 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 Y_RNA.552-201ENST00000384665 112 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 RNU1-119P-201ENST00000391122 165 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 AC096949.1-201ENST00000412047 152 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 SEPT7P4-201ENST00000437076 306 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 AC107027.2-201ENST00000512197 115 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 SNORD92-201ENST00000585078 85 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 AC078938.1-201ENST00000620993 318 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 AC010332.2-201ENST00000613083 1904 ntBASIC0.56□□□□□ -2.32
HMGCLP35914 RNU1-133P-201ENST00000364867 167 ntBASIC0.55□□□□□ -2.32
HMGCLP35914 Y_RNA.337-201ENST00000365312 102 ntBASIC0.55□□□□□ -2.32
HMGCLP35914 MIR125B2-201ENST00000385128 89 ntBASIC0.55□□□□□ -2.32
HMGCLP35914 RNU6-239P-201ENST00000390990 99 ntBASIC0.55□□□□□ -2.32
HMGCLP35914 RNU5E-9P-201ENST00000411164 104 ntBASIC0.55□□□□□ -2.32
HMGCLP35914 RNA5SP247-201ENST00000411181 105 ntBASIC0.55□□□□□ -2.32
HMGCLP35914 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.55□□□□□ -2.32
HMGCLP35914 RNU7-185P-201ENST00000459215 60 ntBASIC0.55□□□□□ -2.32
HMGCLP35914 AC022559.1-201ENST00000520905 205 ntBASIC0.55□□□□□ -2.32
HMGCLP35914 MIR4771-2-201ENST00000577758 74 ntBASIC0.55□□□□□ -2.32
HMGCLP35914 MIR4771-1-201ENST00000582617 74 ntBASIC0.55□□□□□ -2.32
HMGCLP35914 AL662814.1-201ENST00000617364 121 ntBASIC0.55□□□□□ -2.32
HMGCLP35914 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
HMGCLP35914 MIR6734-201ENST00000621166 68 ntBASIC0.55□□□□□ -2.32
HMGCLP35914 AL596211.1-201ENST00000569873 2277 ntBASIC0.55□□□□□ -2.32
HMGCLP35914 MIR342-201ENST00000362212 99 ntBASIC0.54□□□□□ -2.32
HMGCLP35914 SNORA22.1-201ENST00000362701 134 ntBASIC0.54□□□□□ -2.32
HMGCLP35914 SNORD115-2-201ENST00000362842 82 ntBASIC0.54□□□□□ -2.32
HMGCLP35914 RNU6-682P-201ENST00000363843 106 ntBASIC0.54□□□□□ -2.32
HMGCLP35914 SNORD115-20-201ENST00000365099 82 ntBASIC0.54□□□□□ -2.32
HMGCLP35914 Y_RNA.476-201ENST00000384347 108 ntBASIC0.54□□□□□ -2.32
HMGCLP35914 Y_RNA.515-201ENST00000384535 112 ntBASIC0.54□□□□□ -2.32
HMGCLP35914 SNORA75.5-201ENST00000391291 81 ntBASIC0.54□□□□□ -2.32
HMGCLP35914 RNU6-1135P-201ENST00000411083 103 ntBASIC0.54□□□□□ -2.32
HMGCLP35914 RNU6-138P-201ENST00000515952 107 ntBASIC0.54□□□□□ -2.32
HMGCLP35914 RNU2-60P-201ENST00000517290 128 ntBASIC0.54□□□□□ -2.32
HMGCLP35914 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.54□□□□□ -2.32
HMGCLP35914 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.54□□□□□ -2.32
HMGCLP35914 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.54□□□□□ -2.32
HMGCLP35914 Y_RNA.116-201ENST00000363292 103 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 RNU6-1318P-201ENST00000365389 103 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 RNU6-1336P-201ENST00000383886 109 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 RNU6-42P-201ENST00000384165 107 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 RNY1P6-201ENST00000384193 109 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 Y_RNA.497-201ENST00000384447 98 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 MIR938-201ENST00000401216 83 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 SNORD100-201ENST00000408573 76 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 RNU6-893P-201ENST00000458841 100 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 RNU6-977P-201ENST00000516411 103 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 RNA5SP121-201ENST00000516537 101 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 RNU6-1258P-201ENST00000516911 111 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 RNU6-388P-201ENST00000517012 105 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 RNU6-389P-201ENST00000517048 105 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 Y_RNA.757-201ENST00000578934 114 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 AC090897.1-201ENST00000580909 226 ntBASIC0.53□□□□□ -2.32
HMGCLP35914 Y_RNA.251-201ENST00000364551 99 ntBASIC0.52□□□□□ -2.33
HMGCLP35914 Y_RNA.257-201ENST00000364596 102 ntBASIC0.52□□□□□ -2.33
HMGCLP35914 RNU4-45P-201ENST00000365469 141 ntBASIC0.52□□□□□ -2.33
HMGCLP35914 RNA5SP144-201ENST00000410846 116 ntBASIC0.52□□□□□ -2.33
HMGCLP35914 AC015818.7-201ENST00000428754 109 ntBASIC0.52□□□□□ -2.33
HMGCLP35914 AC092628.1-201ENST00000436250 252 ntBASIC0.52□□□□□ -2.33
HMGCLP35914 AC087499.7-201ENST00000441958 109 ntBASIC0.52□□□□□ -2.33
HMGCLP35914 AP002392.1-201ENST00000537692 208 ntBASIC0.52□□□□□ -2.33
HMGCLP35914 SNORA4-201ENST00000584302 138 ntBASIC0.52□□□□□ -2.33
HMGCLP35914 AC011603.4-201ENST00000611325 277 ntBASIC0.52□□□□□ -2.33
HMGCLP35914 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
HMGCLP35914 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 Y_RNA.29-201ENST00000362570 113 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 Y_RNA.42-201ENST00000362660 108 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 RNA5SP499-201ENST00000363982 119 ntBASIC0.51□□□□□ -2.33
HMGCLP35914 Y_RNA.521-201ENST00000384560 114 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms