Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.76□□□□□ -2.53
RPA3P35244 RNU6-484P-201ENST00000384016 107 ntBASIC-0.76□□□□□ -2.53
RPA3P35244 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.76□□□□□ -2.53
RPA3P35244 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.76□□□□□ -2.53
RPA3P35244 SNORD110-201ENST00000408189 75 ntBASIC-0.76□□□□□ -2.53
RPA3P35244 AL589823.1-201ENST00000429577 183 ntBASIC-0.76□□□□□ -2.53
RPA3P35244 RNU7-79P-201ENST00000516082 62 ntBASIC-0.76□□□□□ -2.53
RPA3P35244 MIR4493-201ENST00000584016 73 ntBASIC-0.76□□□□□ -2.53
RPA3P35244 MIR4263-201ENST00000584745 83 ntBASIC-0.76□□□□□ -2.53
RPA3P35244 AC006006.1-201ENST00000603082 144 ntBASIC-0.76□□□□□ -2.53
RPA3P35244 AL138825.1-201ENST00000618587 192 ntBASIC-0.76□□□□□ -2.53
RPA3P35244 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.76□□□□□ -2.53
RPA3P35244 MIR101-1-201ENST00000362265 75 ntBASIC-0.77□□□□□ -2.53
RPA3P35244 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.77□□□□□ -2.53
RPA3P35244 AC244250.2-201ENST00000418731 148 ntBASIC-0.77□□□□□ -2.53
RPA3P35244 BX276092.1-201ENST00000427368 251 ntBASIC-0.77□□□□□ -2.53
RPA3P35244 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.77□□□□□ -2.53
RPA3P35244 SNORA20.3-201ENST00000516880 132 ntBASIC-0.77□□□□□ -2.53
RPA3P35244 NAMPTP3-201ENST00000569273 224 ntBASIC-0.77□□□□□ -2.53
RPA3P35244 MIR3129-201ENST00000581095 76 ntBASIC-0.77□□□□□ -2.53
RPA3P35244 MIR5197-201ENST00000583721 112 ntBASIC-0.77□□□□□ -2.53
RPA3P35244 AC025253.1-201ENST00000613623 543 ntBASIC-0.77□□□□□ -2.53
RPA3P35244 AL606534.2-204ENST00000635008 178 ntBASIC-0.77□□□□□ -2.53
RPA3P35244 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.78□□□□□ -2.53
RPA3P35244 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.78□□□□□ -2.53
RPA3P35244 RNU6-811P-201ENST00000384069 107 ntBASIC-0.78□□□□□ -2.53
RPA3P35244 SNORD116-29-201ENST00000384516 83 ntBASIC-0.78□□□□□ -2.53
RPA3P35244 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.78□□□□□ -2.53
RPA3P35244 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.78□□□□□ -2.53
RPA3P35244 AL356055.1-201ENST00000602528 446 ntBASIC-0.78□□□□□ -2.53
RPA3P35244 AC080013.6-201ENST00000606185 215 ntBASIC-0.78□□□□□ -2.53
RPA3P35244 AC105081.1-201ENST00000617727 106 ntBASIC-0.78□□□□□ -2.53
RPA3P35244 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.79□□□□□ -2.54
RPA3P35244 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.79□□□□□ -2.54
RPA3P35244 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.79□□□□□ -2.54
RPA3P35244 MIR516B1-201ENST00000385211 90 ntBASIC-0.79□□□□□ -2.54
RPA3P35244 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.79□□□□□ -2.54
RPA3P35244 RNY4P36-201ENST00000391116 96 ntBASIC-0.79□□□□□ -2.54
RPA3P35244 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.79□□□□□ -2.54
RPA3P35244 RNU2-55P-201ENST00000411146 174 ntBASIC-0.79□□□□□ -2.54
RPA3P35244 RNA5SP153-201ENST00000516498 76 ntBASIC-0.79□□□□□ -2.54
RPA3P35244 MIR5688-201ENST00000580619 83 ntBASIC-0.79□□□□□ -2.54
RPA3P35244 MIR6507-201ENST00000613630 70 ntBASIC-0.79□□□□□ -2.54
RPA3P35244 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.79□□□□□ -2.54
RPA3P35244 MIR655-201ENST00000362159 97 ntBASIC-0.8□□□□□ -2.54
RPA3P35244 RNU6-662P-201ENST00000384253 104 ntBASIC-0.8□□□□□ -2.54
RPA3P35244 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.8□□□□□ -2.54
RPA3P35244 RNU6-284P-201ENST00000411105 106 ntBASIC-0.8□□□□□ -2.54
RPA3P35244 MTND4LP11-201ENST00000422184 280 ntBASIC-0.8□□□□□ -2.54
RPA3P35244 RNA5SP484-201ENST00000458857 111 ntBASIC-0.8□□□□□ -2.54
RPA3P35244 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.8□□□□□ -2.54
RPA3P35244 AC097639.2-201ENST00000603159 172 ntBASIC-0.8□□□□□ -2.54
RPA3P35244 AL008718.3-201ENST00000610217 321 ntBASIC-0.8□□□□□ -2.54
RPA3P35244 RNU4-90P-201ENST00000362773 141 ntBASIC-0.81□□□□□ -2.54
RPA3P35244 RNU6-623P-201ENST00000363143 105 ntBASIC-0.81□□□□□ -2.54
RPA3P35244 RNA5SP98-201ENST00000363158 137 ntBASIC-0.81□□□□□ -2.54
RPA3P35244 SNORD114-11-201ENST00000363738 75 ntBASIC-0.81□□□□□ -2.54
RPA3P35244 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.81□□□□□ -2.54
RPA3P35244 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.81□□□□□ -2.54
RPA3P35244 SNRPGP8-201ENST00000454064 226 ntBASIC-0.81□□□□□ -2.54
RPA3P35244 SNORA25.13-201ENST00000516395 103 ntBASIC-0.81□□□□□ -2.54
RPA3P35244 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.81□□□□□ -2.54
RPA3P35244 AC040926.1-201ENST00000530195 238 ntBASIC-0.81□□□□□ -2.54
RPA3P35244 AC084781.2-201ENST00000615568 161 ntBASIC-0.81□□□□□ -2.54
RPA3P35244 MIR376A1-201ENST00000616574 68 ntBASIC-0.81□□□□□ -2.54
RPA3P35244 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.82□□□□□ -2.54
RPA3P35244 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.82□□□□□ -2.54
RPA3P35244 RNA5SP205-201ENST00000364653 136 ntBASIC-0.82□□□□□ -2.54
RPA3P35244 RNU4-16P-201ENST00000364737 141 ntBASIC-0.82□□□□□ -2.54
RPA3P35244 Z83846.1-201ENST00000446798 265 ntBASIC-0.82□□□□□ -2.54
RPA3P35244 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.82□□□□□ -2.54
RPA3P35244 RNU6-865P-201ENST00000364772 107 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 U8.6-201ENST00000364939 135 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 RNU1-115P-201ENST00000365329 160 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 RNU6-480P-201ENST00000384332 107 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 RNU4-70P-201ENST00000384579 139 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 MT-TT-201ENST00000387460 66 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 AC114755.3-201ENST00000481111 251 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 RNU7-70P-201ENST00000516941 66 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 RNU7-35P-201ENST00000517174 62 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 AL590491.3-201ENST00000610731 82 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 RN7SL660P-201ENST00000614852 299 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 snoU18.1-201ENST00000629629 71 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 AC073869.6-201ENST00000640656 341 ntBASIC-0.83□□□□□ -2.54
RPA3P35244 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.84□□□□□ -2.54
RPA3P35244 RNY1P2-201ENST00000364820 117 ntBASIC-0.84□□□□□ -2.54
RPA3P35244 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.84□□□□□ -2.54
RPA3P35244 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.84□□□□□ -2.54
RPA3P35244 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.84□□□□□ -2.54
RPA3P35244 AL731563.1-201ENST00000442202 214 ntBASIC-0.84□□□□□ -2.54
RPA3P35244 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.84□□□□□ -2.54
RPA3P35244 MIR548H5-201ENST00000580314 60 ntBASIC-0.84□□□□□ -2.54
RPA3P35244 AC092794.1-201ENST00000612734 582 ntBASIC-0.84□□□□□ -2.54
RPA3P35244 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.85□□□□□ -2.55
RPA3P35244 RNU6-509P-201ENST00000363519 107 ntBASIC-0.85□□□□□ -2.55
RPA3P35244 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.85□□□□□ -2.55
RPA3P35244 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.85□□□□□ -2.55
RPA3P35244 RNA5SP451-201ENST00000410588 110 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms