Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RNU6-47P-201ENST00000383866 107 ntBASIC-1.04□□□□□ -2.58
CASQ1P31415 MIR526A2-201ENST00000390198 65 ntBASIC-1.04□□□□□ -2.58
CASQ1P31415 RNU6-699P-201ENST00000517081 110 ntBASIC-1.04□□□□□ -2.58
CASQ1P31415 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.04□□□□□ -2.58
CASQ1P31415 MTND5P40-201ENST00000559945 246 ntBASIC-1.04□□□□□ -2.58
CASQ1P31415 MIR4802-201ENST00000581881 80 ntBASIC-1.04□□□□□ -2.58
CASQ1P31415 AC007485.1-201ENST00000616755 206 ntBASIC-1.04□□□□□ -2.58
CASQ1P31415 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 RNU6-1248P-201ENST00000391096 64 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 RNU6-735P-201ENST00000410612 107 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 MTND1P29-201ENST00000448112 647 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 AC097635.1-201ENST00000450678 155 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 SNRPGP8-201ENST00000454064 226 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 HSPE1P25-201ENST00000455484 251 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 Y_RNA.673-201ENST00000516306 88 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 RNU6-358P-201ENST00000516564 75 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 RNU6-126P-201ENST00000516685 103 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 MIR4493-201ENST00000584016 73 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 AL121655.1-201ENST00000605811 308 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 AL008718.3-201ENST00000610217 321 ntBASIC-1.05□□□□□ -2.58
CASQ1P31415 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.06□□□□□ -2.58
CASQ1P31415 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.06□□□□□ -2.58
CASQ1P31415 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.06□□□□□ -2.58
CASQ1P31415 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.06□□□□□ -2.58
CASQ1P31415 AL445193.1-201ENST00000441183 141 ntBASIC-1.06□□□□□ -2.58
CASQ1P31415 MIR1270-201ENST00000459320 83 ntBASIC-1.06□□□□□ -2.58
CASQ1P31415 AC006504.6-201ENST00000590142 199 ntBASIC-1.06□□□□□ -2.58
CASQ1P31415 SNORD113-5-201ENST00000607261 78 ntBASIC-1.06□□□□□ -2.58
CASQ1P31415 MIR6779-201ENST00000617283 64 ntBASIC-1.06□□□□□ -2.58
CASQ1P31415 MIR3688-2-201ENST00000636963 87 ntBASIC-1.06□□□□□ -2.58
CASQ1P31415 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 SNORA32-201ENST00000384072 121 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 RNU6-429P-201ENST00000384582 108 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 MIR519E-201ENST00000385075 84 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 MT-TT-201ENST00000387460 66 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 RNU6-507P-201ENST00000516045 100 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 RNA5SP153-201ENST00000516498 76 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 RNU7-30P-201ENST00000516835 62 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 SCARNA15-202ENST00000516881 127 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.07□□□□□ -2.58
CASQ1P31415 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 YWHAEP2-201ENST00000580066 112 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 RNU6-86P-201ENST00000606534 107 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 AC103591.3-201ENST00000608684 209 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 AC098479.1-201ENST00000609225 154 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 AC145423.2-201ENST00000610631 239 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 AC069503.3-201ENST00000618674 145 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 uc_338.10-201ENST00000621872 182 ntBASIC-1.07□□□□□ -2.58
CASQ1P31415 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.08□□□□□ -2.58
CASQ1P31415 RNU6-1184P-201ENST00000384588 108 ntBASIC-1.08□□□□□ -2.58
CASQ1P31415 SNORA53-201ENST00000391141 249 ntBASIC-1.08□□□□□ -2.58
CASQ1P31415 SEPT14P8-201ENST00000508026 178 ntBASIC-1.08□□□□□ -2.58
CASQ1P31415 Y_RNA.691-201ENST00000516611 103 ntBASIC-1.08□□□□□ -2.58
CASQ1P31415 AC245505.1-201ENST00000556398 224 ntBASIC-1.08□□□□□ -2.58
CASQ1P31415 MIR5589-201ENST00000579442 60 ntBASIC-1.08□□□□□ -2.58
CASQ1P31415 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.08□□□□□ -2.58
CASQ1P31415 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.09□□□□□ -2.58
CASQ1P31415 SNORD116-1-201ENST00000384335 95 ntBASIC-1.09□□□□□ -2.58
CASQ1P31415 MIR635-201ENST00000384830 98 ntBASIC-1.09□□□□□ -2.58
CASQ1P31415 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.09□□□□□ -2.58
CASQ1P31415 RNU2-55P-201ENST00000411146 174 ntBASIC-1.09□□□□□ -2.58
CASQ1P31415 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.09□□□□□ -2.58
CASQ1P31415 AC099799.1-201ENST00000439809 192 ntBASIC-1.09□□□□□ -2.58
CASQ1P31415 RNU7-195P-201ENST00000458793 62 ntBASIC-1.09□□□□□ -2.58
CASQ1P31415 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.09□□□□□ -2.58
CASQ1P31415 SNORD38.3-201ENST00000516599 73 ntBASIC-1.09□□□□□ -2.58
CASQ1P31415 AC040926.1-201ENST00000530195 238 ntBASIC-1.09□□□□□ -2.58
CASQ1P31415 AC024909.2-201ENST00000553035 286 ntBASIC-1.09□□□□□ -2.58
CASQ1P31415 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.09□□□□□ -2.58
CASQ1P31415 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.1□□□□□ -2.59
CASQ1P31415 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
CASQ1P31415 RNA5SP144-201ENST00000410846 116 ntBASIC-1.1□□□□□ -2.59
CASQ1P31415 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.1□□□□□ -2.59
CASQ1P31415 AC098614.3-201ENST00000438957 440 ntBASIC-1.1□□□□□ -2.59
CASQ1P31415 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.1□□□□□ -2.59
CASQ1P31415 AC069439.1-201ENST00000494739 167 ntBASIC-1.1□□□□□ -2.59
CASQ1P31415 RNU7-13P-201ENST00000516413 62 ntBASIC-1.1□□□□□ -2.59
CASQ1P31415 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.1□□□□□ -2.59
CASQ1P31415 AC104985.2-201ENST00000620598 500 ntBASIC-1.1□□□□□ -2.59
CASQ1P31415 SNORD114-29-201ENST00000364819 70 ntBASIC-1.11□□□□□ -2.59
CASQ1P31415 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.11□□□□□ -2.59
CASQ1P31415 RNU6-662P-201ENST00000384253 104 ntBASIC-1.11□□□□□ -2.59
CASQ1P31415 RNU6-154P-201ENST00000384306 106 ntBASIC-1.11□□□□□ -2.59
CASQ1P31415 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.11□□□□□ -2.59
CASQ1P31415 MIR519A1-201ENST00000385257 85 ntBASIC-1.11□□□□□ -2.59
CASQ1P31415 SNORA49-201ENST00000386157 136 ntBASIC-1.11□□□□□ -2.59
CASQ1P31415 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.11□□□□□ -2.59
CASQ1P31415 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.11□□□□□ -2.59
CASQ1P31415 SNORD58B-201ENST00000607313 66 ntBASIC-1.11□□□□□ -2.59
CASQ1P31415 MIR6851-201ENST00000617060 67 ntBASIC-1.11□□□□□ -2.59
CASQ1P31415 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.12□□□□□ -2.59
CASQ1P31415 SNORD113-8-201ENST00000363497 74 ntBASIC-1.12□□□□□ -2.59
CASQ1P31415 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.12□□□□□ -2.59
CASQ1P31415 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.12□□□□□ -2.59
CASQ1P31415 MIR1912-201ENST00000410389 80 ntBASIC-1.12□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms