Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.83□□□□□ -2.54
HLA-DMBP28068 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.83□□□□□ -2.54
HLA-DMBP28068 MIR626-201ENST00000385032 94 ntBASIC-0.83□□□□□ -2.54
HLA-DMBP28068 MIR559-201ENST00000385188 96 ntBASIC-0.83□□□□□ -2.54
HLA-DMBP28068 MIR526A2-201ENST00000390198 65 ntBASIC-0.83□□□□□ -2.54
HLA-DMBP28068 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
HLA-DMBP28068 RNU2-55P-201ENST00000411146 174 ntBASIC-0.83□□□□□ -2.54
HLA-DMBP28068 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.83□□□□□ -2.54
HLA-DMBP28068 RNU7-79P-201ENST00000516082 62 ntBASIC-0.83□□□□□ -2.54
HLA-DMBP28068 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.83□□□□□ -2.54
HLA-DMBP28068 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.83□□□□□ -2.54
HLA-DMBP28068 AC097639.2-201ENST00000603159 172 ntBASIC-0.83□□□□□ -2.54
HLA-DMBP28068 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.83□□□□□ -2.54
HLA-DMBP28068 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.84□□□□□ -2.54
HLA-DMBP28068 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.84□□□□□ -2.54
HLA-DMBP28068 RNU6-484P-201ENST00000384016 107 ntBASIC-0.84□□□□□ -2.54
HLA-DMBP28068 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.84□□□□□ -2.54
HLA-DMBP28068 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.84□□□□□ -2.54
HLA-DMBP28068 RNA5SP153-201ENST00000516498 76 ntBASIC-0.84□□□□□ -2.54
HLA-DMBP28068 MIR548H5-201ENST00000580314 60 ntBASIC-0.84□□□□□ -2.54
HLA-DMBP28068 MIR5197-201ENST00000583721 112 ntBASIC-0.84□□□□□ -2.54
HLA-DMBP28068 AC105081.1-201ENST00000617727 106 ntBASIC-0.84□□□□□ -2.54
HLA-DMBP28068 U6.109-201ENST00000636749 87 ntBASIC-0.84□□□□□ -2.54
HLA-DMBP28068 MIR409-201ENST00000362237 79 ntBASIC-0.85□□□□□ -2.55
HLA-DMBP28068 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.85□□□□□ -2.55
HLA-DMBP28068 RNU7-30P-201ENST00000516835 62 ntBASIC-0.85□□□□□ -2.55
HLA-DMBP28068 RNU7-35P-201ENST00000517174 62 ntBASIC-0.85□□□□□ -2.55
HLA-DMBP28068 AP001328.1-201ENST00000528550 176 ntBASIC-0.85□□□□□ -2.55
HLA-DMBP28068 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.85□□□□□ -2.55
HLA-DMBP28068 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.86□□□□□ -2.55
HLA-DMBP28068 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.86□□□□□ -2.55
HLA-DMBP28068 RNU6-449P-201ENST00000383914 107 ntBASIC-0.86□□□□□ -2.55
HLA-DMBP28068 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.86□□□□□ -2.55
HLA-DMBP28068 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.86□□□□□ -2.55
HLA-DMBP28068 RNU6-893P-201ENST00000458841 100 ntBASIC-0.86□□□□□ -2.55
HLA-DMBP28068 MTND4P17-201ENST00000470444 350 ntBASIC-0.86□□□□□ -2.55
HLA-DMBP28068 MRPS35P2-201ENST00000508242 191 ntBASIC-0.86□□□□□ -2.55
HLA-DMBP28068 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.86□□□□□ -2.55
HLA-DMBP28068 RNA5SP66-201ENST00000517178 101 ntBASIC-0.86□□□□□ -2.55
HLA-DMBP28068 AC103591.3-201ENST00000608684 209 ntBASIC-0.86□□□□□ -2.55
HLA-DMBP28068 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.86□□□□□ -2.55
HLA-DMBP28068 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.86□□□□□ -2.55
HLA-DMBP28068 U4.5-201ENST00000617137 123 ntBASIC-0.86□□□□□ -2.55
HLA-DMBP28068 AP000770.2-201ENST00000623694 100 ntBASIC-0.86□□□□□ -2.55
HLA-DMBP28068 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.87□□□□□ -2.55
HLA-DMBP28068 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.87□□□□□ -2.55
HLA-DMBP28068 Y_RNA.194-201ENST00000363985 102 ntBASIC-0.87□□□□□ -2.55
HLA-DMBP28068 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.87□□□□□ -2.55
HLA-DMBP28068 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.87□□□□□ -2.55
HLA-DMBP28068 U8.20-201ENST00000459445 131 ntBASIC-0.87□□□□□ -2.55
HLA-DMBP28068 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.87□□□□□ -2.55
HLA-DMBP28068 RNU6-699P-201ENST00000517081 110 ntBASIC-0.87□□□□□ -2.55
HLA-DMBP28068 AC024909.2-201ENST00000553035 286 ntBASIC-0.87□□□□□ -2.55
HLA-DMBP28068 MIR3681-201ENST00000580089 72 ntBASIC-0.87□□□□□ -2.55
HLA-DMBP28068 RNU7-10P-201ENST00000607194 63 ntBASIC-0.87□□□□□ -2.55
HLA-DMBP28068 AC007485.1-201ENST00000616755 206 ntBASIC-0.87□□□□□ -2.55
HLA-DMBP28068 RNY1P2-201ENST00000364820 117 ntBASIC-0.88□□□□□ -2.55
HLA-DMBP28068 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.88□□□□□ -2.55
HLA-DMBP28068 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.88□□□□□ -2.55
HLA-DMBP28068 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.88□□□□□ -2.55
HLA-DMBP28068 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.88□□□□□ -2.55
HLA-DMBP28068 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.88□□□□□ -2.55
HLA-DMBP28068 RPS29P30-201ENST00000600975 111 ntBASIC-0.88□□□□□ -2.55
HLA-DMBP28068 AC098479.1-201ENST00000609225 154 ntBASIC-0.88□□□□□ -2.55
HLA-DMBP28068 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.88□□□□□ -2.55
HLA-DMBP28068 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.89□□□□□ -2.55
HLA-DMBP28068 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.89□□□□□ -2.55
HLA-DMBP28068 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.89□□□□□ -2.55
HLA-DMBP28068 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.89□□□□□ -2.55
HLA-DMBP28068 PMCHL1-202ENST00000423102 261 ntBASIC-0.89□□□□□ -2.55
HLA-DMBP28068 Y_RNA.653-201ENST00000459091 95 ntBASIC-0.89□□□□□ -2.55
HLA-DMBP28068 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.89□□□□□ -2.55
HLA-DMBP28068 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.9□□□□□ -2.55
HLA-DMBP28068 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.9□□□□□ -2.55
HLA-DMBP28068 RNY3P5-201ENST00000384127 102 ntBASIC-0.9□□□□□ -2.55
HLA-DMBP28068 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.9□□□□□ -2.55
HLA-DMBP28068 RNU7-188P-201ENST00000517063 64 ntBASIC-0.9□□□□□ -2.55
HLA-DMBP28068 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.9□□□□□ -2.55
HLA-DMBP28068 MIR3920-201ENST00000581751 86 ntBASIC-0.9□□□□□ -2.55
HLA-DMBP28068 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.9□□□□□ -2.55
HLA-DMBP28068 AC133104.2-201ENST00000615272 193 ntBASIC-0.9□□□□□ -2.55
HLA-DMBP28068 AC002553.4-201ENST00000616896 331 ntBASIC-0.9□□□□□ -2.55
HLA-DMBP28068 AL138825.1-201ENST00000618587 192 ntBASIC-0.9□□□□□ -2.55
HLA-DMBP28068 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.91□□□□□ -2.56
HLA-DMBP28068 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.91□□□□□ -2.56
HLA-DMBP28068 RNU6-47P-201ENST00000383866 107 ntBASIC-0.91□□□□□ -2.56
HLA-DMBP28068 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.91□□□□□ -2.56
HLA-DMBP28068 RNU4-70P-201ENST00000384579 139 ntBASIC-0.91□□□□□ -2.56
HLA-DMBP28068 RNU6-429P-201ENST00000384582 108 ntBASIC-0.91□□□□□ -2.56
HLA-DMBP28068 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.91□□□□□ -2.56
HLA-DMBP28068 MIR599-201ENST00000385069 95 ntBASIC-0.91□□□□□ -2.56
HLA-DMBP28068 AL603914.1-201ENST00000401964 204 ntBASIC-0.91□□□□□ -2.56
HLA-DMBP28068 AC097635.1-201ENST00000450678 155 ntBASIC-0.91□□□□□ -2.56
HLA-DMBP28068 RNU7-74P-201ENST00000459104 62 ntBASIC-0.91□□□□□ -2.56
HLA-DMBP28068 SNORA40.14-201ENST00000516543 86 ntBASIC-0.91□□□□□ -2.56
HLA-DMBP28068 RNA5SP169-201ENST00000517268 117 ntBASIC-0.91□□□□□ -2.56
HLA-DMBP28068 Y_RNA.166-201ENST00000363730 102 ntBASIC-0.92□□□□□ -2.56
HLA-DMBP28068 RNU1-141P-201ENST00000364623 158 ntBASIC-0.92□□□□□ -2.56
HLA-DMBP28068 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.92□□□□□ -2.56
HLA-DMBP28068 MIR181B2-201ENST00000385004 89 ntBASIC-0.92□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms