Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
RPA1P27694 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.58□□□□□ -2.32
RPA1P27694 MIR377-201ENST00000362145 69 ntBASIC0.58□□□□□ -2.32
RPA1P27694 Y_RNA.121-201ENST00000363309 113 ntBASIC0.58□□□□□ -2.32
RPA1P27694 RNU1-133P-201ENST00000364867 167 ntBASIC0.58□□□□□ -2.32
RPA1P27694 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
RPA1P27694 RNU6-1292P-201ENST00000383856 107 ntBASIC0.58□□□□□ -2.32
RPA1P27694 RNU6-1237P-201ENST00000384777 107 ntBASIC0.58□□□□□ -2.32
RPA1P27694 SNORA26-201ENST00000391286 122 ntBASIC0.58□□□□□ -2.32
RPA1P27694 Y_RNA.618-201ENST00000410949 107 ntBASIC0.58□□□□□ -2.32
RPA1P27694 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.58□□□□□ -2.32
RPA1P27694 snoU13.2-201ENST00000459201 104 ntBASIC0.58□□□□□ -2.32
RPA1P27694 RNU6-138P-201ENST00000515952 107 ntBASIC0.58□□□□□ -2.32
RPA1P27694 RNU4-54P-201ENST00000516428 129 ntBASIC0.58□□□□□ -2.32
RPA1P27694 SNORD116-25-201ENST00000516517 92 ntBASIC0.58□□□□□ -2.32
RPA1P27694 MIR4676-201ENST00000583078 72 ntBASIC0.58□□□□□ -2.32
RPA1P27694 MIR4264-201ENST00000583520 66 ntBASIC0.58□□□□□ -2.32
RPA1P27694 RNA5SP347-201ENST00000362445 119 ntBASIC0.57□□□□□ -2.32
RPA1P27694 Y_RNA.52-201ENST00000362760 96 ntBASIC0.57□□□□□ -2.32
RPA1P27694 RNU6-682P-201ENST00000363843 106 ntBASIC0.57□□□□□ -2.32
RPA1P27694 Y_RNA.188-201ENST00000363952 111 ntBASIC0.57□□□□□ -2.32
RPA1P27694 Y_RNA.233-201ENST00000364407 101 ntBASIC0.57□□□□□ -2.32
RPA1P27694 Y_RNA.297-201ENST00000364950 91 ntBASIC0.57□□□□□ -2.32
RPA1P27694 RNU6-342P-201ENST00000384521 104 ntBASIC0.57□□□□□ -2.32
RPA1P27694 Y_RNA.542-201ENST00000384641 111 ntBASIC0.57□□□□□ -2.32
RPA1P27694 SNORD38B-201ENST00000384690 67 ntBASIC0.57□□□□□ -2.32
RPA1P27694 RNU1-119P-201ENST00000391122 165 ntBASIC0.57□□□□□ -2.32
RPA1P27694 RNU6-1165P-201ENST00000410119 107 ntBASIC0.57□□□□□ -2.32
RPA1P27694 RNA5SP236-201ENST00000516169 116 ntBASIC0.57□□□□□ -2.32
RPA1P27694 RNU6-861P-201ENST00000516745 106 ntBASIC0.57□□□□□ -2.32
RPA1P27694 AC011195.1-201ENST00000578177 177 ntBASIC0.57□□□□□ -2.32
RPA1P27694 MIR4804-201ENST00000581683 73 ntBASIC0.57□□□□□ -2.32
RPA1P27694 SNORD38B-202ENST00000625943 69 ntBASIC0.57□□□□□ -2.32
RPA1P27694 MIR6841-201ENST00000637129 72 ntBASIC0.57□□□□□ -2.32
RPA1P27694 MIR1-1-201ENST00000362147 71 ntBASIC0.56□□□□□ -2.32
RPA1P27694 Y_RNA.171-201ENST00000363760 102 ntBASIC0.56□□□□□ -2.32
RPA1P27694 MIR624-201ENST00000385217 97 ntBASIC0.56□□□□□ -2.32
RPA1P27694 RNU7-56P-201ENST00000458744 62 ntBASIC0.56□□□□□ -2.32
RPA1P27694 Y_RNA.644-201ENST00000459006 113 ntBASIC0.56□□□□□ -2.32
RPA1P27694 Y_RNA.674-201ENST00000516362 113 ntBASIC0.56□□□□□ -2.32
RPA1P27694 RNU7-53P-201ENST00000516705 60 ntBASIC0.56□□□□□ -2.32
RPA1P27694 MIR4431-201ENST00000579990 94 ntBASIC0.56□□□□□ -2.32
RPA1P27694 AP000753.3-201ENST00000604083 169 ntBASIC0.56□□□□□ -2.32
RPA1P27694 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
RPA1P27694 RNU6-42P-201ENST00000384165 107 ntBASIC0.55□□□□□ -2.32
RPA1P27694 MIR520F-201ENST00000384824 87 ntBASIC0.55□□□□□ -2.32
RPA1P27694 SNORD105-201ENST00000386910 85 ntBASIC0.55□□□□□ -2.32
RPA1P27694 RNU6-1319P-201ENST00000390855 104 ntBASIC0.55□□□□□ -2.32
RPA1P27694 RNU6-747P-201ENST00000390928 104 ntBASIC0.55□□□□□ -2.32
RPA1P27694 RNU6-241P-201ENST00000391148 104 ntBASIC0.55□□□□□ -2.32
RPA1P27694 SNORA79-201ENST00000408376 140 ntBASIC0.55□□□□□ -2.32
RPA1P27694 RNU6-588P-201ENST00000410281 105 ntBASIC0.55□□□□□ -2.32
RPA1P27694 RNA5SP127-201ENST00000411051 133 ntBASIC0.55□□□□□ -2.32
RPA1P27694 RNU6-177P-201ENST00000411257 104 ntBASIC0.55□□□□□ -2.32
RPA1P27694 RNU6-126P-201ENST00000516685 103 ntBASIC0.55□□□□□ -2.32
RPA1P27694 MIR6513-201ENST00000621188 64 ntBASIC0.55□□□□□ -2.32
RPA1P27694 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
RPA1P27694 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
RPA1P27694 RNU6-349P-201ENST00000362402 107 ntBASIC0.54□□□□□ -2.32
RPA1P27694 RNU6-1020P-201ENST00000363684 107 ntBASIC0.54□□□□□ -2.32
RPA1P27694 Y_RNA.435-201ENST00000384095 112 ntBASIC0.54□□□□□ -2.32
RPA1P27694 Y_RNA.470-201ENST00000384307 117 ntBASIC0.54□□□□□ -2.32
RPA1P27694 MIR520H-201ENST00000385126 88 ntBASIC0.54□□□□□ -2.32
RPA1P27694 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.54□□□□□ -2.32
RPA1P27694 Y_RNA.617-201ENST00000410920 90 ntBASIC0.54□□□□□ -2.32
RPA1P27694 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
RPA1P27694 RNU7-185P-201ENST00000459215 60 ntBASIC0.54□□□□□ -2.32
RPA1P27694 MIR1270-201ENST00000459320 83 ntBASIC0.54□□□□□ -2.32
RPA1P27694 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
RPA1P27694 AC021613.1-201ENST00000623880 111 ntBASIC0.54□□□□□ -2.32
RPA1P27694 MIR302B-201ENST00000362188 73 ntBASIC0.53□□□□□ -2.32
RPA1P27694 Y_RNA.497-201ENST00000384447 98 ntBASIC0.53□□□□□ -2.32
RPA1P27694 U8.15-201ENST00000390947 134 ntBASIC0.53□□□□□ -2.32
RPA1P27694 Y_RNA.793-201ENST00000411222 111 ntBASIC0.53□□□□□ -2.32
RPA1P27694 AC098934.3-201ENST00000430450 190 ntBASIC0.53□□□□□ -2.32
RPA1P27694 RNU6-977P-201ENST00000516411 103 ntBASIC0.53□□□□□ -2.32
RPA1P27694 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.53□□□□□ -2.32
RPA1P27694 Y_RNA.757-201ENST00000578934 114 ntBASIC0.53□□□□□ -2.32
RPA1P27694 RNU6-945P-201ENST00000383947 107 ntBASIC0.52□□□□□ -2.33
RPA1P27694 Y_RNA.489-201ENST00000384410 101 ntBASIC0.52□□□□□ -2.33
RPA1P27694 Y_RNA.521-201ENST00000384560 114 ntBASIC0.52□□□□□ -2.33
RPA1P27694 RNA5SP222-201ENST00000411039 105 ntBASIC0.52□□□□□ -2.33
RPA1P27694 RNU7-102P-201ENST00000458948 62 ntBASIC0.52□□□□□ -2.33
RPA1P27694 RN7SKP12-201ENST00000516275 143 ntBASIC0.52□□□□□ -2.33
RPA1P27694 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
RPA1P27694 SNORA22.1-201ENST00000362701 134 ntBASIC0.51□□□□□ -2.33
RPA1P27694 RNU6-200P-201ENST00000364743 107 ntBASIC0.51□□□□□ -2.33
RPA1P27694 RNU6-1130P-201ENST00000365434 107 ntBASIC0.51□□□□□ -2.33
RPA1P27694 RNU4-45P-201ENST00000365469 141 ntBASIC0.51□□□□□ -2.33
RPA1P27694 Y_RNA.393-201ENST00000383936 102 ntBASIC0.51□□□□□ -2.33
RPA1P27694 MIR573-201ENST00000384964 99 ntBASIC0.51□□□□□ -2.33
RPA1P27694 RNU6-1135P-201ENST00000411083 103 ntBASIC0.51□□□□□ -2.33
RPA1P27694 AL512326.2-201ENST00000426359 151 ntBASIC0.51□□□□□ -2.33
RPA1P27694 Y_RNA.651-201ENST00000459380 103 ntBASIC0.51□□□□□ -2.33
RPA1P27694 RNA5SP436-201ENST00000516020 115 ntBASIC0.51□□□□□ -2.33
RPA1P27694 RNU2-35P-201ENST00000516446 142 ntBASIC0.51□□□□□ -2.33
RPA1P27694 Y_RNA.686-201ENST00000516548 134 ntBASIC0.51□□□□□ -2.33
RPA1P27694 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.51□□□□□ -2.33
RPA1P27694 AP002392.1-201ENST00000537692 208 ntBASIC0.51□□□□□ -2.33
RPA1P27694 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms