Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SNORA2B-201ENST00000384583 137 ntBASIC1.23□□□□□ -2.21
MMP8P22894 RNU6-1237P-201ENST00000384777 107 ntBASIC1.23□□□□□ -2.21
MMP8P22894 RNA5SP144-201ENST00000410846 116 ntBASIC1.23□□□□□ -2.21
MMP8P22894 MIR4305-201ENST00000583252 102 ntBASIC1.23□□□□□ -2.21
MMP8P22894 AP000753.3-201ENST00000604083 169 ntBASIC1.23□□□□□ -2.21
MMP8P22894 TUG1_4.1-201ENST00000619464 181 ntBASIC1.23□□□□□ -2.21
MMP8P22894 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
MMP8P22894 Y_RNA.327-201ENST00000365201 102 ntBASIC1.22□□□□□ -2.21
MMP8P22894 RNU6-613P-201ENST00000410412 108 ntBASIC1.22□□□□□ -2.21
MMP8P22894 AL512326.2-201ENST00000426359 151 ntBASIC1.22□□□□□ -2.21
MMP8P22894 AC002429.1-201ENST00000437672 148 ntBASIC1.22□□□□□ -2.21
MMP8P22894 RNU7-164P-201ENST00000459221 62 ntBASIC1.22□□□□□ -2.21
MMP8P22894 RN7SKP179-201ENST00000516126 217 ntBASIC1.22□□□□□ -2.21
MMP8P22894 RNU2-35P-201ENST00000516446 142 ntBASIC1.22□□□□□ -2.21
MMP8P22894 RNU6-113P-201ENST00000516653 101 ntBASIC1.22□□□□□ -2.21
MMP8P22894 IGKV1-22-201ENST00000524313 326 ntBASIC1.22□□□□□ -2.21
MMP8P22894 AL137067.1-201ENST00000615933 120 ntBASIC1.22□□□□□ -2.21
MMP8P22894 MIR6841-201ENST00000637129 72 ntBASIC1.22□□□□□ -2.21
MMP8P22894 SNORA25.8-201ENST00000364831 128 ntBASIC1.21□□□□□ -2.22
MMP8P22894 Y_RNA.430-201ENST00000384081 110 ntBASIC1.21□□□□□ -2.22
MMP8P22894 MRPL35P3-201ENST00000421557 364 ntBASIC1.21□□□□□ -2.22
MMP8P22894 RNU7-90P-201ENST00000459216 62 ntBASIC1.21□□□□□ -2.22
MMP8P22894 AC036111.3-201ENST00000526389 112 ntBASIC1.21□□□□□ -2.22
MMP8P22894 AL157834.3-201ENST00000615543 103 ntBASIC1.21□□□□□ -2.22
MMP8P22894 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
MMP8P22894 Y_RNA.354-201ENST00000365448 111 ntBASIC1.2□□□□□ -2.22
MMP8P22894 SNORD50.2-201ENST00000365465 70 ntBASIC1.2□□□□□ -2.22
MMP8P22894 MIR588-201ENST00000384900 83 ntBASIC1.2□□□□□ -2.22
MMP8P22894 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
MMP8P22894 AL022718.1-201ENST00000412004 84 ntBASIC1.2□□□□□ -2.22
MMP8P22894 AC063976.4-201ENST00000421971 163 ntBASIC1.2□□□□□ -2.22
MMP8P22894 AL158147.1-201ENST00000443970 75 ntBASIC1.2□□□□□ -2.22
MMP8P22894 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.2□□□□□ -2.22
MMP8P22894 RN7SKP19-201ENST00000516016 252 ntBASIC1.2□□□□□ -2.22
MMP8P22894 MIR4264-201ENST00000583520 66 ntBASIC1.2□□□□□ -2.22
MMP8P22894 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.2□□□□□ -2.22
MMP8P22894 MIR6740-201ENST00000618268 113 ntBASIC1.2□□□□□ -2.22
MMP8P22894 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
MMP8P22894 MIR518E-201ENST00000385252 88 ntBASIC1.19□□□□□ -2.22
MMP8P22894 MT-TN-201ENST00000387400 73 ntBASIC1.19□□□□□ -2.22
MMP8P22894 RNU7-113P-201ENST00000459273 62 ntBASIC1.19□□□□□ -2.22
MMP8P22894 snoU13.21-201ENST00000459368 105 ntBASIC1.19□□□□□ -2.22
MMP8P22894 RNU7-123P-201ENST00000515911 60 ntBASIC1.19□□□□□ -2.22
MMP8P22894 RNU6-1234P-201ENST00000516877 103 ntBASIC1.19□□□□□ -2.22
MMP8P22894 RNU6-94P-201ENST00000607728 107 ntBASIC1.19□□□□□ -2.22
MMP8P22894 uc_338.6-201ENST00000613544 171 ntBASIC1.19□□□□□ -2.22
MMP8P22894 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.19□□□□□ -2.22
MMP8P22894 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
MMP8P22894 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
MMP8P22894 RNU6-647P-201ENST00000364243 107 ntBASIC1.18□□□□□ -2.22
MMP8P22894 SNORD113.3-201ENST00000364630 78 ntBASIC1.18□□□□□ -2.22
MMP8P22894 RNU6-392P-201ENST00000364926 101 ntBASIC1.18□□□□□ -2.22
MMP8P22894 Y_RNA.470-201ENST00000384307 117 ntBASIC1.18□□□□□ -2.22
MMP8P22894 RNU7-62P-201ENST00000458856 62 ntBASIC1.18□□□□□ -2.22
MMP8P22894 RNU7-40P-201ENST00000516397 64 ntBASIC1.18□□□□□ -2.22
MMP8P22894 RNY4P20-201ENST00000516678 93 ntBASIC1.18□□□□□ -2.22
MMP8P22894 AC004812.1-201ENST00000540773 146 ntBASIC1.18□□□□□ -2.22
MMP8P22894 Y_RNA.280-201ENST00000364765 112 ntBASIC1.17□□□□□ -2.22
MMP8P22894 Y_RNA.298-201ENST00000364960 107 ntBASIC1.17□□□□□ -2.22
MMP8P22894 RNU6-53P-201ENST00000365367 106 ntBASIC1.17□□□□□ -2.22
MMP8P22894 Y_RNA.508-201ENST00000384502 114 ntBASIC1.17□□□□□ -2.22
MMP8P22894 RNU6-342P-201ENST00000384521 104 ntBASIC1.17□□□□□ -2.22
MMP8P22894 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
MMP8P22894 SNORD12-201ENST00000391002 90 ntBASIC1.17□□□□□ -2.22
MMP8P22894 MIR1263-201ENST00000408324 86 ntBASIC1.17□□□□□ -2.22
MMP8P22894 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.17□□□□□ -2.22
MMP8P22894 RNU6-893P-201ENST00000458841 100 ntBASIC1.17□□□□□ -2.22
MMP8P22894 snoU13.2-201ENST00000459201 104 ntBASIC1.17□□□□□ -2.22
MMP8P22894 AC113410.1-201ENST00000505029 247 ntBASIC1.17□□□□□ -2.22
MMP8P22894 RNU6-781P-201ENST00000516377 101 ntBASIC1.17□□□□□ -2.22
MMP8P22894 RNU6-1061P-201ENST00000516530 99 ntBASIC1.17□□□□□ -2.22
MMP8P22894 AC022523.2-201ENST00000561045 150 ntBASIC1.17□□□□□ -2.22
MMP8P22894 SNORA18-201ENST00000384416 132 ntBASIC1.16□□□□□ -2.22
MMP8P22894 Y_RNA.525-201ENST00000384570 113 ntBASIC1.16□□□□□ -2.22
MMP8P22894 Y_RNA.531-201ENST00000384589 121 ntBASIC1.16□□□□□ -2.22
MMP8P22894 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
MMP8P22894 RNA5SP33-201ENST00000516687 98 ntBASIC1.16□□□□□ -2.22
MMP8P22894 RNA5SP404-201ENST00000517118 132 ntBASIC1.16□□□□□ -2.22
MMP8P22894 AC106800.4-201ENST00000614905 153 ntBASIC1.16□□□□□ -2.22
MMP8P22894 Y_RNA.168-201ENST00000363740 102 ntBASIC1.15□□□□□ -2.23
MMP8P22894 RNU6-580P-201ENST00000365159 107 ntBASIC1.15□□□□□ -2.23
MMP8P22894 MIR539-201ENST00000365690 78 ntBASIC1.15□□□□□ -2.23
MMP8P22894 SNORA32-201ENST00000384072 121 ntBASIC1.15□□□□□ -2.23
MMP8P22894 RNU6-1104P-201ENST00000384723 104 ntBASIC1.15□□□□□ -2.23
MMP8P22894 SNORD111-201ENST00000408139 94 ntBASIC1.15□□□□□ -2.23
MMP8P22894 RNA5SP237-201ENST00000410414 113 ntBASIC1.15□□□□□ -2.23
MMP8P22894 SNORD83.1-201ENST00000411362 77 ntBASIC1.15□□□□□ -2.23
MMP8P22894 AC015818.7-201ENST00000428754 109 ntBASIC1.15□□□□□ -2.23
MMP8P22894 AC087499.7-201ENST00000441958 109 ntBASIC1.15□□□□□ -2.23
MMP8P22894 TMSB4XP3-201ENST00000445144 114 ntBASIC1.15□□□□□ -2.23
MMP8P22894 RNU7-107P-201ENST00000459121 61 ntBASIC1.15□□□□□ -2.23
MMP8P22894 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.15□□□□□ -2.23
MMP8P22894 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.15□□□□□ -2.23
MMP8P22894 MIR377-201ENST00000362145 69 ntBASIC1.14□□□□□ -2.23
MMP8P22894 Y_RNA.116-201ENST00000363292 103 ntBASIC1.14□□□□□ -2.23
MMP8P22894 Y_RNA.118-201ENST00000363300 101 ntBASIC1.14□□□□□ -2.23
MMP8P22894 Y_RNA.218-201ENST00000364218 104 ntBASIC1.14□□□□□ -2.23
MMP8P22894 RNU6-939P-201ENST00000384634 107 ntBASIC1.14□□□□□ -2.23
MMP8P22894 RNU6-1165P-201ENST00000410119 107 ntBASIC1.14□□□□□ -2.23
MMP8P22894 Y_RNA.617-201ENST00000410920 90 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms