Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 SNORA20-201ENST00000384662 132 ntBASIC-0.26□□□□□ -2.45
USF1P22415 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.26□□□□□ -2.45
USF1P22415 RBMX2P4-201ENST00000441256 376 ntBASIC-0.26□□□□□ -2.45
USF1P22415 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.26□□□□□ -2.45
USF1P22415 MTND5P34-201ENST00000568888 325 ntBASIC-0.26□□□□□ -2.45
USF1P22415 AP001180.6-201ENST00000584918 159 ntBASIC-0.26□□□□□ -2.45
USF1P22415 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.26□□□□□ -2.45
USF1P22415 AC091932.4-201ENST00000623386 200 ntBASIC-0.26□□□□□ -2.45
USF1P22415 MIR626-201ENST00000385032 94 ntBASIC-0.27□□□□□ -2.45
USF1P22415 RNU7-165P-201ENST00000458864 60 ntBASIC-0.27□□□□□ -2.45
USF1P22415 AC104692.1-201ENST00000472406 90 ntBASIC-0.27□□□□□ -2.45
USF1P22415 AP003072.1-201ENST00000531740 145 ntBASIC-0.27□□□□□ -2.45
USF1P22415 MIR5197-201ENST00000583721 112 ntBASIC-0.27□□□□□ -2.45
USF1P22415 AL133255.1-201ENST00000606374 441 ntBASIC-0.27□□□□□ -2.45
USF1P22415 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.28□□□□□ -2.45
USF1P22415 RNU6-652P-201ENST00000365488 107 ntBASIC-0.28□□□□□ -2.45
USF1P22415 SNORA1-201ENST00000384107 130 ntBASIC-0.28□□□□□ -2.45
USF1P22415 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.28□□□□□ -2.45
USF1P22415 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.28□□□□□ -2.45
USF1P22415 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.28□□□□□ -2.45
USF1P22415 RNU6-269P-201ENST00000391077 97 ntBASIC-0.28□□□□□ -2.45
USF1P22415 Z95118.1-201ENST00000421372 247 ntBASIC-0.28□□□□□ -2.45
USF1P22415 MIR4645-201ENST00000583158 77 ntBASIC-0.28□□□□□ -2.45
USF1P22415 MIR4493-201ENST00000584016 73 ntBASIC-0.28□□□□□ -2.45
USF1P22415 AL596211.1-201ENST00000569873 2277 ntBASIC-0.28□□□□□ -2.45
USF1P22415 RNU4-73P-201ENST00000363164 141 ntBASIC-0.29□□□□□ -2.46
USF1P22415 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.29□□□□□ -2.46
USF1P22415 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.29□□□□□ -2.46
USF1P22415 MIR501-201ENST00000390204 84 ntBASIC-0.29□□□□□ -2.46
USF1P22415 MIR1252-201ENST00000408861 65 ntBASIC-0.29□□□□□ -2.46
USF1P22415 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.29□□□□□ -2.46
USF1P22415 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.29□□□□□ -2.46
USF1P22415 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.29□□□□□ -2.46
USF1P22415 SNRPGP8-201ENST00000454064 226 ntBASIC-0.29□□□□□ -2.46
USF1P22415 RNU7-159P-201ENST00000459284 62 ntBASIC-0.29□□□□□ -2.46
USF1P22415 SNORA25.16-201ENST00000516741 121 ntBASIC-0.29□□□□□ -2.46
USF1P22415 AC138869.1-201ENST00000568623 124 ntBASIC-0.29□□□□□ -2.46
USF1P22415 MIR376A2-201ENST00000636782 80 ntBASIC-0.29□□□□□ -2.46
USF1P22415 MIR6841-201ENST00000637129 72 ntBASIC-0.29□□□□□ -2.46
USF1P22415 UBE2WP1-201ENST00000362030 340 ntBASIC-0.3□□□□□ -2.46
USF1P22415 SNORA22.1-201ENST00000362701 134 ntBASIC-0.3□□□□□ -2.46
USF1P22415 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.3□□□□□ -2.46
USF1P22415 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.3□□□□□ -2.46
USF1P22415 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.3□□□□□ -2.46
USF1P22415 RNU6-823P-201ENST00000391042 103 ntBASIC-0.3□□□□□ -2.46
USF1P22415 RNU6-121P-201ENST00000410525 99 ntBASIC-0.3□□□□□ -2.46
USF1P22415 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.3□□□□□ -2.46
USF1P22415 MTND4P19-201ENST00000446659 478 ntBASIC-0.3□□□□□ -2.46
USF1P22415 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.3□□□□□ -2.46
USF1P22415 AC090971.5-201ENST00000621102 293 ntBASIC-0.3□□□□□ -2.46
USF1P22415 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.31□□□□□ -2.46
USF1P22415 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.31□□□□□ -2.46
USF1P22415 RNY3P1-201ENST00000365085 102 ntBASIC-0.31□□□□□ -2.46
USF1P22415 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.31□□□□□ -2.46
USF1P22415 RNU6-211P-201ENST00000384047 107 ntBASIC-0.31□□□□□ -2.46
USF1P22415 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.31□□□□□ -2.46
USF1P22415 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.31□□□□□ -2.46
USF1P22415 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.31□□□□□ -2.46
USF1P22415 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.31□□□□□ -2.46
USF1P22415 RNU6-758P-201ENST00000516292 89 ntBASIC-0.31□□□□□ -2.46
USF1P22415 RNU6-875P-201ENST00000516488 106 ntBASIC-0.31□□□□□ -2.46
USF1P22415 AC021613.1-201ENST00000623880 111 ntBASIC-0.31□□□□□ -2.46
USF1P22415 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.32□□□□□ -2.46
USF1P22415 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.32□□□□□ -2.46
USF1P22415 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.32□□□□□ -2.46
USF1P22415 RNY1P13-201ENST00000365030 105 ntBASIC-0.32□□□□□ -2.46
USF1P22415 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.32□□□□□ -2.46
USF1P22415 RNU6-46P-201ENST00000383860 107 ntBASIC-0.32□□□□□ -2.46
USF1P22415 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.32□□□□□ -2.46
USF1P22415 SNORA18-201ENST00000384416 132 ntBASIC-0.32□□□□□ -2.46
USF1P22415 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.32□□□□□ -2.46
USF1P22415 RNU6-101P-201ENST00000410323 104 ntBASIC-0.32□□□□□ -2.46
USF1P22415 AL022718.1-201ENST00000412004 84 ntBASIC-0.32□□□□□ -2.46
USF1P22415 RNU6-893P-201ENST00000458841 100 ntBASIC-0.32□□□□□ -2.46
USF1P22415 SNORA40.15-201ENST00000516884 107 ntBASIC-0.32□□□□□ -2.46
USF1P22415 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.32□□□□□ -2.46
USF1P22415 MIR3129-201ENST00000581095 76 ntBASIC-0.32□□□□□ -2.46
USF1P22415 MIR548AD-201ENST00000584780 82 ntBASIC-0.32□□□□□ -2.46
USF1P22415 MIR8064-201ENST00000612863 90 ntBASIC-0.32□□□□□ -2.46
USF1P22415 SNORD114-28-201ENST00000363610 72 ntBASIC-0.33□□□□□ -2.46
USF1P22415 RNA5SP245-201ENST00000364239 121 ntBASIC-0.33□□□□□ -2.46
USF1P22415 MT-TT-201ENST00000387460 66 ntBASIC-0.33□□□□□ -2.46
USF1P22415 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.33□□□□□ -2.46
USF1P22415 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.33□□□□□ -2.46
USF1P22415 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.33□□□□□ -2.46
USF1P22415 RNA5SP163-201ENST00000410304 99 ntBASIC-0.33□□□□□ -2.46
USF1P22415 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.33□□□□□ -2.46
USF1P22415 RNU6-180P-201ENST00000516697 61 ntBASIC-0.33□□□□□ -2.46
USF1P22415 RNU7-70P-201ENST00000516941 66 ntBASIC-0.33□□□□□ -2.46
USF1P22415 SNORA70.25-201ENST00000612741 95 ntBASIC-0.33□□□□□ -2.46
USF1P22415 RNU4-58P-201ENST00000363192 141 ntBASIC-0.34□□□□□ -2.46
USF1P22415 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.34□□□□□ -2.46
USF1P22415 RNU6-450P-201ENST00000364654 107 ntBASIC-0.34□□□□□ -2.46
USF1P22415 MIR604-201ENST00000384880 94 ntBASIC-0.34□□□□□ -2.46
USF1P22415 AL606845.1-201ENST00000404881 255 ntBASIC-0.34□□□□□ -2.46
USF1P22415 RNA5SP25-201ENST00000410815 110 ntBASIC-0.34□□□□□ -2.46
USF1P22415 HMGN2P22-201ENST00000427588 175 ntBASIC-0.34□□□□□ -2.46
USF1P22415 AC108059.2-201ENST00000434626 151 ntBASIC-0.34□□□□□ -2.46
USF1P22415 SNORD4A-201ENST00000459174 72 ntBASIC-0.34□□□□□ -2.46
USF1P22415 RNU6-320P-201ENST00000516511 106 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms