Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MT-TF-201ENST00000387314 71 ntBASIC0.52□□□□□ -2.33
ERCC2P18074 RNU6-1319P-201ENST00000390855 104 ntBASIC0.52□□□□□ -2.33
ERCC2P18074 RNU6-747P-201ENST00000390928 104 ntBASIC0.52□□□□□ -2.33
ERCC2P18074 RNU6-241P-201ENST00000391148 104 ntBASIC0.52□□□□□ -2.33
ERCC2P18074 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
ERCC2P18074 MIR3152-201ENST00000579801 74 ntBASIC0.52□□□□□ -2.33
ERCC2P18074 AC008608.1-201ENST00000603910 127 ntBASIC0.52□□□□□ -2.33
ERCC2P18074 AL162730.1-201ENST00000605734 292 ntBASIC0.52□□□□□ -2.33
ERCC2P18074 Y_RNA.60-201ENST00000362831 98 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
ERCC2P18074 RNU4-70P-201ENST00000384579 139 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNU6-447P-201ENST00000410293 104 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNU6-1118P-201ENST00000410382 104 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNU6-1076P-201ENST00000410397 104 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNU6-355P-201ENST00000410427 104 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNU6-791P-201ENST00000410467 104 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNU6-705P-201ENST00000410601 104 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNU6-1100P-201ENST00000410691 104 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNU6-860P-201ENST00000410860 104 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNA5SP127-201ENST00000411051 133 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNU6-1217P-201ENST00000411276 104 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNU6-785P-201ENST00000411324 104 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 AC092628.1-201ENST00000436250 252 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 MTND3P2-201ENST00000438452 342 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNU7-102P-201ENST00000458948 62 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNU4-71P-201ENST00000516258 113 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNU7-156P-201ENST00000517214 74 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 U6.90-201ENST00000614007 104 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 U6.70-201ENST00000620287 104 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 U4.1-201ENST00000620349 87 ntBASIC0.51□□□□□ -2.33
ERCC2P18074 RNU4-45P-201ENST00000365469 141 ntBASIC0.5□□□□□ -2.33
ERCC2P18074 Y_RNA.430-201ENST00000384081 110 ntBASIC0.5□□□□□ -2.33
ERCC2P18074 SNORA20-201ENST00000384662 132 ntBASIC0.5□□□□□ -2.33
ERCC2P18074 AC098934.3-201ENST00000430450 190 ntBASIC0.5□□□□□ -2.33
ERCC2P18074 RNU6-111P-201ENST00000517179 105 ntBASIC0.5□□□□□ -2.33
ERCC2P18074 RNU6-275P-201ENST00000364910 107 ntBASIC0.49□□□□□ -2.33
ERCC2P18074 RNA5SP237-201ENST00000410414 113 ntBASIC0.49□□□□□ -2.33
ERCC2P18074 RNA5SP436-201ENST00000516020 115 ntBASIC0.49□□□□□ -2.33
ERCC2P18074 RNU6-1023P-201ENST00000516137 106 ntBASIC0.49□□□□□ -2.33
ERCC2P18074 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
ERCC2P18074 RNU6-1149P-201ENST00000516810 97 ntBASIC0.49□□□□□ -2.33
ERCC2P18074 MIR4503-201ENST00000582187 83 ntBASIC0.49□□□□□ -2.33
ERCC2P18074 SNORD92-201ENST00000585078 85 ntBASIC0.49□□□□□ -2.33
ERCC2P18074 MIR4719-201ENST00000585233 84 ntBASIC0.49□□□□□ -2.33
ERCC2P18074 AL662814.1-201ENST00000617364 121 ntBASIC0.49□□□□□ -2.33
ERCC2P18074 AC021613.1-201ENST00000623880 111 ntBASIC0.49□□□□□ -2.33
ERCC2P18074 SNORA22.1-201ENST00000362701 134 ntBASIC0.48□□□□□ -2.33
ERCC2P18074 SNORA20.1-201ENST00000364790 130 ntBASIC0.48□□□□□ -2.33
ERCC2P18074 RNU6-702P-201ENST00000364982 107 ntBASIC0.48□□□□□ -2.33
ERCC2P18074 Y_RNA.447-201ENST00000384184 113 ntBASIC0.48□□□□□ -2.33
ERCC2P18074 RNU6-196P-201ENST00000384315 107 ntBASIC0.48□□□□□ -2.33
ERCC2P18074 MIR624-201ENST00000385217 97 ntBASIC0.48□□□□□ -2.33
ERCC2P18074 SNORD93-201ENST00000408813 74 ntBASIC0.48□□□□□ -2.33
ERCC2P18074 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.48□□□□□ -2.33
ERCC2P18074 RNU6-229P-201ENST00000516614 102 ntBASIC0.48□□□□□ -2.33
ERCC2P18074 SCARNA15-202ENST00000516881 127 ntBASIC0.48□□□□□ -2.33
ERCC2P18074 AC090897.1-201ENST00000580909 226 ntBASIC0.48□□□□□ -2.33
ERCC2P18074 MIR7111-201ENST00000619751 72 ntBASIC0.48□□□□□ -2.33
ERCC2P18074 SNORD18A-201ENST00000363753 72 ntBASIC0.47□□□□□ -2.33
ERCC2P18074 RNU4-16P-201ENST00000364737 141 ntBASIC0.47□□□□□ -2.33
ERCC2P18074 Y_RNA.307-201ENST00000365022 117 ntBASIC0.47□□□□□ -2.33
ERCC2P18074 Y_RNA.412-201ENST00000384001 104 ntBASIC0.47□□□□□ -2.33
ERCC2P18074 SNORD100-201ENST00000408573 76 ntBASIC0.47□□□□□ -2.33
ERCC2P18074 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.47□□□□□ -2.33
ERCC2P18074 RPL39P25-201ENST00000449384 154 ntBASIC0.47□□□□□ -2.33
ERCC2P18074 U6.106-201ENST00000636360 105 ntBASIC0.47□□□□□ -2.33
ERCC2P18074 MIR6841-201ENST00000637129 72 ntBASIC0.47□□□□□ -2.33
ERCC2P18074 SNORA25.7-201ENST00000364375 127 ntBASIC0.46□□□□□ -2.34
ERCC2P18074 RNU6-1336P-201ENST00000383886 109 ntBASIC0.46□□□□□ -2.34
ERCC2P18074 RNU6-574P-201ENST00000384265 107 ntBASIC0.46□□□□□ -2.34
ERCC2P18074 MIR936-201ENST00000401264 98 ntBASIC0.46□□□□□ -2.34
ERCC2P18074 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
ERCC2P18074 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.46□□□□□ -2.34
ERCC2P18074 SNORA68.3-201ENST00000515906 83 ntBASIC0.46□□□□□ -2.34
ERCC2P18074 MRPS18CP4-201ENST00000535821 231 ntBASIC0.46□□□□□ -2.34
ERCC2P18074 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.46□□□□□ -2.34
ERCC2P18074 MIR5087-201ENST00000635826 76 ntBASIC0.46□□□□□ -2.34
ERCC2P18074 AC099654.10-201ENST00000640395 161 ntBASIC0.46□□□□□ -2.34
ERCC2P18074 Y_RNA.75-201ENST00000362927 97 ntBASIC0.45□□□□□ -2.34
ERCC2P18074 Y_RNA.193-201ENST00000363979 102 ntBASIC0.45□□□□□ -2.34
ERCC2P18074 Y_RNA.521-201ENST00000384560 114 ntBASIC0.45□□□□□ -2.34
ERCC2P18074 RNU6-679P-201ENST00000391003 106 ntBASIC0.45□□□□□ -2.34
ERCC2P18074 RNU6-918P-201ENST00000391219 106 ntBASIC0.45□□□□□ -2.34
ERCC2P18074 RNU4-83P-201ENST00000410863 133 ntBASIC0.45□□□□□ -2.34
ERCC2P18074 AC002350.1-201ENST00000490759 375 ntBASIC0.45□□□□□ -2.34
ERCC2P18074 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.45□□□□□ -2.34
ERCC2P18074 AC243829.3-201ENST00000622177 108 ntBASIC0.45□□□□□ -2.34
ERCC2P18074 MTND5P32-201ENST00000560711 1802 ntBASIC0.45□□□□□ -2.34
ERCC2P18074 Y_RNA.452-201ENST00000384202 108 ntBASIC0.44□□□□□ -2.34
ERCC2P18074 MIR613-201ENST00000385248 95 ntBASIC0.44□□□□□ -2.34
ERCC2P18074 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.44□□□□□ -2.34
ERCC2P18074 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.44□□□□□ -2.34
ERCC2P18074 AC141846.1-201ENST00000568348 142 ntBASIC0.44□□□□□ -2.34
ERCC2P18074 MIR3149-201ENST00000584629 83 ntBASIC0.44□□□□□ -2.34
ERCC2P18074 PVT1_3.1-201ENST00000620853 95 ntBASIC0.44□□□□□ -2.34
ERCC2P18074 AC092634.7-201ENST00000621022 103 ntBASIC0.44□□□□□ -2.34
ERCC2P18074 Y_RNA.200-201ENST00000364018 102 ntBASIC0.43□□□□□ -2.34
ERCC2P18074 RNU6-342P-201ENST00000384521 104 ntBASIC0.43□□□□□ -2.34
ERCC2P18074 U8.15-201ENST00000390947 134 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 378.5 ms