Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CD44P16070 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CD44P16070 MT-TN-201ENST00000387400 73 ntBASIC3.55□□□□□ -1.84
CD44P16070 RNU11-3P-201ENST00000391111 133 ntBASIC3.55□□□□□ -1.84
CD44P16070 AL359511.1-201ENST00000402970 211 ntBASIC3.55□□□□□ -1.84
CD44P16070 RNU7-26P-201ENST00000458980 63 ntBASIC3.55□□□□□ -1.84
CD44P16070 SNORD111.1-201ENST00000516421 86 ntBASIC3.55□□□□□ -1.84
CD44P16070 SNORD59.2-201ENST00000516873 68 ntBASIC3.55□□□□□ -1.84
CD44P16070 NAMPTP3-201ENST00000569273 224 ntBASIC3.55□□□□□ -1.84
CD44P16070 MIR3657-201ENST00000584818 117 ntBASIC3.55□□□□□ -1.84
CD44P16070 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CD44P16070 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CD44P16070 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.55□□□□□ -1.84
CD44P16070 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CD44P16070 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CD44P16070 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CD44P16070 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.54□□□□□ -1.84
CD44P16070 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CD44P16070 RNU6-322P-201ENST00000516010 103 ntBASIC3.54□□□□□ -1.84
CD44P16070 RNU6-656P-201ENST00000516785 107 ntBASIC3.54□□□□□ -1.84
CD44P16070 AC022202.1-201ENST00000613515 211 ntBASIC3.54□□□□□ -1.84
CD44P16070 RNU6-112P-201ENST00000363599 104 ntBASIC3.53□□□□□ -1.84
CD44P16070 RNU4-33P-201ENST00000364316 85 ntBASIC3.53□□□□□ -1.84
CD44P16070 MIR653-201ENST00000385279 96 ntBASIC3.53□□□□□ -1.84
CD44P16070 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC3.53□□□□□ -1.84
CD44P16070 RNU6-287P-201ENST00000516230 98 ntBASIC3.53□□□□□ -1.84
CD44P16070 RNA5SP147-201ENST00000516493 109 ntBASIC3.53□□□□□ -1.84
CD44P16070 MIR3186-201ENST00000577404 85 ntBASIC3.53□□□□□ -1.84
CD44P16070 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CD44P16070 AC131280.1-202ENST00000624067 4211 ntBASIC3.52□□□□□ -1.85
CD44P16070 RNU7-170P-201ENST00000459303 61 ntBASIC3.52□□□□□ -1.85
CD44P16070 RN7SL293P-201ENST00000481765 281 ntBASIC3.52□□□□□ -1.85
CD44P16070 SNORA31.15-201ENST00000516771 132 ntBASIC3.52□□□□□ -1.85
CD44P16070 AC245166.1-201ENST00000521012 253 ntBASIC3.52□□□□□ -1.85
CD44P16070 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CD44P16070 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CD44P16070 RNA5SP50-201ENST00000363731 107 ntBASIC3.51□□□□□ -1.85
CD44P16070 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CD44P16070 RN7SL75P-201ENST00000461926 281 ntBASIC3.51□□□□□ -1.85
CD44P16070 SNORA70.14-201ENST00000516205 110 ntBASIC3.51□□□□□ -1.85
CD44P16070 SNORA51-201ENST00000606420 132 ntBASIC3.51□□□□□ -1.85
CD44P16070 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CD44P16070 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CD44P16070 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CD44P16070 RNU1-91P-201ENST00000364746 163 ntBASIC3.5□□□□□ -1.85
CD44P16070 MIR7-2-201ENST00000384970 110 ntBASIC3.5□□□□□ -1.85
CD44P16070 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC3.5□□□□□ -1.85
CD44P16070 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.5□□□□□ -1.85
CD44P16070 MIR2115-201ENST00000516657 100 ntBASIC3.5□□□□□ -1.85
CD44P16070 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.5□□□□□ -1.85
CD44P16070 MIR3192-201ENST00000584920 77 ntBASIC3.5□□□□□ -1.85
CD44P16070 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.5□□□□□ -1.85
CD44P16070 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CD44P16070 RNU1-138P-201ENST00000384093 164 ntBASIC3.49□□□□□ -1.85
CD44P16070 SNORA46-201ENST00000384762 135 ntBASIC3.49□□□□□ -1.85
CD44P16070 MIR630-201ENST00000384957 97 ntBASIC3.49□□□□□ -1.85
CD44P16070 MIR545-201ENST00000385085 106 ntBASIC3.49□□□□□ -1.85
CD44P16070 AC138907.6-201ENST00000568401 126 ntBASIC3.49□□□□□ -1.85
CD44P16070 AC138869.1-201ENST00000568623 124 ntBASIC3.49□□□□□ -1.85
CD44P16070 MIR3616-201ENST00000584070 92 ntBASIC3.49□□□□□ -1.85
CD44P16070 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CD44P16070 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CD44P16070 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CD44P16070 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CD44P16070 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CD44P16070 SNORA48.1-201ENST00000390879 135 ntBASIC3.48□□□□□ -1.85
CD44P16070 AC019176.1-201ENST00000518519 225 ntBASIC3.48□□□□□ -1.85
CD44P16070 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.48□□□□□ -1.85
CD44P16070 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CD44P16070 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CD44P16070 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CD44P16070 RNU6-1123P-201ENST00000362347 106 ntBASIC3.47□□□□□ -1.85
CD44P16070 MIR1283-2-201ENST00000408621 87 ntBASIC3.47□□□□□ -1.85
CD44P16070 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.47□□□□□ -1.85
CD44P16070 MIR18B-201ENST00000454574 71 ntBASIC3.47□□□□□ -1.85
CD44P16070 MIR6082-201ENST00000613604 109 ntBASIC3.47□□□□□ -1.85
CD44P16070 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CD44P16070 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.47□□□□□ -1.85
CD44P16070 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.46□□□□□ -1.86
CD44P16070 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.46□□□□□ -1.86
CD44P16070 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.46□□□□□ -1.86
CD44P16070 Y_RNA.13-201ENST00000362403 112 ntBASIC3.46□□□□□ -1.86
CD44P16070 AC091153.1-201ENST00000466297 402 ntBASIC3.46□□□□□ -1.86
CD44P16070 RN7SL20P-201ENST00000488827 297 ntBASIC3.46□□□□□ -1.86
CD44P16070 RNU6ATAC14P-201ENST00000516218 91 ntBASIC3.46□□□□□ -1.86
CD44P16070 SNORA67.7-201ENST00000516664 135 ntBASIC3.46□□□□□ -1.86
CD44P16070 MIR3158-1-201ENST00000583596 81 ntBASIC3.46□□□□□ -1.86
CD44P16070 U6.105-201ENST00000637379 88 ntBASIC3.46□□□□□ -1.86
CD44P16070 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CD44P16070 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CD44P16070 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CD44P16070 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CD44P16070 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CD44P16070 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CD44P16070 MIR377-201ENST00000362145 69 ntBASIC3.45□□□□□ -1.86
CD44P16070 RNU6-260P-201ENST00000384092 107 ntBASIC3.45□□□□□ -1.86
CD44P16070 MIR183-201ENST00000384958 110 ntBASIC3.45□□□□□ -1.86
CD44P16070 RNU7-119P-201ENST00000459279 63 ntBASIC3.45□□□□□ -1.86
CD44P16070 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CD44P16070 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms