Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNU7-195P-201ENST00000458793 62 ntBASIC-3.29□□□□□ -2.94
VCANP13611 AC141846.1-201ENST00000568348 142 ntBASIC-3.29□□□□□ -2.94
VCANP13611 U6.107-201ENST00000637108 79 ntBASIC-3.29□□□□□ -2.94
VCANP13611 RNU6-527P-201ENST00000363425 104 ntBASIC-3.3□□□□□ -2.94
VCANP13611 SNORD115-5-201ENST00000363633 82 ntBASIC-3.3□□□□□ -2.94
VCANP13611 SNORD115-1-201ENST00000364961 82 ntBASIC-3.3□□□□□ -2.94
VCANP13611 RNU6-1254P-201ENST00000391266 104 ntBASIC-3.3□□□□□ -2.94
VCANP13611 MTATP6P2-201ENST00000603319 678 ntBASIC-3.3□□□□□ -2.94
VCANP13611 AC124303.1-201ENST00000605703 360 ntBASIC-3.3□□□□□ -2.94
VCANP13611 AC109347.2-201ENST00000610220 349 ntBASIC-3.3□□□□□ -2.94
VCANP13611 RNU6-1093P-201ENST00000391194 107 ntBASIC-3.3□□□□□ -2.94
VCANP13611 AC091133.4-201ENST00000511142 308 ntBASIC-3.3□□□□□ -2.94
VCANP13611 FRG2DP-202ENST00000566967 323 ntBASIC-3.3□□□□□ -2.94
VCANP13611 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-3.3□□□□□ -2.94
VCANP13611 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-3.3□□□□□ -2.94
VCANP13611 Y_RNA.689-201ENST00000516589 107 ntBASIC-3.31□□□□□ -2.94
VCANP13611 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.31□□□□□ -2.94
VCANP13611 MIR124-1-201ENST00000385275 85 ntBASIC-3.31□□□□□ -2.94
VCANP13611 RNY1P13-201ENST00000365030 105 ntBASIC-3.31□□□□□ -2.94
VCANP13611 MTATP6P15-201ENST00000527233 835 ntBASIC-3.31□□□□□ -2.94
VCANP13611 RNU6-1169P-201ENST00000363537 103 ntBASIC-3.32□□□□□ -2.94
VCANP13611 Y_RNA.366-201ENST00000365540 102 ntBASIC-3.32□□□□□ -2.94
VCANP13611 Y_RNA.565-201ENST00000384719 101 ntBASIC-3.32□□□□□ -2.94
VCANP13611 LARP7P2-201ENST00000575306 125 ntBASIC-3.32□□□□□ -2.94
VCANP13611 NDUFB1P2-201ENST00000449477 176 ntBASIC-3.32□□□□□ -2.94
VCANP13611 UBE2V1P7-201ENST00000446395 340 ntBASIC-3.32□□□□□ -2.94
VCANP13611 AL117187.1-201ENST00000555482 181 ntBASIC-3.32□□□□□ -2.94
VCANP13611 AC098479.1-201ENST00000609225 154 ntBASIC-3.32□□□□□ -2.94
VCANP13611 RNU6-524P-201ENST00000384270 107 ntBASIC-3.33□□□□□ -2.94
VCANP13611 MIR203A-201ENST00000384836 110 ntBASIC-3.33□□□□□ -2.94
VCANP13611 AC090502.2-201ENST00000549267 280 ntBASIC-3.33□□□□□ -2.94
VCANP13611 MIR548AG1-201ENST00000579932 66 ntBASIC-3.33□□□□□ -2.94
VCANP13611 RNU6-247P-201ENST00000362636 107 ntBASIC-3.33□□□□□ -2.94
VCANP13611 MIR122-201ENST00000385044 85 ntBASIC-3.33□□□□□ -2.94
VCANP13611 Y_RNA.307-201ENST00000365022 117 ntBASIC-3.34□□□□□ -2.94
VCANP13611 RNU6-597P-201ENST00000365620 102 ntBASIC-3.34□□□□□ -2.94
VCANP13611 RNU6-310P-201ENST00000384655 107 ntBASIC-3.34□□□□□ -2.94
VCANP13611 AC138393.2-201ENST00000414742 246 ntBASIC-3.34□□□□□ -2.94
VCANP13611 AC245297.2-201ENST00000610119 565 ntBASIC-3.34□□□□□ -2.94
VCANP13611 U4.7-201ENST00000638126 106 ntBASIC-3.34□□□□□ -2.94
VCANP13611 SNORD63B-201ENST00000411005 70 ntBASIC-3.34□□□□□ -2.94
VCANP13611 TPTE2P1-204ENST00000435256 593 ntBASIC-3.34□□□□□ -2.94
VCANP13611 AL049829.1-201ENST00000465411 156 ntBASIC-3.34□□□□□ -2.94
VCANP13611 AL607023.1-201ENST00000620045 248 ntBASIC-3.34□□□□□ -2.94
VCANP13611 MIR548AH-201ENST00000637109 76 ntBASIC-3.34□□□□□ -2.94
VCANP13611 MIR519A1-201ENST00000385257 85 ntBASIC-3.34□□□□□ -2.94
VCANP13611 DLGAP5P1-201ENST00000430307 464 ntBASIC-3.34□□□□□ -2.94
VCANP13611 AC008873.1-201ENST00000625051 138 ntBASIC-3.34□□□□□ -2.94
VCANP13611 RNU6-1163P-201ENST00000364516 107 ntBASIC-3.35□□□□□ -2.95
VCANP13611 Y_RNA.570-201ENST00000384750 101 ntBASIC-3.35□□□□□ -2.95
VCANP13611 AP000907.4-201ENST00000604143 237 ntBASIC-3.35□□□□□ -2.95
VCANP13611 AC007671.2-201ENST00000637344 619 ntBASIC-3.35□□□□□ -2.95
VCANP13611 RNU6-651P-201ENST00000411040 105 ntBASIC-3.35□□□□□ -2.95
VCANP13611 AL139421.1-201ENST00000423010 169 ntBASIC-3.35□□□□□ -2.95
VCANP13611 AC012306.1-201ENST00000423267 114 ntBASIC-3.35□□□□□ -2.95
VCANP13611 MTND4P18-201ENST00000447010 465 ntBASIC-3.35□□□□□ -2.95
VCANP13611 AC139792.3-201ENST00000623525 224 ntBASIC-3.35□□□□□ -2.95
VCANP13611 MIR202-201ENST00000362219 110 ntBASIC-3.36□□□□□ -2.95
VCANP13611 MIR579-201ENST00000385221 98 ntBASIC-3.36□□□□□ -2.95
VCANP13611 VN1R91P-201ENST00000594377 169 ntBASIC-3.36□□□□□ -2.95
VCANP13611 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-3.36□□□□□ -2.95
VCANP13611 RNU6-914P-201ENST00000516749 109 ntBASIC-3.36□□□□□ -2.95
VCANP13611 AL138825.1-201ENST00000618587 192 ntBASIC-3.36□□□□□ -2.95
VCANP13611 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.37□□□□□ -2.95
VCANP13611 RNU6-1340P-201ENST00000384438 107 ntBASIC-3.37□□□□□ -2.95
VCANP13611 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-3.37□□□□□ -2.95
VCANP13611 RNU6-518P-201ENST00000516056 96 ntBASIC-3.37□□□□□ -2.95
VCANP13611 Y_RNA.809-201ENST00000516058 95 ntBASIC-3.37□□□□□ -2.95
VCANP13611 RNU6-108P-201ENST00000365558 107 ntBASIC-3.37□□□□□ -2.95
VCANP13611 SNORD77.3-201ENST00000391113 65 ntBASIC-3.37□□□□□ -2.95
VCANP13611 RNU6-854P-201ENST00000364036 107 ntBASIC-3.38□□□□□ -2.95
VCANP13611 RNU6-1124P-201ENST00000384169 107 ntBASIC-3.38□□□□□ -2.95
VCANP13611 RNU6-757P-201ENST00000410334 100 ntBASIC-3.38□□□□□ -2.95
VCANP13611 RNU1-54P-201ENST00000517181 120 ntBASIC-3.38□□□□□ -2.95
VCANP13611 RNU6-643P-201ENST00000384018 107 ntBASIC-3.38□□□□□ -2.95
VCANP13611 AC005345.1-201ENST00000431868 217 ntBASIC-3.38□□□□□ -2.95
VCANP13611 AC107399.1-201ENST00000451226 265 ntBASIC-3.38□□□□□ -2.95
VCANP13611 Y_RNA.207-201ENST00000364142 106 ntBASIC-3.39□□□□□ -2.95
VCANP13611 RNU6-649P-201ENST00000384463 107 ntBASIC-3.39□□□□□ -2.95
VCANP13611 RNU6-1241P-201ENST00000384536 107 ntBASIC-3.39□□□□□ -2.95
VCANP13611 Y_RNA.541-201ENST00000384640 113 ntBASIC-3.39□□□□□ -2.95
VCANP13611 RNU2-38P-201ENST00000410856 79 ntBASIC-3.39□□□□□ -2.95
VCANP13611 Y_RNA.621-201ENST00000411065 96 ntBASIC-3.39□□□□□ -2.95
VCANP13611 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-3.39□□□□□ -2.95
VCANP13611 RNU6-885P-201ENST00000516607 104 ntBASIC-3.39□□□□□ -2.95
VCANP13611 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-3.39□□□□□ -2.95
VCANP13611 RNU6-481P-201ENST00000384194 107 ntBASIC-3.4□□□□□ -2.95
VCANP13611 SEPT14P8-201ENST00000508026 178 ntBASIC-3.4□□□□□ -2.95
VCANP13611 RNA5SP147-201ENST00000516493 109 ntBASIC-3.4□□□□□ -2.95
VCANP13611 MIR6717-201ENST00000622747 73 ntBASIC-3.4□□□□□ -2.95
VCANP13611 RNU4-70P-201ENST00000384579 139 ntBASIC-3.4□□□□□ -2.95
VCANP13611 RNU6-1203P-201ENST00000410703 110 ntBASIC-3.4□□□□□ -2.95
VCANP13611 AL033528.1-201ENST00000453780 140 ntBASIC-3.4□□□□□ -2.95
VCANP13611 UBE2V1P12-201ENST00000503954 474 ntBASIC-3.4□□□□□ -2.95
VCANP13611 AC090615.1-201ENST00000577519 154 ntBASIC-3.4□□□□□ -2.95
VCANP13611 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.4□□□□□ -2.95
VCANP13611 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-3.41□□□□□ -2.95
VCANP13611 RNU6-359P-201ENST00000365466 108 ntBASIC-3.41□□□□□ -2.95
VCANP13611 AL133153.1-201ENST00000557756 303 ntBASIC-3.41□□□□□ -2.95
VCANP13611 U6.42-201ENST00000618440 107 ntBASIC-3.41□□□□□ -2.96
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms