Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 MIR216A-201ENST00000385063 110 ntBASIC1.21□□□□□ -2.22
PEPDP12955 SNORA75.2-201ENST00000391138 150 ntBASIC1.21□□□□□ -2.22
PEPDP12955 SNORA75.3-201ENST00000391231 150 ntBASIC1.21□□□□□ -2.22
PEPDP12955 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.21□□□□□ -2.22
PEPDP12955 HAR1A.1-201ENST00000459583 118 ntBASIC1.21□□□□□ -2.22
PEPDP12955 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
PEPDP12955 SNORD38B-202ENST00000625943 69 ntBASIC1.21□□□□□ -2.22
PEPDP12955 Y_RNA.8-201ENST00000362353 102 ntBASIC1.2□□□□□ -2.22
PEPDP12955 Y_RNA.280-201ENST00000364765 112 ntBASIC1.2□□□□□ -2.22
PEPDP12955 SNORD111-201ENST00000408139 94 ntBASIC1.2□□□□□ -2.22
PEPDP12955 RNU6-602P-201ENST00000411155 105 ntBASIC1.2□□□□□ -2.22
PEPDP12955 Y_RNA.703-201ENST00000516846 111 ntBASIC1.2□□□□□ -2.22
PEPDP12955 AC019288.1-201ENST00000557918 224 ntBASIC1.2□□□□□ -2.22
PEPDP12955 MIR3121-201ENST00000579680 77 ntBASIC1.2□□□□□ -2.22
PEPDP12955 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.2□□□□□ -2.22
PEPDP12955 AL353770.2-201ENST00000620024 78 ntBASIC1.2□□□□□ -2.22
PEPDP12955 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
PEPDP12955 SNORD115-2-201ENST00000362842 82 ntBASIC1.19□□□□□ -2.22
PEPDP12955 SNORA25.3-201ENST00000363205 127 ntBASIC1.19□□□□□ -2.22
PEPDP12955 RNA5SP457-201ENST00000363657 124 ntBASIC1.19□□□□□ -2.22
PEPDP12955 RNY1P11-201ENST00000363759 113 ntBASIC1.19□□□□□ -2.22
PEPDP12955 SNORD115-20-201ENST00000365099 82 ntBASIC1.19□□□□□ -2.22
PEPDP12955 MIR200A-201ENST00000384875 90 ntBASIC1.19□□□□□ -2.22
PEPDP12955 AC244023.1-201ENST00000426884 112 ntBASIC1.19□□□□□ -2.22
PEPDP12955 AC004223.1-201ENST00000479840 271 ntBASIC1.19□□□□□ -2.22
PEPDP12955 AP000753.3-201ENST00000604083 169 ntBASIC1.19□□□□□ -2.22
PEPDP12955 AC242498.1-201ENST00000604134 111 ntBASIC1.19□□□□□ -2.22
PEPDP12955 AC106800.4-201ENST00000614905 153 ntBASIC1.19□□□□□ -2.22
PEPDP12955 MIR6788-201ENST00000618842 66 ntBASIC1.19□□□□□ -2.22
PEPDP12955 AL596211.1-201ENST00000569873 2277 ntBASIC1.18□□□□□ -2.22
PEPDP12955 SNORD113.3-201ENST00000364630 78 ntBASIC1.18□□□□□ -2.22
PEPDP12955 Y_RNA.343-201ENST00000365354 112 ntBASIC1.18□□□□□ -2.22
PEPDP12955 RNU6-125P-201ENST00000384505 107 ntBASIC1.18□□□□□ -2.22
PEPDP12955 SNORA20-201ENST00000384662 132 ntBASIC1.18□□□□□ -2.22
PEPDP12955 Y_RNA.568-201ENST00000384742 113 ntBASIC1.18□□□□□ -2.22
PEPDP12955 MIR563-201ENST00000385080 79 ntBASIC1.18□□□□□ -2.22
PEPDP12955 AC063976.4-201ENST00000421971 163 ntBASIC1.18□□□□□ -2.22
PEPDP12955 AC002429.1-201ENST00000437672 148 ntBASIC1.18□□□□□ -2.22
PEPDP12955 Y_RNA.651-201ENST00000459380 103 ntBASIC1.18□□□□□ -2.22
PEPDP12955 Y_RNA.692-201ENST00000516627 105 ntBASIC1.18□□□□□ -2.22
PEPDP12955 U7.2-201ENST00000607576 63 ntBASIC1.18□□□□□ -2.22
PEPDP12955 MRPL35P3-201ENST00000421557 364 ntBASIC1.17□□□□□ -2.22
PEPDP12955 RPS29P1-201ENST00000465274 159 ntBASIC1.17□□□□□ -2.22
PEPDP12955 Y_RNA.690-201ENST00000516603 95 ntBASIC1.17□□□□□ -2.22
PEPDP12955 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
PEPDP12955 AC036111.3-201ENST00000526389 112 ntBASIC1.17□□□□□ -2.22
PEPDP12955 AP001328.1-201ENST00000528550 176 ntBASIC1.17□□□□□ -2.22
PEPDP12955 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
PEPDP12955 AL391516.1-201ENST00000554380 2449 ntBASIC1.16□□□□□ -2.22
PEPDP12955 SNORA25.8-201ENST00000364831 128 ntBASIC1.16□□□□□ -2.22
PEPDP12955 SNORA40.6-201ENST00000391153 128 ntBASIC1.16□□□□□ -2.22
PEPDP12955 RNA5SP144-201ENST00000410846 116 ntBASIC1.16□□□□□ -2.22
PEPDP12955 AC090844.1-201ENST00000422019 156 ntBASIC1.16□□□□□ -2.22
PEPDP12955 snoU13.2-201ENST00000459201 104 ntBASIC1.16□□□□□ -2.22
PEPDP12955 MIR3660-201ENST00000584845 100 ntBASIC1.16□□□□□ -2.22
PEPDP12955 TUG1_4.1-201ENST00000619464 181 ntBASIC1.16□□□□□ -2.22
PEPDP12955 AC010332.2-201ENST00000613083 1904 ntBASIC1.15□□□□□ -2.22
PEPDP12955 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
PEPDP12955 Y_RNA.85-201ENST00000363014 111 ntBASIC1.15□□□□□ -2.23
PEPDP12955 RNA5SP62-201ENST00000363457 110 ntBASIC1.15□□□□□ -2.23
PEPDP12955 RNU6-915P-201ENST00000364943 103 ntBASIC1.15□□□□□ -2.23
PEPDP12955 Y_RNA.420-201ENST00000384043 110 ntBASIC1.15□□□□□ -2.23
PEPDP12955 MIR193B-201ENST00000384907 83 ntBASIC1.15□□□□□ -2.23
PEPDP12955 RNA5SP476-201ENST00000516613 103 ntBASIC1.15□□□□□ -2.23
PEPDP12955 Y_RNA.757-201ENST00000578934 114 ntBASIC1.15□□□□□ -2.23
PEPDP12955 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.15□□□□□ -2.23
PEPDP12955 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.15□□□□□ -2.23
PEPDP12955 SNORA22.1-201ENST00000362701 134 ntBASIC1.14□□□□□ -2.23
PEPDP12955 RNU6-309P-201ENST00000364573 106 ntBASIC1.14□□□□□ -2.23
PEPDP12955 RNU6-1190P-201ENST00000410811 104 ntBASIC1.14□□□□□ -2.23
PEPDP12955 MIR18B-201ENST00000454574 71 ntBASIC1.14□□□□□ -2.23
PEPDP12955 SNORA25.12-201ENST00000516202 82 ntBASIC1.14□□□□□ -2.23
PEPDP12955 Y_RNA.686-201ENST00000516548 134 ntBASIC1.14□□□□□ -2.23
PEPDP12955 MIR1273G-201ENST00000577677 100 ntBASIC1.14□□□□□ -2.23
PEPDP12955 AL589743.1-201ENST00000551932 2712 ntBASIC1.14□□□□□ -2.23
PEPDP12955 MIR342-201ENST00000362212 99 ntBASIC1.13□□□□□ -2.23
PEPDP12955 RNU6-647P-201ENST00000364243 107 ntBASIC1.13□□□□□ -2.23
PEPDP12955 MIR520E-201ENST00000384867 87 ntBASIC1.13□□□□□ -2.23
PEPDP12955 MIR548J-201ENST00000408833 112 ntBASIC1.13□□□□□ -2.23
PEPDP12955 AC012676.2-201ENST00000619258 186 ntBASIC1.13□□□□□ -2.23
PEPDP12955 SNORA40-201ENST00000388090 126 ntBASIC1.12□□□□□ -2.23
PEPDP12955 RNU6-460P-201ENST00000391158 108 ntBASIC1.12□□□□□ -2.23
PEPDP12955 AL022718.1-201ENST00000412004 84 ntBASIC1.12□□□□□ -2.23
PEPDP12955 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.12□□□□□ -2.23
PEPDP12955 AC133485.4-201ENST00000561835 220 ntBASIC1.12□□□□□ -2.23
PEPDP12955 AC138907.4-201ENST00000570107 226 ntBASIC1.12□□□□□ -2.23
PEPDP12955 MIR4305-201ENST00000583252 102 ntBASIC1.12□□□□□ -2.23
PEPDP12955 AC008163.1-202ENST00000636004 2889 ntBASIC1.12□□□□□ -2.23
PEPDP12955 Y_RNA.115-201ENST00000363272 98 ntBASIC1.11□□□□□ -2.23
PEPDP12955 RNU6-654P-201ENST00000364373 107 ntBASIC1.11□□□□□ -2.23
PEPDP12955 RNU6-690P-201ENST00000365242 106 ntBASIC1.11□□□□□ -2.23
PEPDP12955 MIR539-201ENST00000365690 78 ntBASIC1.11□□□□□ -2.23
PEPDP12955 MT-TF-201ENST00000387314 71 ntBASIC1.11□□□□□ -2.23
PEPDP12955 RNU6-1086P-201ENST00000410930 100 ntBASIC1.11□□□□□ -2.23
PEPDP12955 AC098934.3-201ENST00000430450 190 ntBASIC1.11□□□□□ -2.23
PEPDP12955 FABP5P4-201ENST00000437203 171 ntBASIC1.11□□□□□ -2.23
PEPDP12955 AC113410.1-201ENST00000505029 247 ntBASIC1.11□□□□□ -2.23
PEPDP12955 RNU6-426P-201ENST00000516464 97 ntBASIC1.11□□□□□ -2.23
PEPDP12955 RNU6-704P-201ENST00000364162 103 ntBASIC1.1□□□□□ -2.23
PEPDP12955 Y_RNA.299-201ENST00000364973 94 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 181.1 ms