Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RNU6-1299P-201ENST00000516316 100 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 RNU6-1110P-201ENST00000516462 101 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 AL353621.2-201ENST00000605340 133 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 MIR1-1-201ENST00000362147 71 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 Y_RNA.20-201ENST00000362479 113 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 RNU6-369P-201ENST00000362515 102 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 Y_RNA.75-201ENST00000362927 97 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 RNU6-888P-201ENST00000363010 101 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 SNORD18A-201ENST00000363753 72 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 MIR125B2-201ENST00000385128 89 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 RNU6-205P-201ENST00000390858 107 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 RNU4-43P-201ENST00000410628 137 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 RPS26P5-201ENST00000418544 335 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 RNU6-758P-201ENST00000516292 89 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 Y_RNA.680-201ENST00000516441 93 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 MIR3128-201ENST00000581957 66 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 AC091932.4-201ENST00000623386 200 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 Z97988.1-201ENST00000637697 135 ntBASIC0.31□□□□□ -2.36
COL11A1P12107 MIR377-201ENST00000362145 69 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 snoU2_19.4-201ENST00000364329 80 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 SNORD114-15-201ENST00000364687 72 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 RNU6-818P-201ENST00000364837 108 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 RNU6-1335P-201ENST00000365426 107 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 RNU6-597P-201ENST00000365620 102 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 RNU6-514P-201ENST00000384208 107 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 RNU6-574P-201ENST00000384265 107 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 RNU6-196P-201ENST00000384315 107 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 MIR548I3-201ENST00000408378 149 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 RNU6-994P-201ENST00000410507 111 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.3□□□□□ -2.36
COL11A1P12107 RPL39P25-201ENST00000449384 154 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 RNU7-80P-201ENST00000459562 61 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 MTND1P19-201ENST00000511780 315 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 RNU6-448P-201ENST00000517052 107 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 MIR3129-201ENST00000581095 76 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 MIR5190-201ENST00000581537 80 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 MIR4305-201ENST00000583252 102 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 AC009779.6-201ENST00000603972 165 ntBASIC0.3□□□□□ -2.36
COL11A1P12107 MIR409-201ENST00000362237 79 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 MIR367-201ENST00000362299 68 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 Y_RNA.357-201ENST00000365487 109 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 Y_RNA.461-201ENST00000384263 103 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 MIR520H-201ENST00000385126 88 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 MT-TF-201ENST00000387314 71 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 AL078595.1-201ENST00000404458 226 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 Y_RNA.622-201ENST00000411091 108 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 RNU5E-9P-201ENST00000411164 104 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 RNU6-938P-201ENST00000411285 103 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 MTND3P2-201ENST00000438452 342 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 SNORD116-25-201ENST00000516517 92 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 IGLVI-20-201ENST00000519296 130 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.29□□□□□ -2.36
COL11A1P12107 AC131055.1-201ENST00000584626 316 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 RNU2-4P-201ENST00000606190 192 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 AC104465.1-201ENST00000611365 139 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 U2.14-201ENST00000615943 113 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
COL11A1P12107 RNU6-379P-201ENST00000363813 104 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 RNU6-949P-201ENST00000384040 107 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 MIR1827-201ENST00000408549 66 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 Y_RNA.618-201ENST00000410949 107 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 Y_RNA.626-201ENST00000411288 95 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 MTND2P23-201ENST00000422990 651 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 RNU7-185P-201ENST00000459215 60 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 AC090897.1-201ENST00000580909 226 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 AL662814.1-201ENST00000617364 121 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 AC023934.1-201ENST00000574529 2389 ntBASIC0.29□□□□□ -2.36
COL11A1P12107 RNU6-349P-201ENST00000362402 107 ntBASIC0.28□□□□□ -2.36
COL11A1P12107 RNU6-1082P-201ENST00000364574 107 ntBASIC0.28□□□□□ -2.36
COL11A1P12107 SNORA51.10-201ENST00000384418 136 ntBASIC0.28□□□□□ -2.36
COL11A1P12107 RNU7-102P-201ENST00000458948 62 ntBASIC0.28□□□□□ -2.36
COL11A1P12107 MIR2115-201ENST00000516657 100 ntBASIC0.28□□□□□ -2.36
COL11A1P12107 RNU7-70P-201ENST00000516941 66 ntBASIC0.28□□□□□ -2.36
COL11A1P12107 AL365265.1-201ENST00000621045 234 ntBASIC0.28□□□□□ -2.36
COL11A1P12107 MTND5P32-201ENST00000560711 1802 ntBASIC0.28□□□□□ -2.36
COL11A1P12107 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.27□□□□□ -2.37
COL11A1P12107 MIR411-201ENST00000362239 96 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 RNU6-923P-201ENST00000364753 107 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
COL11A1P12107 MT-TG-201ENST00000387429 68 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.27□□□□□ -2.37
COL11A1P12107 AL118496.2-201ENST00000448300 230 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.27□□□□□ -2.37
COL11A1P12107 RNU6-893P-201ENST00000458841 100 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 RNU7-62P-201ENST00000458856 62 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 MTATP8P1-201ENST00000467115 207 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 RNU6-1023P-201ENST00000516137 106 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 MTND5P34-201ENST00000568888 325 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 AC011195.1-201ENST00000578177 177 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 MIR4491-201ENST00000581087 68 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 MIR3149-201ENST00000584629 83 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 SNORD92-201ENST00000585078 85 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 Y_RNA.149-201ENST00000363558 117 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 RNU6-312P-201ENST00000364629 107 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 Y_RNA.288-201ENST00000364854 92 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 RNU6-702P-201ENST00000364982 107 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 Y_RNA.447-201ENST00000384184 113 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 RNU6-768P-201ENST00000384683 107 ntBASIC0.27□□□□□ -2.37
COL11A1P12107 Y_RNA.571-201ENST00000384753 98 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 1797 ms