Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 U8.17-201ENST00000391292 132 ntBASIC1.33□□□□□ -2.2
LDLRP01130 RNU6-902P-201ENST00000517212 91 ntBASIC1.33□□□□□ -2.2
LDLRP01130 MIR4305-201ENST00000583252 102 ntBASIC1.33□□□□□ -2.2
LDLRP01130 MIR342-201ENST00000362212 99 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-34-201ENST00000362441 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-12-201ENST00000362583 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-29-201ENST00000362834 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-9-201ENST00000362912 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-21-201ENST00000362963 81 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-14-201ENST00000363090 81 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-13-201ENST00000363358 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-41-201ENST00000363608 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-11-201ENST00000363616 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-5-201ENST00000363633 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-39-201ENST00000363694 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-4-201ENST00000363810 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-16-201ENST00000363887 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-6-201ENST00000363942 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-42-201ENST00000364273 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 Y_RNA.241-201ENST00000364470 117 ntBASIC1.32□□□□□ -2.2
LDLRP01130 RNU4-16P-201ENST00000364737 141 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-15-201ENST00000364809 81 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-1-201ENST00000364961 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-26-201ENST00000365067 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-10-201ENST00000365073 81 ntBASIC1.32□□□□□ -2.2
LDLRP01130 Y_RNA.354-201ENST00000365448 111 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-43-201ENST00000365503 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-36-201ENST00000365629 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD28B-201ENST00000390993 75 ntBASIC1.32□□□□□ -2.2
LDLRP01130 AL451046.2-201ENST00000403074 277 ntBASIC1.32□□□□□ -2.2
LDLRP01130 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
LDLRP01130 RNU7-164P-201ENST00000459221 62 ntBASIC1.32□□□□□ -2.2
LDLRP01130 RNU7-80P-201ENST00000459562 61 ntBASIC1.32□□□□□ -2.2
LDLRP01130 RNU6-998P-201ENST00000515894 101 ntBASIC1.32□□□□□ -2.2
LDLRP01130 RNU2-13P-201ENST00000515909 113 ntBASIC1.32□□□□□ -2.2
LDLRP01130 RNA5SP170-201ENST00000517150 101 ntBASIC1.32□□□□□ -2.2
LDLRP01130 AC090821.2-201ENST00000523552 176 ntBASIC1.32□□□□□ -2.2
LDLRP01130 AL512310.8-201ENST00000550183 120 ntBASIC1.32□□□□□ -2.2
LDLRP01130 SNORD115-40-201ENST00000606510 82 ntBASIC1.32□□□□□ -2.2
LDLRP01130 PVT1_3.1-201ENST00000620853 95 ntBASIC1.32□□□□□ -2.2
LDLRP01130 Y_RNA.344-201ENST00000365381 112 ntBASIC1.31□□□□□ -2.2
LDLRP01130 Y_RNA.362-201ENST00000365518 110 ntBASIC1.31□□□□□ -2.2
LDLRP01130 Y_RNA.495-201ENST00000384435 112 ntBASIC1.31□□□□□ -2.2
LDLRP01130 MIR452-201ENST00000385020 85 ntBASIC1.31□□□□□ -2.2
LDLRP01130 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.31□□□□□ -2.2
LDLRP01130 AL512326.2-201ENST00000426359 151 ntBASIC1.31□□□□□ -2.2
LDLRP01130 RNU7-45P-201ENST00000459460 63 ntBASIC1.31□□□□□ -2.2
LDLRP01130 RPS29P24-201ENST00000486345 171 ntBASIC1.31□□□□□ -2.2
LDLRP01130 RNU6-322P-201ENST00000516010 103 ntBASIC1.31□□□□□ -2.2
LDLRP01130 RNU6-947P-201ENST00000516264 106 ntBASIC1.31□□□□□ -2.2
LDLRP01130 RNU6-1258P-201ENST00000516911 111 ntBASIC1.31□□□□□ -2.2
LDLRP01130 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.31□□□□□ -2.2
LDLRP01130 AL513534.2-201ENST00000603836 250 ntBASIC1.31□□□□□ -2.2
LDLRP01130 RNU6-94P-201ENST00000607728 107 ntBASIC1.31□□□□□ -2.2
LDLRP01130 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
LDLRP01130 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
LDLRP01130 Y_RNA.43-201ENST00000362670 111 ntBASIC1.3□□□□□ -2.2
LDLRP01130 SNORA63.5-201ENST00000363548 123 ntBASIC1.3□□□□□ -2.2
LDLRP01130 Y_RNA.323-201ENST00000365157 109 ntBASIC1.3□□□□□ -2.2
LDLRP01130 Y_RNA.328-201ENST00000365208 113 ntBASIC1.3□□□□□ -2.2
LDLRP01130 RNU6-1014P-201ENST00000383940 103 ntBASIC1.3□□□□□ -2.2
LDLRP01130 MIR653-201ENST00000385279 96 ntBASIC1.3□□□□□ -2.2
LDLRP01130 RNA5SP144-201ENST00000410846 116 ntBASIC1.3□□□□□ -2.2
LDLRP01130 POLR2J4-204ENST00000418424 324 ntBASIC1.3□□□□□ -2.2
LDLRP01130 AL031737.1-201ENST00000450125 223 ntBASIC1.3□□□□□ -2.2
LDLRP01130 RNU2-11P-201ENST00000459191 187 ntBASIC1.3□□□□□ -2.2
LDLRP01130 RNU7-96P-201ENST00000459535 64 ntBASIC1.3□□□□□ -2.2
LDLRP01130 RNU7-70P-201ENST00000516941 66 ntBASIC1.3□□□□□ -2.2
LDLRP01130 CYP3A52P-201ENST00000563326 91 ntBASIC1.3□□□□□ -2.2
LDLRP01130 MIR3664-201ENST00000579074 99 ntBASIC1.3□□□□□ -2.2
LDLRP01130 MIR548AR-201ENST00000582191 57 ntBASIC1.3□□□□□ -2.2
LDLRP01130 RNU6-1255P-201ENST00000363434 112 ntBASIC1.29□□□□□ -2.2
LDLRP01130 RNY4P6-201ENST00000363667 96 ntBASIC1.29□□□□□ -2.2
LDLRP01130 Y_RNA.163-201ENST00000363702 113 ntBASIC1.29□□□□□ -2.2
LDLRP01130 RNU1-93P-201ENST00000364704 169 ntBASIC1.29□□□□□ -2.2
LDLRP01130 Y_RNA.309-201ENST00000365046 111 ntBASIC1.29□□□□□ -2.2
LDLRP01130 Y_RNA.454-201ENST00000384224 113 ntBASIC1.29□□□□□ -2.2
LDLRP01130 RNU6-342P-201ENST00000384521 104 ntBASIC1.29□□□□□ -2.2
LDLRP01130 SNORD41-201ENST00000386967 70 ntBASIC1.29□□□□□ -2.2
LDLRP01130 SNORA26.6-201ENST00000391256 115 ntBASIC1.29□□□□□ -2.2
LDLRP01130 RNU6-1190P-201ENST00000410811 104 ntBASIC1.29□□□□□ -2.2
LDLRP01130 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.29□□□□□ -2.2
LDLRP01130 RNU6-412P-201ENST00000516434 106 ntBASIC1.29□□□□□ -2.2
LDLRP01130 RN7SKP88-201ENST00000516847 250 ntBASIC1.29□□□□□ -2.2
LDLRP01130 GHRLOS.1-201ENST00000610995 70 ntBASIC1.29□□□□□ -2.2
LDLRP01130 7SK.8-201ENST00000612110 250 ntBASIC1.29□□□□□ -2.2
LDLRP01130 7SK.11-201ENST00000615477 250 ntBASIC1.29□□□□□ -2.2
LDLRP01130 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.29□□□□□ -2.2
LDLRP01130 AC087741.2-201ENST00000619415 172 ntBASIC1.29□□□□□ -2.2
LDLRP01130 7SK.13-201ENST00000622040 250 ntBASIC1.29□□□□□ -2.2
LDLRP01130 AC021613.1-201ENST00000623880 111 ntBASIC1.29□□□□□ -2.2
LDLRP01130 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
LDLRP01130 U8.6-201ENST00000364939 135 ntBASIC1.28□□□□□ -2.2
LDLRP01130 Y_RNA.348-201ENST00000365403 103 ntBASIC1.28□□□□□ -2.2
LDLRP01130 Y_RNA.370-201ENST00000365589 108 ntBASIC1.28□□□□□ -2.2
LDLRP01130 RNU6-32P-201ENST00000383948 107 ntBASIC1.28□□□□□ -2.2
LDLRP01130 SNORA24-201ENST00000384096 131 ntBASIC1.28□□□□□ -2.2
LDLRP01130 RNU6-13P-201ENST00000384248 107 ntBASIC1.28□□□□□ -2.2
LDLRP01130 RNU6-905P-201ENST00000384434 107 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms