Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 Y_RNA.711-201ENST00000516993 102 ntBASIC0□□□□□ -2.41
MBD3O95983 SCARNA16.5-201ENST00000517114 183 ntBASIC0□□□□□ -2.41
MBD3O95983 AC141846.1-201ENST00000568348 142 ntBASIC0□□□□□ -2.41
MBD3O95983 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0□□□□□ -2.41
MBD3O95983 AL365205.2-201ENST00000594586 68 ntBASIC0□□□□□ -2.41
MBD3O95983 MIR6718-201ENST00000616153 80 ntBASIC0□□□□□ -2.41
MBD3O95983 AC091932.4-201ENST00000623386 200 ntBASIC0□□□□□ -2.41
MBD3O95983 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 SNORA9.1-201ENST00000362412 131 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 RNU6-949P-201ENST00000384040 107 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 MT-TT-201ENST00000387460 66 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 RNU4-43P-201ENST00000410628 137 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 RNU6-893P-201ENST00000458841 100 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 RNA5SP227-201ENST00000516184 113 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 RNA5SP47-201ENST00000517230 109 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 MIR4491-201ENST00000581087 68 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 MIR376A2-201ENST00000636782 80 ntBASIC-0.01□□□□□ -2.41
MBD3O95983 RNA5SP214-201ENST00000363378 118 ntBASIC-0.02□□□□□ -2.41
MBD3O95983 SNORA20-201ENST00000384662 132 ntBASIC-0.02□□□□□ -2.41
MBD3O95983 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.02□□□□□ -2.41
MBD3O95983 RNU7-45P-201ENST00000459460 63 ntBASIC-0.02□□□□□ -2.41
MBD3O95983 MIR5190-201ENST00000581537 80 ntBASIC-0.02□□□□□ -2.41
MBD3O95983 MIR4639-201ENST00000584938 69 ntBASIC-0.02□□□□□ -2.41
MBD3O95983 AC091304.10-201ENST00000641554 121 ntBASIC-0.02□□□□□ -2.41
MBD3O95983 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.02□□□□□ -2.41
MBD3O95983 MTND4P29-201ENST00000503122 1372 ntBASIC-0.03□□□□□ -2.41
MBD3O95983 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
MBD3O95983 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.03□□□□□ -2.41
MBD3O95983 RNU6-403P-201ENST00000363163 104 ntBASIC-0.03□□□□□ -2.41
MBD3O95983 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.03□□□□□ -2.41
MBD3O95983 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.03□□□□□ -2.41
MBD3O95983 SNORA79-201ENST00000408376 140 ntBASIC-0.03□□□□□ -2.41
MBD3O95983 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.03□□□□□ -2.41
MBD3O95983 AC096949.1-201ENST00000412047 152 ntBASIC-0.03□□□□□ -2.41
MBD3O95983 SEPT7P4-201ENST00000437076 306 ntBASIC-0.03□□□□□ -2.41
MBD3O95983 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.03□□□□□ -2.41
MBD3O95983 SNORA31.14-201ENST00000516728 116 ntBASIC-0.03□□□□□ -2.41
MBD3O95983 MIR4667-201ENST00000578933 66 ntBASIC-0.03□□□□□ -2.41
MBD3O95983 MIR7107-201ENST00000611489 80 ntBASIC-0.03□□□□□ -2.41
MBD3O95983 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.04□□□□□ -2.42
MBD3O95983 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.04□□□□□ -2.42
MBD3O95983 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.04□□□□□ -2.42
MBD3O95983 MIR548P-201ENST00000408336 84 ntBASIC-0.04□□□□□ -2.42
MBD3O95983 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.04□□□□□ -2.42
MBD3O95983 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.04□□□□□ -2.42
MBD3O95983 AC141557.1-201ENST00000540982 400 ntBASIC-0.04□□□□□ -2.42
MBD3O95983 MIR4680-201ENST00000580906 66 ntBASIC-0.04□□□□□ -2.42
MBD3O95983 MIR4282-201ENST00000583613 67 ntBASIC-0.04□□□□□ -2.42
MBD3O95983 MIR4290-201ENST00000583807 95 ntBASIC-0.04□□□□□ -2.42
MBD3O95983 MIR4743-201ENST00000584576 69 ntBASIC-0.04□□□□□ -2.42
MBD3O95983 MIR6755-201ENST00000619993 66 ntBASIC-0.04□□□□□ -2.42
MBD3O95983 AC021613.1-201ENST00000623880 111 ntBASIC-0.04□□□□□ -2.42
MBD3O95983 MIR335-201ENST00000362173 94 ntBASIC-0.05□□□□□ -2.42
MBD3O95983 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.05□□□□□ -2.42
MBD3O95983 RNU6-728P-201ENST00000365375 104 ntBASIC-0.05□□□□□ -2.42
MBD3O95983 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.05□□□□□ -2.42
MBD3O95983 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.05□□□□□ -2.42
MBD3O95983 SNORD28-201ENST00000384706 75 ntBASIC-0.05□□□□□ -2.42
MBD3O95983 MTATP6P23-201ENST00000440153 476 ntBASIC-0.05□□□□□ -2.42
MBD3O95983 RNU6-453P-201ENST00000516819 85 ntBASIC-0.05□□□□□ -2.42
MBD3O95983 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.05□□□□□ -2.42
MBD3O95983 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.05□□□□□ -2.42
MBD3O95983 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.05□□□□□ -2.42
MBD3O95983 MIR3129-201ENST00000581095 76 ntBASIC-0.05□□□□□ -2.42
MBD3O95983 SNORA22.1-201ENST00000362701 134 ntBASIC-0.06□□□□□ -2.42
MBD3O95983 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.06□□□□□ -2.42
MBD3O95983 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.06□□□□□ -2.42
MBD3O95983 MIR329-2-201ENST00000385029 84 ntBASIC-0.06□□□□□ -2.42
MBD3O95983 RNU6-381P-201ENST00000391259 108 ntBASIC-0.06□□□□□ -2.42
MBD3O95983 AC069271.1-201ENST00000445577 156 ntBASIC-0.06□□□□□ -2.42
MBD3O95983 RNA5SP285-201ENST00000516619 119 ntBASIC-0.06□□□□□ -2.42
MBD3O95983 AL596211.1-201ENST00000569873 2277 ntBASIC-0.06□□□□□ -2.42
MBD3O95983 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.07□□□□□ -2.42
MBD3O95983 RNU6-597P-201ENST00000365620 102 ntBASIC-0.07□□□□□ -2.42
MBD3O95983 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.07□□□□□ -2.42
MBD3O95983 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.07□□□□□ -2.42
MBD3O95983 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.07□□□□□ -2.42
MBD3O95983 RNU6-291P-201ENST00000384720 107 ntBASIC-0.07□□□□□ -2.42
MBD3O95983 MIR2909-201ENST00000617113 69 ntBASIC-0.07□□□□□ -2.42
MBD3O95983 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.08□□□□□ -2.42
MBD3O95983 RNU6-103P-201ENST00000363686 107 ntBASIC-0.08□□□□□ -2.42
MBD3O95983 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.08□□□□□ -2.42
MBD3O95983 RNU6-302P-201ENST00000365249 107 ntBASIC-0.08□□□□□ -2.42
MBD3O95983 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.08□□□□□ -2.42
MBD3O95983 RNU7-70P-201ENST00000516941 66 ntBASIC-0.08□□□□□ -2.42
MBD3O95983 AP003072.1-201ENST00000531740 145 ntBASIC-0.08□□□□□ -2.42
MBD3O95983 AC104408.1-201ENST00000605241 170 ntBASIC-0.08□□□□□ -2.42
MBD3O95983 U2.14-201ENST00000615943 113 ntBASIC-0.08□□□□□ -2.42
MBD3O95983 AL365265.1-201ENST00000621045 234 ntBASIC-0.08□□□□□ -2.42
MBD3O95983 MIR610-201ENST00000385139 96 ntBASIC-0.09□□□□□ -2.42
MBD3O95983 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
MBD3O95983 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.09□□□□□ -2.42
MBD3O95983 RNU6-985P-201ENST00000410182 104 ntBASIC-0.09□□□□□ -2.42
MBD3O95983 RNU6-570P-201ENST00000517051 105 ntBASIC-0.09□□□□□ -2.42
MBD3O95983 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 184.6 ms