Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 RNU7-200P-201ENST00000516105 62 ntBASIC0.94□□□□□ -2.26
CLDN1O95832 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.94□□□□□ -2.26
CLDN1O95832 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CLDN1O95832 RNU6-580P-201ENST00000365159 107 ntBASIC0.93□□□□□ -2.26
CLDN1O95832 RNU6-396P-201ENST00000365369 105 ntBASIC0.93□□□□□ -2.26
CLDN1O95832 RNU6-125P-201ENST00000384505 107 ntBASIC0.93□□□□□ -2.26
CLDN1O95832 RNU6-1319P-201ENST00000390855 104 ntBASIC0.93□□□□□ -2.26
CLDN1O95832 RNU6-747P-201ENST00000390928 104 ntBASIC0.93□□□□□ -2.26
CLDN1O95832 RNU6-241P-201ENST00000391148 104 ntBASIC0.93□□□□□ -2.26
CLDN1O95832 RNU6-177P-201ENST00000411257 104 ntBASIC0.93□□□□□ -2.26
CLDN1O95832 MIR4264-201ENST00000583520 66 ntBASIC0.93□□□□□ -2.26
CLDN1O95832 AL590095.2-201ENST00000604136 117 ntBASIC0.93□□□□□ -2.26
CLDN1O95832 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.93□□□□□ -2.26
CLDN1O95832 MIR6717-201ENST00000622747 73 ntBASIC0.93□□□□□ -2.26
CLDN1O95832 RNU6-349P-201ENST00000362402 107 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 Y_RNA.168-201ENST00000363740 102 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 RNU6-654P-201ENST00000364373 107 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 SNORA22-201ENST00000383907 134 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 Y_RNA.433-201ENST00000384089 102 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 Y_RNA.506-201ENST00000384494 102 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 SNORA22C-201ENST00000384614 134 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 MIR569-201ENST00000385228 96 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 Y_RNA.584-201ENST00000391090 114 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 RNA5SP261-201ENST00000410536 106 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 RNU6-602P-201ENST00000411155 105 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 AC063976.4-201ENST00000421971 163 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 RPS29P28-201ENST00000446439 141 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.92□□□□□ -2.26
CLDN1O95832 RNU7-90P-201ENST00000459216 62 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.92□□□□□ -2.26
CLDN1O95832 AC011603.4-201ENST00000611325 277 ntBASIC0.92□□□□□ -2.26
CLDN1O95832 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
CLDN1O95832 MIR302B-201ENST00000362188 73 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 Y_RNA.8-201ENST00000362353 102 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 Y_RNA.215-201ENST00000364204 112 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 SNORA1.1-201ENST00000364671 133 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 RNY1P6-201ENST00000384193 109 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 AL603914.1-201ENST00000401964 204 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 AC244023.1-201ENST00000426884 112 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 AC002429.1-201ENST00000437672 148 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 MTATP6P21-201ENST00000440681 189 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 RNA5SP404-201ENST00000517118 132 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.91□□□□□ -2.26
CLDN1O95832 MIR548X2-201ENST00000579776 100 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.91□□□□□ -2.26
CLDN1O95832 AC242498.1-201ENST00000604134 111 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 SNORD114-21-201ENST00000606412 72 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 AC021613.1-201ENST00000623880 111 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 AP001340.1-201ENST00000624405 217 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.91□□□□□ -2.26
CLDN1O95832 AL596211.1-201ENST00000569873 2277 ntBASIC0.91□□□□□ -2.26
CLDN1O95832 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
CLDN1O95832 MIR342-201ENST00000362212 99 ntBASIC0.9□□□□□ -2.27
CLDN1O95832 RNU6-1062P-201ENST00000383908 107 ntBASIC0.9□□□□□ -2.27
CLDN1O95832 MRPL35P3-201ENST00000421557 364 ntBASIC0.9□□□□□ -2.27
CLDN1O95832 Y_RNA.651-201ENST00000459380 103 ntBASIC0.9□□□□□ -2.27
CLDN1O95832 RNU7-70P-201ENST00000516941 66 ntBASIC0.9□□□□□ -2.27
CLDN1O95832 AC036111.3-201ENST00000526389 112 ntBASIC0.9□□□□□ -2.27
CLDN1O95832 HSPE1P19-201ENST00000603327 295 ntBASIC0.9□□□□□ -2.27
CLDN1O95832 AC106800.4-201ENST00000614905 153 ntBASIC0.9□□□□□ -2.27
CLDN1O95832 MIR563-201ENST00000385080 79 ntBASIC0.89□□□□□ -2.27
CLDN1O95832 MIR513C-201ENST00000401352 84 ntBASIC0.89□□□□□ -2.27
CLDN1O95832 RPS3AP1-201ENST00000413190 320 ntBASIC0.89□□□□□ -2.27
CLDN1O95832 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
CLDN1O95832 RNU7-45P-201ENST00000459460 63 ntBASIC0.89□□□□□ -2.27
CLDN1O95832 Y_RNA.686-201ENST00000516548 134 ntBASIC0.89□□□□□ -2.27
CLDN1O95832 RNA5SP330-201ENST00000517096 96 ntBASIC0.89□□□□□ -2.27
CLDN1O95832 MIR4714-201ENST00000580728 77 ntBASIC0.89□□□□□ -2.27
CLDN1O95832 AC008163.1-202ENST00000636004 2889 ntBASIC0.88□□□□□ -2.27
CLDN1O95832 Y_RNA.280-201ENST00000364765 112 ntBASIC0.88□□□□□ -2.27
CLDN1O95832 SNORD38B-201ENST00000384690 67 ntBASIC0.88□□□□□ -2.27
CLDN1O95832 MIR532-201ENST00000385025 91 ntBASIC0.88□□□□□ -2.27
CLDN1O95832 RNU6-460P-201ENST00000391158 108 ntBASIC0.88□□□□□ -2.27
CLDN1O95832 AP000753.3-201ENST00000604083 169 ntBASIC0.88□□□□□ -2.27
CLDN1O95832 MIR6857-201ENST00000613267 93 ntBASIC0.88□□□□□ -2.27
CLDN1O95832 SNORD38B-202ENST00000625943 69 ntBASIC0.88□□□□□ -2.27
CLDN1O95832 AL391516.1-201ENST00000554380 2449 ntBASIC0.87□□□□□ -2.27
CLDN1O95832 RNU4-38P-201ENST00000364472 129 ntBASIC0.87□□□□□ -2.27
CLDN1O95832 Y_RNA.258-201ENST00000364613 105 ntBASIC0.87□□□□□ -2.27
CLDN1O95832 SNORD113.3-201ENST00000364630 78 ntBASIC0.87□□□□□ -2.27
CLDN1O95832 SNORD111-201ENST00000408139 94 ntBASIC0.87□□□□□ -2.27
CLDN1O95832 RNA5SP95-201ENST00000410319 137 ntBASIC0.87□□□□□ -2.27
CLDN1O95832 RNA5SP144-201ENST00000410846 116 ntBASIC0.87□□□□□ -2.27
CLDN1O95832 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.87□□□□□ -2.27
CLDN1O95832 SNORA25.12-201ENST00000516202 82 ntBASIC0.87□□□□□ -2.27
CLDN1O95832 Y_RNA.690-201ENST00000516603 95 ntBASIC0.87□□□□□ -2.27
CLDN1O95832 MIR3152-201ENST00000579801 74 ntBASIC0.87□□□□□ -2.27
CLDN1O95832 MIR6740-201ENST00000618268 113 ntBASIC0.87□□□□□ -2.27
CLDN1O95832 SNORA22.1-201ENST00000362701 134 ntBASIC0.86□□□□□ -2.27
CLDN1O95832 RNU6-915P-201ENST00000364943 103 ntBASIC0.86□□□□□ -2.27
CLDN1O95832 Y_RNA.330-201ENST00000365230 109 ntBASIC0.86□□□□□ -2.27
CLDN1O95832 Y_RNA.420-201ENST00000384043 110 ntBASIC0.86□□□□□ -2.27
CLDN1O95832 Y_RNA.488-201ENST00000384403 102 ntBASIC0.86□□□□□ -2.27
CLDN1O95832 SNORA20-201ENST00000384662 132 ntBASIC0.86□□□□□ -2.27
CLDN1O95832 MIR200A-201ENST00000384875 90 ntBASIC0.86□□□□□ -2.27
CLDN1O95832 RNU6-893P-201ENST00000458841 100 ntBASIC0.86□□□□□ -2.27
CLDN1O95832 snoU13.2-201ENST00000459201 104 ntBASIC0.86□□□□□ -2.27
CLDN1O95832 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
CLDN1O95832 MIR924-201ENST00000638017 53 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 222.1 ms