Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 SNORD36C-201ENST00000516733 66 ntBASIC-0.54□□□□□ -2.5
SHOX2O60902 MIR6507-201ENST00000613630 70 ntBASIC-0.54□□□□□ -2.5
SHOX2O60902 uc_338.19-201ENST00000616808 99 ntBASIC-0.54□□□□□ -2.5
SHOX2O60902 AC099654.14-201ENST00000638599 341 ntBASIC-0.54□□□□□ -2.5
SHOX2O60902 Y_RNA.7-201ENST00000362352 102 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 SNORD115-2-201ENST00000362842 82 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 RNA5SP245-201ENST00000364239 121 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 RNU6-597P-201ENST00000365620 102 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 SNORD63-201ENST00000384262 68 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 RNU6-24P-201ENST00000384440 107 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 SNORA72.6-201ENST00000384520 129 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 RNU6-310P-201ENST00000384655 107 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 RPL21P38-201ENST00000418090 167 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 AC108059.2-201ENST00000434626 151 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 RNU6-274P-201ENST00000459566 107 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 NAMPTP3-201ENST00000569273 224 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 AL049861.1-201ENST00000603130 150 ntBASIC-0.55□□□□□ -2.5
SHOX2O60902 MIR302B-201ENST00000362188 73 ntBASIC-0.56□□□□□ -2.5
SHOX2O60902 MIR101-2-201ENST00000362195 79 ntBASIC-0.56□□□□□ -2.5
SHOX2O60902 RNA5SP93-201ENST00000362525 114 ntBASIC-0.56□□□□□ -2.5
SHOX2O60902 SNORD114-25-201ENST00000363742 72 ntBASIC-0.56□□□□□ -2.5
SHOX2O60902 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.56□□□□□ -2.5
SHOX2O60902 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.56□□□□□ -2.5
SHOX2O60902 RNU6-890P-201ENST00000384121 107 ntBASIC-0.56□□□□□ -2.5
SHOX2O60902 MIR548A2-201ENST00000384956 97 ntBASIC-0.56□□□□□ -2.5
SHOX2O60902 RNU6-308P-201ENST00000390957 107 ntBASIC-0.56□□□□□ -2.5
SHOX2O60902 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.56□□□□□ -2.5
SHOX2O60902 Y_RNA.713-201ENST00000517013 96 ntBASIC-0.56□□□□□ -2.5
SHOX2O60902 RNU6-888P-201ENST00000363010 101 ntBASIC-0.57□□□□□ -2.5
SHOX2O60902 RNU4-80P-201ENST00000363200 141 ntBASIC-0.57□□□□□ -2.5
SHOX2O60902 RNY4P28-201ENST00000365281 93 ntBASIC-0.57□□□□□ -2.5
SHOX2O60902 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.57□□□□□ -2.5
SHOX2O60902 SNORA75.1-201ENST00000391130 148 ntBASIC-0.57□□□□□ -2.5
SHOX2O60902 AC138749.4-201ENST00000563970 127 ntBASIC-0.57□□□□□ -2.5
SHOX2O60902 MIR378D2-201ENST00000580636 98 ntBASIC-0.57□□□□□ -2.5
SHOX2O60902 MIR4499-201ENST00000584834 69 ntBASIC-0.57□□□□□ -2.5
SHOX2O60902 AC133104.2-201ENST00000615272 193 ntBASIC-0.57□□□□□ -2.5
SHOX2O60902 RNU6-490P-201ENST00000362985 107 ntBASIC-0.58□□□□□ -2.5
SHOX2O60902 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.58□□□□□ -2.5
SHOX2O60902 SNORA22B-201ENST00000383876 138 ntBASIC-0.58□□□□□ -2.5
SHOX2O60902 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.58□□□□□ -2.5
SHOX2O60902 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.58□□□□□ -2.5
SHOX2O60902 MT-TY-201ENST00000387409 66 ntBASIC-0.58□□□□□ -2.5
SHOX2O60902 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.58□□□□□ -2.5
SHOX2O60902 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.58□□□□□ -2.5
SHOX2O60902 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.58□□□□□ -2.5
SHOX2O60902 RNU6-365P-201ENST00000517113 106 ntBASIC-0.58□□□□□ -2.5
SHOX2O60902 RNA5SP169-201ENST00000517268 117 ntBASIC-0.58□□□□□ -2.5
SHOX2O60902 AC100767.1-201ENST00000528178 123 ntBASIC-0.58□□□□□ -2.5
SHOX2O60902 AC141846.1-201ENST00000568348 142 ntBASIC-0.58□□□□□ -2.5
SHOX2O60902 AL121655.1-201ENST00000605811 308 ntBASIC-0.58□□□□□ -2.5
SHOX2O60902 AC022079.1-201ENST00000621546 602 ntBASIC-0.58□□□□□ -2.5
SHOX2O60902 MIR367-201ENST00000362299 68 ntBASIC-0.59□□□□□ -2.5
SHOX2O60902 RNU6-226P-201ENST00000363778 107 ntBASIC-0.59□□□□□ -2.5
SHOX2O60902 SNORD61-201ENST00000384252 73 ntBASIC-0.59□□□□□ -2.5
SHOX2O60902 RNU6-880P-201ENST00000384526 107 ntBASIC-0.59□□□□□ -2.5
SHOX2O60902 MTND1P14-201ENST00000427400 950 ntBASIC-0.59□□□□□ -2.5
SHOX2O60902 Y_RNA.691-201ENST00000516611 103 ntBASIC-0.59□□□□□ -2.5
SHOX2O60902 SNORA25.16-201ENST00000516741 121 ntBASIC-0.59□□□□□ -2.5
SHOX2O60902 RNU7-30P-201ENST00000516835 62 ntBASIC-0.59□□□□□ -2.5
SHOX2O60902 AC026407.1-201ENST00000518369 204 ntBASIC-0.59□□□□□ -2.5
SHOX2O60902 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.59□□□□□ -2.5
SHOX2O60902 RNU4-36P-201ENST00000364294 144 ntBASIC-0.6□□□□□ -2.51
SHOX2O60902 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.6□□□□□ -2.51
SHOX2O60902 RNU6-949P-201ENST00000384040 107 ntBASIC-0.6□□□□□ -2.51
SHOX2O60902 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.6□□□□□ -2.51
SHOX2O60902 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.6□□□□□ -2.51
SHOX2O60902 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
SHOX2O60902 MTATP6P26-201ENST00000445926 662 ntBASIC-0.6□□□□□ -2.51
SHOX2O60902 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.6□□□□□ -2.51
SHOX2O60902 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.6□□□□□ -2.51
SHOX2O60902 AP003733.2-201ENST00000529409 171 ntBASIC-0.6□□□□□ -2.51
SHOX2O60902 AC048344.4-201ENST00000619744 527 ntBASIC-0.6□□□□□ -2.51
SHOX2O60902 SNORA63.5-201ENST00000363548 123 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 RNU4-24P-201ENST00000364565 139 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 SNORA1-201ENST00000384107 130 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 MIR1277-201ENST00000408536 78 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 RNU4-14P-201ENST00000410858 122 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 RNU6-383P-201ENST00000410864 94 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 RNU7-45P-201ENST00000459460 63 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 SEPT14P8-201ENST00000508026 178 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 RN7SKP19-201ENST00000516016 252 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 MIR4724-201ENST00000579485 89 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 SNORD113-5-201ENST00000607261 78 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 AC025253.1-201ENST00000613623 543 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 AC002553.4-201ENST00000616896 331 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 AL138825.1-201ENST00000618587 192 ntBASIC-0.61□□□□□ -2.51
SHOX2O60902 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.62□□□□□ -2.51
SHOX2O60902 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.62□□□□□ -2.51
SHOX2O60902 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
SHOX2O60902 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.62□□□□□ -2.51
SHOX2O60902 AC096644.2-201ENST00000429278 159 ntBASIC-0.62□□□□□ -2.51
SHOX2O60902 RNU6-191P-201ENST00000516295 94 ntBASIC-0.62□□□□□ -2.51
SHOX2O60902 RNA5SP66-201ENST00000517178 101 ntBASIC-0.62□□□□□ -2.51
SHOX2O60902 RNU7-161P-201ENST00000517289 62 ntBASIC-0.62□□□□□ -2.51
SHOX2O60902 RPS29P30-201ENST00000600975 111 ntBASIC-0.62□□□□□ -2.51
SHOX2O60902 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 537.1 ms