Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RNA5SP95-201ENST00000410319 137 ntBASIC1.29□□□□□ -2.2
PRPF3O43395 RNU6-602P-201ENST00000411155 105 ntBASIC1.29□□□□□ -2.2
PRPF3O43395 RNU6-177P-201ENST00000411257 104 ntBASIC1.29□□□□□ -2.2
PRPF3O43395 RNU7-197P-201ENST00000458836 62 ntBASIC1.29□□□□□ -2.2
PRPF3O43395 AC023827.1-201ENST00000569247 97 ntBASIC1.29□□□□□ -2.2
PRPF3O43395 MIR4661-201ENST00000582720 75 ntBASIC1.29□□□□□ -2.2
PRPF3O43395 HSPE1P19-201ENST00000603327 295 ntBASIC1.29□□□□□ -2.2
PRPF3O43395 RNU4-16P-201ENST00000364737 141 ntBASIC1.28□□□□□ -2.2
PRPF3O43395 RNU6-460P-201ENST00000391158 108 ntBASIC1.28□□□□□ -2.2
PRPF3O43395 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.28□□□□□ -2.2
PRPF3O43395 Y_RNA.686-201ENST00000516548 134 ntBASIC1.28□□□□□ -2.2
PRPF3O43395 RNA5SP480-201ENST00000516840 109 ntBASIC1.28□□□□□ -2.2
PRPF3O43395 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
PRPF3O43395 SNORD114-22-201ENST00000365423 72 ntBASIC1.27□□□□□ -2.21
PRPF3O43395 SNORA2B-201ENST00000384583 137 ntBASIC1.27□□□□□ -2.21
PRPF3O43395 Y_RNA.540-201ENST00000384638 111 ntBASIC1.27□□□□□ -2.21
PRPF3O43395 RNU6-205P-201ENST00000390858 107 ntBASIC1.27□□□□□ -2.21
PRPF3O43395 RNU7-200P-201ENST00000516105 62 ntBASIC1.27□□□□□ -2.21
PRPF3O43395 Y_RNA.690-201ENST00000516603 95 ntBASIC1.27□□□□□ -2.21
PRPF3O43395 AC036111.3-201ENST00000526389 112 ntBASIC1.27□□□□□ -2.21
PRPF3O43395 AC011603.4-201ENST00000611325 277 ntBASIC1.27□□□□□ -2.21
PRPF3O43395 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.27□□□□□ -2.21
PRPF3O43395 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
PRPF3O43395 RNU6-349P-201ENST00000362402 107 ntBASIC1.26□□□□□ -2.21
PRPF3O43395 Y_RNA.488-201ENST00000384403 102 ntBASIC1.26□□□□□ -2.21
PRPF3O43395 AL603914.1-201ENST00000401964 204 ntBASIC1.26□□□□□ -2.21
PRPF3O43395 AC244023.1-201ENST00000426884 112 ntBASIC1.26□□□□□ -2.21
PRPF3O43395 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.26□□□□□ -2.21
PRPF3O43395 AC242498.1-201ENST00000604134 111 ntBASIC1.26□□□□□ -2.21
PRPF3O43395 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.25□□□□□ -2.21
PRPF3O43395 RNU6-690P-201ENST00000365242 106 ntBASIC1.25□□□□□ -2.21
PRPF3O43395 MIR569-201ENST00000385228 96 ntBASIC1.25□□□□□ -2.21
PRPF3O43395 SNORA22.1-201ENST00000362701 134 ntBASIC1.24□□□□□ -2.21
PRPF3O43395 MIR1285-1-201ENST00000408593 84 ntBASIC1.24□□□□□ -2.21
PRPF3O43395 RNU6-994P-201ENST00000410507 111 ntBASIC1.24□□□□□ -2.21
PRPF3O43395 U7.7-201ENST00000459276 60 ntBASIC1.24□□□□□ -2.21
PRPF3O43395 UBL5P1-201ENST00000507979 193 ntBASIC1.24□□□□□ -2.21
PRPF3O43395 AC025627.3-201ENST00000582078 182 ntBASIC1.24□□□□□ -2.21
PRPF3O43395 MIR4295-201ENST00000585286 85 ntBASIC1.24□□□□□ -2.21
PRPF3O43395 RNU6-508P-201ENST00000363231 103 ntBASIC1.23□□□□□ -2.21
PRPF3O43395 RNU6-309P-201ENST00000364573 106 ntBASIC1.23□□□□□ -2.21
PRPF3O43395 RNU6-915P-201ENST00000364943 103 ntBASIC1.23□□□□□ -2.21
PRPF3O43395 RNY1P5-201ENST00000383890 115 ntBASIC1.23□□□□□ -2.21
PRPF3O43395 MIR942-201ENST00000401111 86 ntBASIC1.23□□□□□ -2.21
PRPF3O43395 RNU7-62P-201ENST00000458856 62 ntBASIC1.23□□□□□ -2.21
PRPF3O43395 RNU6-1110P-201ENST00000516462 101 ntBASIC1.23□□□□□ -2.21
PRPF3O43395 RNU6-113P-201ENST00000516653 101 ntBASIC1.23□□□□□ -2.21
PRPF3O43395 AP001328.1-201ENST00000528550 176 ntBASIC1.23□□□□□ -2.21
PRPF3O43395 SNORD114-21-201ENST00000606412 72 ntBASIC1.23□□□□□ -2.21
PRPF3O43395 MIR6841-201ENST00000637129 72 ntBASIC1.23□□□□□ -2.21
PRPF3O43395 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.23□□□□□ -2.21
PRPF3O43395 RNU6-1062P-201ENST00000383908 107 ntBASIC1.22□□□□□ -2.21
PRPF3O43395 Y_RNA.420-201ENST00000384043 110 ntBASIC1.22□□□□□ -2.21
PRPF3O43395 SNORD12C-201ENST00000386307 89 ntBASIC1.22□□□□□ -2.21
PRPF3O43395 RPS29P28-201ENST00000446439 141 ntBASIC1.22□□□□□ -2.21
PRPF3O43395 MIR18B-201ENST00000454574 71 ntBASIC1.22□□□□□ -2.21
PRPF3O43395 Y_RNA.651-201ENST00000459380 103 ntBASIC1.22□□□□□ -2.21
PRPF3O43395 RNU5E-3P-201ENST00000515913 68 ntBASIC1.22□□□□□ -2.21
PRPF3O43395 RNU6-240P-201ENST00000516098 97 ntBASIC1.22□□□□□ -2.21
PRPF3O43395 RNU6-426P-201ENST00000516464 97 ntBASIC1.22□□□□□ -2.21
PRPF3O43395 RNU6-94P-201ENST00000607728 107 ntBASIC1.22□□□□□ -2.21
PRPF3O43395 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
PRPF3O43395 Y_RNA.506-201ENST00000384494 102 ntBASIC1.21□□□□□ -2.22
PRPF3O43395 MIR588-201ENST00000384900 83 ntBASIC1.21□□□□□ -2.22
PRPF3O43395 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.21□□□□□ -2.22
PRPF3O43395 POLR2J4-204ENST00000418424 324 ntBASIC1.21□□□□□ -2.22
PRPF3O43395 SNORD124-201ENST00000459577 104 ntBASIC1.21□□□□□ -2.22
PRPF3O43395 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
PRPF3O43395 RNU6-346P-201ENST00000516288 111 ntBASIC1.21□□□□□ -2.22
PRPF3O43395 AP001340.1-201ENST00000624405 217 ntBASIC1.21□□□□□ -2.22
PRPF3O43395 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
PRPF3O43395 SNORD114-26-201ENST00000363543 72 ntBASIC1.2□□□□□ -2.22
PRPF3O43395 Y_RNA.343-201ENST00000365354 112 ntBASIC1.2□□□□□ -2.22
PRPF3O43395 RNA5SP144-201ENST00000410846 116 ntBASIC1.2□□□□□ -2.22
PRPF3O43395 snoU13.2-201ENST00000459201 104 ntBASIC1.2□□□□□ -2.22
PRPF3O43395 Y_RNA.692-201ENST00000516627 105 ntBASIC1.2□□□□□ -2.22
PRPF3O43395 AC133485.4-201ENST00000561835 220 ntBASIC1.2□□□□□ -2.22
PRPF3O43395 AC138907.4-201ENST00000570107 226 ntBASIC1.2□□□□□ -2.22
PRPF3O43395 AC022709.1-201ENST00000615967 87 ntBASIC1.2□□□□□ -2.22
PRPF3O43395 MIR6740-201ENST00000618268 113 ntBASIC1.2□□□□□ -2.22
PRPF3O43395 MIR6515-201ENST00000619843 57 ntBASIC1.2□□□□□ -2.22
PRPF3O43395 AL022718.1-201ENST00000412004 84 ntBASIC1.19□□□□□ -2.22
PRPF3O43395 PDCD5P2-201ENST00000507570 312 ntBASIC1.19□□□□□ -2.22
PRPF3O43395 RNA5SP272-201ENST00000516095 111 ntBASIC1.19□□□□□ -2.22
PRPF3O43395 RNU6-1223P-201ENST00000517124 104 ntBASIC1.19□□□□□ -2.22
PRPF3O43395 Y_RNA.757-201ENST00000578934 114 ntBASIC1.19□□□□□ -2.22
PRPF3O43395 MIR1-1-201ENST00000362147 71 ntBASIC1.18□□□□□ -2.22
PRPF3O43395 RNU1-93P-201ENST00000364704 169 ntBASIC1.18□□□□□ -2.22
PRPF3O43395 MT-TF-201ENST00000387314 71 ntBASIC1.18□□□□□ -2.22
PRPF3O43395 MIR3121-201ENST00000579680 77 ntBASIC1.18□□□□□ -2.22
PRPF3O43395 MIR4305-201ENST00000583252 102 ntBASIC1.18□□□□□ -2.22
PRPF3O43395 MIR151B-201ENST00000584249 96 ntBASIC1.18□□□□□ -2.22
PRPF3O43395 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.18□□□□□ -2.22
PRPF3O43395 AC021443.1-201ENST00000604478 211 ntBASIC1.18□□□□□ -2.22
PRPF3O43395 RNU4-38P-201ENST00000364472 129 ntBASIC1.17□□□□□ -2.22
PRPF3O43395 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.17□□□□□ -2.22
PRPF3O43395 RNA5SP255-201ENST00000516370 107 ntBASIC1.17□□□□□ -2.22
PRPF3O43395 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.17□□□□□ -2.22
PRPF3O43395 AC010332.2-201ENST00000613083 1904 ntBASIC1.17□□□□□ -2.22
PRPF3O43395 Y_RNA.171-201ENST00000363760 102 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms