Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 SNORA53-201ENST00000391141 249 ntBASIC-0.34□□□□□ -2.46
CLOCKO15516 AC108059.2-201ENST00000434626 151 ntBASIC-0.34□□□□□ -2.46
CLOCKO15516 SNORD4A-201ENST00000459174 72 ntBASIC-0.34□□□□□ -2.46
CLOCKO15516 SNORA27.4-201ENST00000516650 95 ntBASIC-0.34□□□□□ -2.46
CLOCKO15516 RNU6-897P-201ENST00000517135 105 ntBASIC-0.34□□□□□ -2.46
CLOCKO15516 MIR548AD-201ENST00000584780 82 ntBASIC-0.34□□□□□ -2.46
CLOCKO15516 AC097639.2-201ENST00000603159 172 ntBASIC-0.34□□□□□ -2.46
CLOCKO15516 SNORA70.25-201ENST00000612741 95 ntBASIC-0.34□□□□□ -2.46
CLOCKO15516 AC091932.4-201ENST00000623386 200 ntBASIC-0.34□□□□□ -2.46
CLOCKO15516 MIR6841-201ENST00000637129 72 ntBASIC-0.34□□□□□ -2.46
CLOCKO15516 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.35□□□□□ -2.47
CLOCKO15516 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.35□□□□□ -2.47
CLOCKO15516 SNORA1-201ENST00000384107 130 ntBASIC-0.35□□□□□ -2.47
CLOCKO15516 RNU6-180P-201ENST00000516697 61 ntBASIC-0.35□□□□□ -2.47
CLOCKO15516 AP003072.1-201ENST00000531740 145 ntBASIC-0.35□□□□□ -2.47
CLOCKO15516 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.35□□□□□ -2.47
CLOCKO15516 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.36□□□□□ -2.47
CLOCKO15516 RNU6-726P-201ENST00000364680 107 ntBASIC-0.36□□□□□ -2.47
CLOCKO15516 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.36□□□□□ -2.47
CLOCKO15516 RNY3P5-201ENST00000384127 102 ntBASIC-0.36□□□□□ -2.47
CLOCKO15516 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.36□□□□□ -2.47
CLOCKO15516 MIR626-201ENST00000385032 94 ntBASIC-0.36□□□□□ -2.47
CLOCKO15516 SNRPGP8-201ENST00000454064 226 ntBASIC-0.36□□□□□ -2.47
CLOCKO15516 RNU6-320P-201ENST00000516511 106 ntBASIC-0.36□□□□□ -2.47
CLOCKO15516 AP001180.6-201ENST00000584918 159 ntBASIC-0.36□□□□□ -2.47
CLOCKO15516 AL162376.1-201ENST00000624117 175 ntBASIC-0.36□□□□□ -2.47
CLOCKO15516 SNORA18.1-201ENST00000363418 128 ntBASIC-0.37□□□□□ -2.47
CLOCKO15516 SNORA63.5-201ENST00000363548 123 ntBASIC-0.37□□□□□ -2.47
CLOCKO15516 MIR1265-201ENST00000408444 86 ntBASIC-0.37□□□□□ -2.47
CLOCKO15516 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.37□□□□□ -2.47
CLOCKO15516 MIR5197-201ENST00000583721 112 ntBASIC-0.37□□□□□ -2.47
CLOCKO15516 MIR3925-201ENST00000584674 77 ntBASIC-0.37□□□□□ -2.47
CLOCKO15516 SNORA22.1-201ENST00000362701 134 ntBASIC-0.38□□□□□ -2.47
CLOCKO15516 RNY1P13-201ENST00000365030 105 ntBASIC-0.38□□□□□ -2.47
CLOCKO15516 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.38□□□□□ -2.47
CLOCKO15516 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.38□□□□□ -2.47
CLOCKO15516 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.38□□□□□ -2.47
CLOCKO15516 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.38□□□□□ -2.47
CLOCKO15516 MIR5706-201ENST00000579841 80 ntBASIC-0.38□□□□□ -2.47
CLOCKO15516 MIR4677-201ENST00000584153 80 ntBASIC-0.38□□□□□ -2.47
CLOCKO15516 AL670379.3-201ENST00000605040 251 ntBASIC-0.38□□□□□ -2.47
CLOCKO15516 AC139792.2-201ENST00000624218 587 ntBASIC-0.38□□□□□ -2.47
CLOCKO15516 MIR6086-201ENST00000638065 55 ntBASIC-0.38□□□□□ -2.47
CLOCKO15516 RNA5SP98-201ENST00000363158 137 ntBASIC-0.39□□□□□ -2.47
CLOCKO15516 SNORD114-12-201ENST00000365400 75 ntBASIC-0.39□□□□□ -2.47
CLOCKO15516 RNU6-46P-201ENST00000383860 107 ntBASIC-0.39□□□□□ -2.47
CLOCKO15516 SNORA18-201ENST00000384416 132 ntBASIC-0.39□□□□□ -2.47
CLOCKO15516 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.39□□□□□ -2.47
CLOCKO15516 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.39□□□□□ -2.47
CLOCKO15516 MIR4645-201ENST00000583158 77 ntBASIC-0.39□□□□□ -2.47
CLOCKO15516 AL442067.1-201ENST00000613261 223 ntBASIC-0.39□□□□□ -2.47
CLOCKO15516 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.39□□□□□ -2.47
CLOCKO15516 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.4□□□□□ -2.47
CLOCKO15516 RNU4-73P-201ENST00000363164 141 ntBASIC-0.4□□□□□ -2.47
CLOCKO15516 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.4□□□□□ -2.47
CLOCKO15516 SNORD115-24-201ENST00000363528 82 ntBASIC-0.4□□□□□ -2.47
CLOCKO15516 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.4□□□□□ -2.47
CLOCKO15516 Y_RNA.390-201ENST00000383932 102 ntBASIC-0.4□□□□□ -2.47
CLOCKO15516 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.4□□□□□ -2.47
CLOCKO15516 RNU6-121P-201ENST00000410525 99 ntBASIC-0.4□□□□□ -2.47
CLOCKO15516 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.4□□□□□ -2.47
CLOCKO15516 RNU6-531P-201ENST00000516694 104 ntBASIC-0.4□□□□□ -2.47
CLOCKO15516 MIR3129-201ENST00000581095 76 ntBASIC-0.4□□□□□ -2.47
CLOCKO15516 MIR4493-201ENST00000584016 73 ntBASIC-0.4□□□□□ -2.47
CLOCKO15516 uc_338.28-201ENST00000612082 187 ntBASIC-0.4□□□□□ -2.47
CLOCKO15516 AC021613.1-201ENST00000623880 111 ntBASIC-0.4□□□□□ -2.47
CLOCKO15516 UBE2WP1-201ENST00000362030 340 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 SNORD114-28-201ENST00000363610 72 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 RNA5SP275-201ENST00000363936 118 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 RNU6-702P-201ENST00000364982 107 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 SNORA22B-201ENST00000383876 138 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 RNU6-211P-201ENST00000384047 107 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 MIR106A-201ENST00000384870 81 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 MT-TT-201ENST00000387460 66 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
CLOCKO15516 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 MIR1252-201ENST00000408861 65 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 AC096531.1-201ENST00000419107 107 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 HMGN2P22-201ENST00000427588 175 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 RBMX2P4-201ENST00000441256 376 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 AC244505.6-201ENST00000452829 130 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.41□□□□□ -2.48
CLOCKO15516 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 RNU7-161P-201ENST00000517289 62 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 RNU2-60P-201ENST00000517290 128 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 AC011921.3-201ENST00000605540 361 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 U7.6-201ENST00000610841 64 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 MIR6514-201ENST00000622549 70 ntBASIC-0.41□□□□□ -2.48
CLOCKO15516 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.42□□□□□ -2.48
CLOCKO15516 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.42□□□□□ -2.48
CLOCKO15516 RNU6-823P-201ENST00000391042 103 ntBASIC-0.42□□□□□ -2.48
CLOCKO15516 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.42□□□□□ -2.48
CLOCKO15516 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.42□□□□□ -2.48
CLOCKO15516 MTND4P19-201ENST00000446659 478 ntBASIC-0.42□□□□□ -2.48
CLOCKO15516 RNA5SP476-201ENST00000516613 103 ntBASIC-0.42□□□□□ -2.48
CLOCKO15516 DEFB131E-201ENST00000532329 154 ntBASIC-0.42□□□□□ -2.48
CLOCKO15516 AC138749.4-201ENST00000563970 127 ntBASIC-0.42□□□□□ -2.48
CLOCKO15516 MIR378D2-201ENST00000580636 98 ntBASIC-0.42□□□□□ -2.48
CLOCKO15516 AL360085.1-201ENST00000604713 532 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms