Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RNA5SP94-201ENST00000516917 108 ntBASIC0.19□□□□□ -2.38
CUX2O14529 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.19□□□□□ -2.38
CUX2O14529 MIR30D-201ENST00000362283 70 ntBASIC0.18□□□□□ -2.38
CUX2O14529 RNU6-349P-201ENST00000362402 107 ntBASIC0.18□□□□□ -2.38
CUX2O14529 Y_RNA.26-201ENST00000362539 101 ntBASIC0.18□□□□□ -2.38
CUX2O14529 MIR563-201ENST00000385080 79 ntBASIC0.18□□□□□ -2.38
CUX2O14529 AC108740.1-201ENST00000498629 225 ntBASIC0.18□□□□□ -2.38
CUX2O14529 RNU6-469P-201ENST00000516253 101 ntBASIC0.18□□□□□ -2.38
CUX2O14529 RNY1P9-201ENST00000532431 109 ntBASIC0.18□□□□□ -2.38
CUX2O14529 Y_RNA.276-201ENST00000364732 109 ntBASIC0.17□□□□□ -2.38
CUX2O14529 RNU6-740P-201ENST00000364734 105 ntBASIC0.17□□□□□ -2.38
CUX2O14529 Y_RNA.304-201ENST00000365011 112 ntBASIC0.17□□□□□ -2.38
CUX2O14529 RNU6-1228P-201ENST00000391014 107 ntBASIC0.17□□□□□ -2.38
CUX2O14529 AL606845.1-201ENST00000404881 255 ntBASIC0.17□□□□□ -2.38
CUX2O14529 SNORA79-201ENST00000408376 140 ntBASIC0.17□□□□□ -2.38
CUX2O14529 RNU4-83P-201ENST00000410863 133 ntBASIC0.17□□□□□ -2.38
CUX2O14529 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.17□□□□□ -2.38
CUX2O14529 AP001282.2-201ENST00000616149 309 ntBASIC0.17□□□□□ -2.38
CUX2O14529 MTND4P29-201ENST00000503122 1372 ntBASIC0.17□□□□□ -2.38
CUX2O14529 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
CUX2O14529 Y_RNA.91-201ENST00000363042 107 ntBASIC0.16□□□□□ -2.38
CUX2O14529 Y_RNA.454-201ENST00000384224 113 ntBASIC0.16□□□□□ -2.38
CUX2O14529 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.16□□□□□ -2.38
CUX2O14529 RNU6-1190P-201ENST00000410811 104 ntBASIC0.16□□□□□ -2.38
CUX2O14529 RNU6-863P-201ENST00000515989 104 ntBASIC0.16□□□□□ -2.38
CUX2O14529 AC113195.1-201ENST00000579952 141 ntBASIC0.16□□□□□ -2.38
CUX2O14529 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.16□□□□□ -2.38
CUX2O14529 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.16□□□□□ -2.38
CUX2O14529 MIR371B-201ENST00000638082 66 ntBASIC0.16□□□□□ -2.38
CUX2O14529 RNU6-403P-201ENST00000363163 104 ntBASIC0.16□□□□□ -2.38
CUX2O14529 RNU6-1099P-201ENST00000363533 107 ntBASIC0.16□□□□□ -2.38
CUX2O14529 Y_RNA.202-201ENST00000364083 110 ntBASIC0.16□□□□□ -2.38
CUX2O14529 SNORA1-201ENST00000384107 130 ntBASIC0.16□□□□□ -2.38
CUX2O14529 RNU7-45P-201ENST00000459460 63 ntBASIC0.16□□□□□ -2.38
CUX2O14529 RNU7-70P-201ENST00000516941 66 ntBASIC0.16□□□□□ -2.38
CUX2O14529 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.16□□□□□ -2.38
CUX2O14529 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.16□□□□□ -2.38
CUX2O14529 Y_RNA.117-201ENST00000363294 101 ntBASIC0.15□□□□□ -2.39
CUX2O14529 Y_RNA.567-201ENST00000384736 106 ntBASIC0.15□□□□□ -2.39
CUX2O14529 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
CUX2O14529 RNU2-59P-201ENST00000410482 191 ntBASIC0.15□□□□□ -2.39
CUX2O14529 HMGN2P22-201ENST00000427588 175 ntBASIC0.15□□□□□ -2.39
CUX2O14529 MTATP6P23-201ENST00000440153 476 ntBASIC0.15□□□□□ -2.39
CUX2O14529 SNORA25.18-201ENST00000607153 114 ntBASIC0.15□□□□□ -2.39
CUX2O14529 Y_RNA.44-201ENST00000362676 108 ntBASIC0.14□□□□□ -2.39
CUX2O14529 Y_RNA.275-201ENST00000364726 110 ntBASIC0.14□□□□□ -2.39
CUX2O14529 RNU6-484P-201ENST00000384016 107 ntBASIC0.14□□□□□ -2.39
CUX2O14529 SNORA8.2-201ENST00000384372 139 ntBASIC0.14□□□□□ -2.39
CUX2O14529 Y_RNA.509-201ENST00000384506 99 ntBASIC0.14□□□□□ -2.39
CUX2O14529 MIR644A-201ENST00000385262 94 ntBASIC0.14□□□□□ -2.39
CUX2O14529 MTND4LP11-201ENST00000422184 280 ntBASIC0.14□□□□□ -2.39
CUX2O14529 RNU6-453P-201ENST00000516819 85 ntBASIC0.14□□□□□ -2.39
CUX2O14529 RNU6-570P-201ENST00000517051 105 ntBASIC0.14□□□□□ -2.39
CUX2O14529 MIR3171-201ENST00000584270 74 ntBASIC0.14□□□□□ -2.39
CUX2O14529 MIR4315-1-201ENST00000636800 73 ntBASIC0.14□□□□□ -2.39
CUX2O14529 MIR4315-2-201ENST00000640925 73 ntBASIC0.14□□□□□ -2.39
CUX2O14529 AL596211.1-201ENST00000569873 2277 ntBASIC0.13□□□□□ -2.39
CUX2O14529 SNORA26.6-201ENST00000391256 115 ntBASIC0.13□□□□□ -2.39
CUX2O14529 MIR548P-201ENST00000408336 84 ntBASIC0.13□□□□□ -2.39
CUX2O14529 RNU6-1203P-201ENST00000410703 110 ntBASIC0.13□□□□□ -2.39
CUX2O14529 AC073261.1-201ENST00000429409 121 ntBASIC0.13□□□□□ -2.39
CUX2O14529 Y_RNA.679-201ENST00000516416 91 ntBASIC0.13□□□□□ -2.39
CUX2O14529 MIR3129-201ENST00000581095 76 ntBASIC0.13□□□□□ -2.39
CUX2O14529 MIR411-201ENST00000362239 96 ntBASIC0.12□□□□□ -2.39
CUX2O14529 SNORD49B-201ENST00000365172 72 ntBASIC0.12□□□□□ -2.39
CUX2O14529 RNU6-728P-201ENST00000365375 104 ntBASIC0.12□□□□□ -2.39
CUX2O14529 SNORA20-201ENST00000384662 132 ntBASIC0.12□□□□□ -2.39
CUX2O14529 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.12□□□□□ -2.39
CUX2O14529 MTND5P22-201ENST00000458380 195 ntBASIC0.12□□□□□ -2.39
CUX2O14529 AL117351.2-201ENST00000513571 157 ntBASIC0.12□□□□□ -2.39
CUX2O14529 Y_RNA.711-201ENST00000516993 102 ntBASIC0.12□□□□□ -2.39
CUX2O14529 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
CUX2O14529 RNU6-653P-201ENST00000363074 106 ntBASIC0.11□□□□□ -2.39
CUX2O14529 MIR616-201ENST00000385293 97 ntBASIC0.11□□□□□ -2.39
CUX2O14529 AL512326.2-201ENST00000426359 151 ntBASIC0.11□□□□□ -2.39
CUX2O14529 AC141557.1-201ENST00000540982 400 ntBASIC0.11□□□□□ -2.39
CUX2O14529 AC133485.4-201ENST00000561835 220 ntBASIC0.11□□□□□ -2.39
CUX2O14529 AC078938.1-201ENST00000620993 318 ntBASIC0.11□□□□□ -2.39
CUX2O14529 RNU5E-4P-201ENST00000364931 120 ntBASIC0.1□□□□□ -2.39
CUX2O14529 RNU6-815P-201ENST00000384080 113 ntBASIC0.1□□□□□ -2.39
CUX2O14529 Y_RNA.430-201ENST00000384081 110 ntBASIC0.1□□□□□ -2.39
CUX2O14529 AC069113.3-201ENST00000521019 150 ntBASIC0.1□□□□□ -2.39
CUX2O14529 MIR4680-201ENST00000580906 66 ntBASIC0.1□□□□□ -2.39
CUX2O14529 MIR4491-201ENST00000581087 68 ntBASIC0.1□□□□□ -2.39
CUX2O14529 AL662814.1-201ENST00000617364 121 ntBASIC0.1□□□□□ -2.39
CUX2O14529 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.1□□□□□ -2.39
CUX2O14529 Y_RNA.23-201ENST00000362496 106 ntBASIC0.1□□□□□ -2.39
CUX2O14529 Y_RNA.542-201ENST00000384641 111 ntBASIC0.1□□□□□ -2.39
CUX2O14529 U8.15-201ENST00000390947 134 ntBASIC0.1□□□□□ -2.39
CUX2O14529 Y_RNA.590-201ENST00000410140 107 ntBASIC0.1□□□□□ -2.39
CUX2O14529 RNU6-985P-201ENST00000410182 104 ntBASIC0.1□□□□□ -2.39
CUX2O14529 Y_RNA.617-201ENST00000410920 90 ntBASIC0.1□□□□□ -2.39
CUX2O14529 AC112693.2-201ENST00000556538 232 ntBASIC0.1□□□□□ -2.39
CUX2O14529 Y_RNA.13-201ENST00000362403 112 ntBASIC0.09□□□□□ -2.4
CUX2O14529 Y_RNA.138-201ENST00000363462 102 ntBASIC0.09□□□□□ -2.4
CUX2O14529 snoU2_19.4-201ENST00000364329 80 ntBASIC0.09□□□□□ -2.4
CUX2O14529 RNU6-867P-201ENST00000364956 107 ntBASIC0.09□□□□□ -2.4
CUX2O14529 Y_RNA.416-201ENST00000384014 113 ntBASIC0.09□□□□□ -2.4
CUX2O14529 MIR214-201ENST00000385214 110 ntBASIC0.09□□□□□ -2.4
CUX2O14529 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms