Protein–RNA interactions for Protein: O00592

PODXL, Podocalyxin, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PODXLO00592 MTND5P18-201ENST00000445624 1801 ntBASIC1.42□□□□□ -2.18
PODXLO00592 SNORA51.10-201ENST00000384418 136 ntBASIC1.41□□□□□ -2.18
PODXLO00592 RNU6-429P-201ENST00000384582 108 ntBASIC1.41□□□□□ -2.18
PODXLO00592 SNORA40.6-201ENST00000391153 128 ntBASIC1.41□□□□□ -2.18
PODXLO00592 RNA5SP136-201ENST00000410906 107 ntBASIC1.41□□□□□ -2.18
PODXLO00592 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.41□□□□□ -2.18
PODXLO00592 MIR3660-201ENST00000584845 100 ntBASIC1.41□□□□□ -2.18
PODXLO00592 AL670379.3-201ENST00000605040 251 ntBASIC1.41□□□□□ -2.18
PODXLO00592 MIR4791-201ENST00000607666 84 ntBASIC1.41□□□□□ -2.18
PODXLO00592 MIR6129-201ENST00000616087 109 ntBASIC1.41□□□□□ -2.18
PODXLO00592 AL161722.3-201ENST00000605789 2983 ntBASIC1.4□□□□□ -2.19
PODXLO00592 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
PODXLO00592 SNORA24-201ENST00000384096 131 ntBASIC1.4□□□□□ -2.19
PODXLO00592 MIR548A3-201ENST00000385297 97 ntBASIC1.4□□□□□ -2.19
PODXLO00592 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
PODXLO00592 RNY4P20-201ENST00000516678 93 ntBASIC1.4□□□□□ -2.19
PODXLO00592 AC243994.1-201ENST00000618627 109 ntBASIC1.4□□□□□ -2.19
PODXLO00592 Y_RNA.298-201ENST00000364960 107 ntBASIC1.39□□□□□ -2.19
PODXLO00592 Y_RNA.649-201ENST00000459077 103 ntBASIC1.39□□□□□ -2.19
PODXLO00592 RNU7-164P-201ENST00000459221 62 ntBASIC1.39□□□□□ -2.19
PODXLO00592 RNU7-45P-201ENST00000459460 63 ntBASIC1.39□□□□□ -2.19
PODXLO00592 RNU7-53P-201ENST00000516705 60 ntBASIC1.39□□□□□ -2.19
PODXLO00592 RNU6-919P-201ENST00000516731 104 ntBASIC1.39□□□□□ -2.19
PODXLO00592 AP003716.2-201ENST00000528260 108 ntBASIC1.39□□□□□ -2.19
PODXLO00592 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
PODXLO00592 MIR4305-201ENST00000583252 102 ntBASIC1.39□□□□□ -2.19
PODXLO00592 AC021613.1-201ENST00000623880 111 ntBASIC1.39□□□□□ -2.19
PODXLO00592 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
PODXLO00592 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.38□□□□□ -2.19
PODXLO00592 Y_RNA.81-201ENST00000362997 102 ntBASIC1.38□□□□□ -2.19
PODXLO00592 RNA5SP264-201ENST00000363115 107 ntBASIC1.38□□□□□ -2.19
PODXLO00592 MIR548A1-201ENST00000385041 97 ntBASIC1.38□□□□□ -2.19
PODXLO00592 RNU6-910P-201ENST00000390844 107 ntBASIC1.38□□□□□ -2.19
PODXLO00592 AL035461.1-201ENST00000421490 332 ntBASIC1.38□□□□□ -2.19
PODXLO00592 COX6CP6-201ENST00000490840 228 ntBASIC1.38□□□□□ -2.19
PODXLO00592 RNU7-123P-201ENST00000515911 60 ntBASIC1.38□□□□□ -2.19
PODXLO00592 RNU2-35P-201ENST00000516446 142 ntBASIC1.38□□□□□ -2.19
PODXLO00592 PRELID3BP2-201ENST00000605362 201 ntBASIC1.38□□□□□ -2.19
PODXLO00592 MIR6078-201ENST00000611069 100 ntBASIC1.38□□□□□ -2.19
PODXLO00592 MIR103A2-201ENST00000362154 78 ntBASIC1.37□□□□□ -2.19
PODXLO00592 SNORA25.3-201ENST00000363205 127 ntBASIC1.37□□□□□ -2.19
PODXLO00592 SNORD116-21-201ENST00000384507 92 ntBASIC1.37□□□□□ -2.19
PODXLO00592 RNU6-913P-201ENST00000390913 95 ntBASIC1.37□□□□□ -2.19
PODXLO00592 RNA5SP144-201ENST00000410846 116 ntBASIC1.37□□□□□ -2.19
PODXLO00592 MTATP6P29-201ENST00000415057 132 ntBASIC1.37□□□□□ -2.19
PODXLO00592 RNU7-73P-201ENST00000458743 63 ntBASIC1.37□□□□□ -2.19
PODXLO00592 SNORA70.22-201ENST00000517160 124 ntBASIC1.37□□□□□ -2.19
PODXLO00592 MIR8070-201ENST00000616510 88 ntBASIC1.37□□□□□ -2.19
PODXLO00592 AL391516.1-201ENST00000554380 2449 ntBASIC1.37□□□□□ -2.19
PODXLO00592 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
PODXLO00592 Y_RNA.198-201ENST00000364013 98 ntBASIC1.36□□□□□ -2.19
PODXLO00592 RNU6-53P-201ENST00000365367 106 ntBASIC1.36□□□□□ -2.19
PODXLO00592 Y_RNA.363-201ENST00000365529 113 ntBASIC1.36□□□□□ -2.19
PODXLO00592 RNU6-44P-201ENST00000384045 107 ntBASIC1.36□□□□□ -2.19
PODXLO00592 SNORA25-201ENST00000384384 134 ntBASIC1.36□□□□□ -2.19
PODXLO00592 RNU6-1319P-201ENST00000390855 104 ntBASIC1.36□□□□□ -2.19
PODXLO00592 RNU6-747P-201ENST00000390928 104 ntBASIC1.36□□□□□ -2.19
PODXLO00592 RNU6-241P-201ENST00000391148 104 ntBASIC1.36□□□□□ -2.19
PODXLO00592 RNU6-1190P-201ENST00000410811 104 ntBASIC1.36□□□□□ -2.19
PODXLO00592 RNU6-177P-201ENST00000411257 104 ntBASIC1.36□□□□□ -2.19
PODXLO00592 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.36□□□□□ -2.19
PODXLO00592 AC019288.1-201ENST00000557918 224 ntBASIC1.36□□□□□ -2.19
PODXLO00592 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.36□□□□□ -2.19
PODXLO00592 Y_RNA.35-201ENST00000362601 101 ntBASIC1.35□□□□□ -2.19
PODXLO00592 RNU6-1104P-201ENST00000384723 104 ntBASIC1.35□□□□□ -2.19
PODXLO00592 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
PODXLO00592 SNORD12-201ENST00000391002 90 ntBASIC1.35□□□□□ -2.19
PODXLO00592 SNORA26.6-201ENST00000391256 115 ntBASIC1.35□□□□□ -2.19
PODXLO00592 MIR1185-1-201ENST00000408598 86 ntBASIC1.35□□□□□ -2.19
PODXLO00592 AL022718.1-201ENST00000412004 84 ntBASIC1.35□□□□□ -2.19
PODXLO00592 snoU13.16-201ENST00000459350 104 ntBASIC1.35□□□□□ -2.19
PODXLO00592 SNORD79.1-201ENST00000516069 84 ntBASIC1.35□□□□□ -2.19
PODXLO00592 RNU6-589P-201ENST00000516485 107 ntBASIC1.35□□□□□ -2.19
PODXLO00592 Y_RNA.709-201ENST00000516952 92 ntBASIC1.35□□□□□ -2.19
PODXLO00592 AC022523.2-201ENST00000561045 150 ntBASIC1.35□□□□□ -2.19
PODXLO00592 MIR3152-201ENST00000579801 74 ntBASIC1.35□□□□□ -2.19
PODXLO00592 AL020996.3-201ENST00000606617 222 ntBASIC1.35□□□□□ -2.19
PODXLO00592 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.35□□□□□ -2.19
PODXLO00592 Y_RNA.213-201ENST00000364178 111 ntBASIC1.34□□□□□ -2.19
PODXLO00592 SNORA80D-201ENST00000384488 135 ntBASIC1.34□□□□□ -2.19
PODXLO00592 RNU6-880P-201ENST00000384526 107 ntBASIC1.34□□□□□ -2.19
PODXLO00592 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
PODXLO00592 MT-TI-201ENST00000387365 69 ntBASIC1.34□□□□□ -2.19
PODXLO00592 RNY4P18-201ENST00000391107 89 ntBASIC1.34□□□□□ -2.19
PODXLO00592 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.34□□□□□ -2.19
PODXLO00592 RNA5SP261-201ENST00000410536 106 ntBASIC1.34□□□□□ -2.19
PODXLO00592 POLR2J4-204ENST00000418424 324 ntBASIC1.34□□□□□ -2.19
PODXLO00592 AL512326.2-201ENST00000426359 151 ntBASIC1.34□□□□□ -2.19
PODXLO00592 HMGN1P33-201ENST00000432945 451 ntBASIC1.34□□□□□ -2.19
PODXLO00592 MIR548AO-201ENST00000579992 96 ntBASIC1.34□□□□□ -2.19
PODXLO00592 MIR6717-201ENST00000622747 73 ntBASIC1.34□□□□□ -2.19
PODXLO00592 AC027335.2-201ENST00000624030 375 ntBASIC1.34□□□□□ -2.19
PODXLO00592 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.34□□□□□ -2.19
PODXLO00592 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
PODXLO00592 SNORA22.1-201ENST00000362701 134 ntBASIC1.33□□□□□ -2.2
PODXLO00592 MIR222-201ENST00000384992 110 ntBASIC1.33□□□□□ -2.2
PODXLO00592 MIR759-201ENST00000390224 91 ntBASIC1.33□□□□□ -2.2
PODXLO00592 SNORA75.2-201ENST00000391138 150 ntBASIC1.33□□□□□ -2.2
PODXLO00592 SNORA75.3-201ENST00000391231 150 ntBASIC1.33□□□□□ -2.2
PODXLO00592 MIR1302-7-201ENST00000408841 72 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms