Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RNU7-70P-201ENST00000516941 66 ntBASIC0.26□□□□□ -2.37
SLC28A1O00337 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SLC28A1O00337 AL117187.1-201ENST00000555482 181 ntBASIC0.26□□□□□ -2.37
SLC28A1O00337 SNORA36.1-201ENST00000363424 132 ntBASIC0.25□□□□□ -2.37
SLC28A1O00337 Y_RNA.226-201ENST00000364337 114 ntBASIC0.25□□□□□ -2.37
SLC28A1O00337 Y_RNA.352-201ENST00000365439 102 ntBASIC0.25□□□□□ -2.37
SLC28A1O00337 Y_RNA.567-201ENST00000384736 106 ntBASIC0.25□□□□□ -2.37
SLC28A1O00337 Y_RNA.588-201ENST00000391254 102 ntBASIC0.25□□□□□ -2.37
SLC28A1O00337 RNU6-1132P-201ENST00000459214 107 ntBASIC0.25□□□□□ -2.37
SLC28A1O00337 MTND1P19-201ENST00000511780 315 ntBASIC0.25□□□□□ -2.37
SLC28A1O00337 RNU6-1258P-201ENST00000516911 111 ntBASIC0.25□□□□□ -2.37
SLC28A1O00337 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.25□□□□□ -2.37
SLC28A1O00337 AP003327.1-201ENST00000529684 127 ntBASIC0.25□□□□□ -2.37
SLC28A1O00337 AC133485.4-201ENST00000561835 220 ntBASIC0.25□□□□□ -2.37
SLC28A1O00337 AC008737.2-201ENST00000599446 118 ntBASIC0.25□□□□□ -2.37
SLC28A1O00337 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.25□□□□□ -2.37
SLC28A1O00337 Y_RNA.11-201ENST00000362375 109 ntBASIC0.24□□□□□ -2.37
SLC28A1O00337 Y_RNA.47-201ENST00000362697 108 ntBASIC0.24□□□□□ -2.37
SLC28A1O00337 SNORD44.1-201ENST00000363202 61 ntBASIC0.24□□□□□ -2.37
SLC28A1O00337 Y_RNA.238-201ENST00000364441 102 ntBASIC0.24□□□□□ -2.37
SLC28A1O00337 RNU4-16P-201ENST00000364737 141 ntBASIC0.24□□□□□ -2.37
SLC28A1O00337 Y_RNA.308-201ENST00000365043 101 ntBASIC0.24□□□□□ -2.37
SLC28A1O00337 RNU6-1336P-201ENST00000383886 109 ntBASIC0.24□□□□□ -2.37
SLC28A1O00337 SNORA8.2-201ENST00000384372 139 ntBASIC0.24□□□□□ -2.37
SLC28A1O00337 MIR644A-201ENST00000385262 94 ntBASIC0.24□□□□□ -2.37
SLC28A1O00337 RNU6-493P-201ENST00000391321 108 ntBASIC0.24□□□□□ -2.37
SLC28A1O00337 SNORD127-201ENST00000458892 86 ntBASIC0.24□□□□□ -2.37
SLC28A1O00337 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
SLC28A1O00337 AC006504.6-201ENST00000590142 199 ntBASIC0.24□□□□□ -2.37
SLC28A1O00337 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.24□□□□□ -2.37
SLC28A1O00337 Y_RNA.13-201ENST00000362403 112 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 Y_RNA.116-201ENST00000363292 103 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 SNORD118-201ENST00000363593 134 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 RNU6-738P-201ENST00000384531 106 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 Y_RNA.539-201ENST00000384635 107 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 MIR568-201ENST00000385036 95 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 AL358176.2-201ENST00000425769 204 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 SNRPGP12-201ENST00000449481 213 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 AL121914.1-201ENST00000450188 156 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 SNORD116-25-201ENST00000516517 92 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 AC141846.1-201ENST00000568348 142 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 MIR4308-201ENST00000580634 81 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 MIR4744-201ENST00000581563 82 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 RNU2-4P-201ENST00000606190 192 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 AC021613.1-201ENST00000623880 111 ntBASIC0.23□□□□□ -2.37
SLC28A1O00337 Y_RNA.32-201ENST00000362589 110 ntBASIC0.22□□□□□ -2.37
SLC28A1O00337 SNORA22.1-201ENST00000362701 134 ntBASIC0.22□□□□□ -2.37
SLC28A1O00337 RNU6-403P-201ENST00000363163 104 ntBASIC0.22□□□□□ -2.37
SLC28A1O00337 RNU6-923P-201ENST00000364753 107 ntBASIC0.22□□□□□ -2.37
SLC28A1O00337 RNY4P28-201ENST00000365281 93 ntBASIC0.22□□□□□ -2.37
SLC28A1O00337 Y_RNA.562-201ENST00000384695 113 ntBASIC0.22□□□□□ -2.37
SLC28A1O00337 RNU6-578P-201ENST00000390980 103 ntBASIC0.22□□□□□ -2.37
SLC28A1O00337 MTND2P23-201ENST00000422990 651 ntBASIC0.22□□□□□ -2.37
SLC28A1O00337 AL589743.1-201ENST00000551932 2712 ntBASIC0.22□□□□□ -2.37
SLC28A1O00337 MTND5P32-201ENST00000560711 1802 ntBASIC0.22□□□□□ -2.37
SLC28A1O00337 RNA5SP62-201ENST00000363457 110 ntBASIC0.21□□□□□ -2.38
SLC28A1O00337 Y_RNA.145-201ENST00000363527 102 ntBASIC0.21□□□□□ -2.38
SLC28A1O00337 Y_RNA.269-201ENST00000364685 89 ntBASIC0.21□□□□□ -2.38
SLC28A1O00337 MIR518E-201ENST00000385252 88 ntBASIC0.21□□□□□ -2.38
SLC28A1O00337 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.21□□□□□ -2.38
SLC28A1O00337 Y_RNA.680-201ENST00000516441 93 ntBASIC0.21□□□□□ -2.38
SLC28A1O00337 RNU6-1149P-201ENST00000516810 97 ntBASIC0.21□□□□□ -2.38
SLC28A1O00337 MIR378D2-201ENST00000580636 98 ntBASIC0.21□□□□□ -2.38
SLC28A1O00337 MIR4491-201ENST00000581087 68 ntBASIC0.21□□□□□ -2.38
SLC28A1O00337 AC078938.1-201ENST00000620993 318 ntBASIC0.21□□□□□ -2.38
SLC28A1O00337 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
SLC28A1O00337 SNORD27-201ENST00000363981 72 ntBASIC0.2□□□□□ -2.38
SLC28A1O00337 RNY1P13-201ENST00000365030 105 ntBASIC0.2□□□□□ -2.38
SLC28A1O00337 Y_RNA.477-201ENST00000384352 108 ntBASIC0.2□□□□□ -2.38
SLC28A1O00337 SNORA18-201ENST00000384416 132 ntBASIC0.2□□□□□ -2.38
SLC28A1O00337 RNA5SP193-201ENST00000410353 107 ntBASIC0.2□□□□□ -2.38
SLC28A1O00337 RNU6-863P-201ENST00000515989 104 ntBASIC0.2□□□□□ -2.38
SLC28A1O00337 MIR4431-201ENST00000579990 94 ntBASIC0.2□□□□□ -2.38
SLC28A1O00337 Y_RNA.812-201ENST00000610788 101 ntBASIC0.2□□□□□ -2.38
SLC28A1O00337 MIR6082-201ENST00000613604 109 ntBASIC0.2□□□□□ -2.38
SLC28A1O00337 Y_RNA.784-201ENST00000613803 101 ntBASIC0.2□□□□□ -2.38
SLC28A1O00337 AC022709.1-201ENST00000615967 87 ntBASIC0.2□□□□□ -2.38
SLC28A1O00337 Y_RNA.787-201ENST00000616522 101 ntBASIC0.2□□□□□ -2.38
SLC28A1O00337 Y_RNA.780-201ENST00000617336 101 ntBASIC0.2□□□□□ -2.38
SLC28A1O00337 Y_RNA.801-201ENST00000619005 101 ntBASIC0.2□□□□□ -2.38
SLC28A1O00337 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
SLC28A1O00337 RNU6-349P-201ENST00000362402 107 ntBASIC0.19□□□□□ -2.38
SLC28A1O00337 Y_RNA.171-201ENST00000363760 102 ntBASIC0.19□□□□□ -2.38
SLC28A1O00337 RNA5SP127-201ENST00000411051 133 ntBASIC0.19□□□□□ -2.38
SLC28A1O00337 AL512326.2-201ENST00000426359 151 ntBASIC0.19□□□□□ -2.38
SLC28A1O00337 SNORA31.14-201ENST00000516728 116 ntBASIC0.19□□□□□ -2.38
SLC28A1O00337 SNORA25.16-201ENST00000516741 121 ntBASIC0.19□□□□□ -2.38
SLC28A1O00337 RNU6-765P-201ENST00000516916 99 ntBASIC0.19□□□□□ -2.38
SLC28A1O00337 MRPS18CP4-201ENST00000535821 231 ntBASIC0.19□□□□□ -2.38
SLC28A1O00337 MTND5P34-201ENST00000568888 325 ntBASIC0.19□□□□□ -2.38
SLC28A1O00337 Y_RNA.757-201ENST00000578934 114 ntBASIC0.19□□□□□ -2.38
SLC28A1O00337 AL360085.1-201ENST00000604713 532 ntBASIC0.19□□□□□ -2.38
SLC28A1O00337 Y_RNA.174-201ENST00000363781 105 ntBASIC0.18□□□□□ -2.38
SLC28A1O00337 RNU6-643P-201ENST00000384018 107 ntBASIC0.18□□□□□ -2.38
SLC28A1O00337 RNU6-949P-201ENST00000384040 107 ntBASIC0.18□□□□□ -2.38
SLC28A1O00337 Y_RNA.459-201ENST00000384251 102 ntBASIC0.18□□□□□ -2.38
SLC28A1O00337 SNORA72.6-201ENST00000384520 129 ntBASIC0.18□□□□□ -2.38
SLC28A1O00337 Y_RNA.515-201ENST00000384535 112 ntBASIC0.18□□□□□ -2.38
SLC28A1O00337 MIR624-201ENST00000385217 97 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms