Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AC243994.1-201ENST00000618627 109 ntBASIC2.2□□□□□ -2.06
RFXAPO00287 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RFXAPO00287 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
RFXAPO00287 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RFXAPO00287 Y_RNA.96-201ENST00000363092 109 ntBASIC2.19□□□□□ -2.06
RFXAPO00287 RNU6-1244P-201ENST00000363614 108 ntBASIC2.19□□□□□ -2.06
RFXAPO00287 RNU6-1031P-201ENST00000384773 107 ntBASIC2.19□□□□□ -2.06
RFXAPO00287 AL034345.1-201ENST00000407768 123 ntBASIC2.19□□□□□ -2.06
RFXAPO00287 AL445685.2-201ENST00000422551 342 ntBASIC2.19□□□□□ -2.06
RFXAPO00287 TRMT112P2-201ENST00000512910 132 ntBASIC2.19□□□□□ -2.06
RFXAPO00287 RNU7-53P-201ENST00000516705 60 ntBASIC2.19□□□□□ -2.06
RFXAPO00287 AC096720.1-201ENST00000604441 183 ntBASIC2.19□□□□□ -2.06
RFXAPO00287 AC105081.1-201ENST00000617727 106 ntBASIC2.19□□□□□ -2.06
RFXAPO00287 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
RFXAPO00287 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RFXAPO00287 RNU6-776P-201ENST00000364403 104 ntBASIC2.18□□□□□ -2.06
RFXAPO00287 RNU6-1022P-201ENST00000365049 104 ntBASIC2.18□□□□□ -2.06
RFXAPO00287 MIR1283-2-201ENST00000408621 87 ntBASIC2.18□□□□□ -2.06
RFXAPO00287 RNU4-62P-201ENST00000410125 130 ntBASIC2.18□□□□□ -2.06
RFXAPO00287 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC2.18□□□□□ -2.06
RFXAPO00287 AC003989.2-201ENST00000440224 169 ntBASIC2.18□□□□□ -2.06
RFXAPO00287 RNU7-73P-201ENST00000458743 63 ntBASIC2.18□□□□□ -2.06
RFXAPO00287 AC099513.1-201ENST00000490423 301 ntBASIC2.18□□□□□ -2.06
RFXAPO00287 SNORD67.1-201ENST00000516618 108 ntBASIC2.18□□□□□ -2.06
RFXAPO00287 RNA5SP82-201ENST00000516707 92 ntBASIC2.18□□□□□ -2.06
RFXAPO00287 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.18□□□□□ -2.06
RFXAPO00287 DNAJC19P9-201ENST00000555084 351 ntBASIC2.18□□□□□ -2.06
RFXAPO00287 MIR3152-201ENST00000579801 74 ntBASIC2.18□□□□□ -2.06
RFXAPO00287 MIR5194-201ENST00000582634 120 ntBASIC2.18□□□□□ -2.06
RFXAPO00287 AC021506.2-201ENST00000612354 169 ntBASIC2.18□□□□□ -2.06
RFXAPO00287 U4atac.1-201ENST00000618345 95 ntBASIC2.18□□□□□ -2.06
RFXAPO00287 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
RFXAPO00287 RNU6-633P-201ENST00000362612 103 ntBASIC2.17□□□□□ -2.06
RFXAPO00287 SNORA25.9-201ENST00000365087 128 ntBASIC2.17□□□□□ -2.06
RFXAPO00287 SNORA1.2-201ENST00000365189 134 ntBASIC2.17□□□□□ -2.06
RFXAPO00287 RNA5SP190-201ENST00000365222 118 ntBASIC2.17□□□□□ -2.06
RFXAPO00287 SNORA70.7-201ENST00000384159 133 ntBASIC2.17□□□□□ -2.06
RFXAPO00287 Y_RNA.448-201ENST00000384185 108 ntBASIC2.17□□□□□ -2.06
RFXAPO00287 RNU1-148P-201ENST00000384472 162 ntBASIC2.17□□□□□ -2.06
RFXAPO00287 MIR452-201ENST00000385020 85 ntBASIC2.17□□□□□ -2.06
RFXAPO00287 MIR136-201ENST00000385207 82 ntBASIC2.17□□□□□ -2.06
RFXAPO00287 RNU6-613P-201ENST00000410412 108 ntBASIC2.17□□□□□ -2.06
RFXAPO00287 AC245047.7-201ENST00000440265 293 ntBASIC2.17□□□□□ -2.06
RFXAPO00287 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.17□□□□□ -2.06
RFXAPO00287 MIR8065-201ENST00000620577 100 ntBASIC2.17□□□□□ -2.06
RFXAPO00287 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.16□□□□□ -2.06
RFXAPO00287 RNU6-524P-201ENST00000384270 107 ntBASIC2.16□□□□□ -2.06
RFXAPO00287 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RFXAPO00287 RNA5SP182-201ENST00000516064 82 ntBASIC2.16□□□□□ -2.06
RFXAPO00287 AC019288.1-201ENST00000557918 224 ntBASIC2.16□□□□□ -2.06
RFXAPO00287 MIR4439-201ENST00000583746 80 ntBASIC2.16□□□□□ -2.06
RFXAPO00287 AL359821.1-201ENST00000605519 182 ntBASIC2.16□□□□□ -2.06
RFXAPO00287 MIR8081-201ENST00000611533 95 ntBASIC2.16□□□□□ -2.06
RFXAPO00287 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
RFXAPO00287 SNORD38.1-201ENST00000363863 68 ntBASIC2.15□□□□□ -2.07
RFXAPO00287 RNU6-1321P-201ENST00000390905 107 ntBASIC2.15□□□□□ -2.07
RFXAPO00287 SUMO1P4-201ENST00000429430 302 ntBASIC2.15□□□□□ -2.07
RFXAPO00287 RNU1-98P-201ENST00000458992 160 ntBASIC2.15□□□□□ -2.07
RFXAPO00287 RNU7-35P-201ENST00000517174 62 ntBASIC2.15□□□□□ -2.07
RFXAPO00287 AC026271.5-201ENST00000577873 130 ntBASIC2.15□□□□□ -2.07
RFXAPO00287 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.15□□□□□ -2.07
RFXAPO00287 AP000648.3-201ENST00000623539 4507 ntBASIC2.15□□□□□ -2.07
RFXAPO00287 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
RFXAPO00287 RNU11-3P-201ENST00000391111 133 ntBASIC2.14□□□□□ -2.07
RFXAPO00287 Y_RNA.607-201ENST00000410597 98 ntBASIC2.14□□□□□ -2.07
RFXAPO00287 AP1B1P2-201ENST00000416196 106 ntBASIC2.14□□□□□ -2.07
RFXAPO00287 RPL31P63-201ENST00000422565 375 ntBASIC2.14□□□□□ -2.07
RFXAPO00287 RPS29P28-201ENST00000446439 141 ntBASIC2.14□□□□□ -2.07
RFXAPO00287 AC139453.2-201ENST00000487255 133 ntBASIC2.14□□□□□ -2.07
RFXAPO00287 MIR4712-201ENST00000583750 82 ntBASIC2.14□□□□□ -2.07
RFXAPO00287 MIR3616-201ENST00000584070 92 ntBASIC2.14□□□□□ -2.07
RFXAPO00287 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.14□□□□□ -2.07
RFXAPO00287 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.14□□□□□ -2.07
RFXAPO00287 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RFXAPO00287 MIR548G-201ENST00000408442 89 ntBASIC2.13□□□□□ -2.07
RFXAPO00287 MIR8055-201ENST00000610739 97 ntBASIC2.13□□□□□ -2.07
RFXAPO00287 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.13□□□□□ -2.07
RFXAPO00287 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
RFXAPO00287 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
RFXAPO00287 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.12□□□□□ -2.07
RFXAPO00287 RNU6-296P-201ENST00000384608 107 ntBASIC2.12□□□□□ -2.07
RFXAPO00287 Y_RNA.567-201ENST00000384736 106 ntBASIC2.12□□□□□ -2.07
RFXAPO00287 MIR627-201ENST00000384979 97 ntBASIC2.12□□□□□ -2.07
RFXAPO00287 MIR518E-201ENST00000385252 88 ntBASIC2.12□□□□□ -2.07
RFXAPO00287 SNORA48.3-201ENST00000391081 134 ntBASIC2.12□□□□□ -2.07
RFXAPO00287 RNU6-1086P-201ENST00000410930 100 ntBASIC2.12□□□□□ -2.07
RFXAPO00287 RNU7-26P-201ENST00000458980 63 ntBASIC2.12□□□□□ -2.07
RFXAPO00287 SNORA25.15-201ENST00000516487 89 ntBASIC2.12□□□□□ -2.07
RFXAPO00287 RNU7-137P-201ENST00000516788 62 ntBASIC2.12□□□□□ -2.07
RFXAPO00287 AL513043.2-201ENST00000573941 143 ntBASIC2.12□□□□□ -2.07
RFXAPO00287 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.12□□□□□ -2.07
RFXAPO00287 FAM106DP-201ENST00000586416 501 ntBASIC2.12□□□□□ -2.07
RFXAPO00287 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
RFXAPO00287 RNU6-1229P-201ENST00000364295 107 ntBASIC2.11□□□□□ -2.07
RFXAPO00287 MIR660-201ENST00000385235 97 ntBASIC2.11□□□□□ -2.07
RFXAPO00287 RNA5SP261-201ENST00000410536 106 ntBASIC2.11□□□□□ -2.07
RFXAPO00287 RNU6-602P-201ENST00000411155 105 ntBASIC2.11□□□□□ -2.07
RFXAPO00287 RPL23AP6-201ENST00000446637 472 ntBASIC2.11□□□□□ -2.07
RFXAPO00287 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.11□□□□□ -2.07
RFXAPO00287 MIR6895-201ENST00000613497 78 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms