Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 SNORA75.1-201ENST00000391130 148 ntBASIC-0.54□□□□□ -2.5
DFFAO00273 MIR1302-11-201ENST00000408051 138 ntBASIC-0.54□□□□□ -2.5
DFFAO00273 MIR1302-9-201ENST00000408365 138 ntBASIC-0.54□□□□□ -2.5
DFFAO00273 MIR1302-10-201ENST00000408734 138 ntBASIC-0.54□□□□□ -2.5
DFFAO00273 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-0.54□□□□□ -2.5
DFFAO00273 AC244505.6-201ENST00000452829 130 ntBASIC-0.54□□□□□ -2.5
DFFAO00273 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.54□□□□□ -2.5
DFFAO00273 RNA5SP285-201ENST00000516619 119 ntBASIC-0.54□□□□□ -2.5
DFFAO00273 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.54□□□□□ -2.5
DFFAO00273 AL360085.1-201ENST00000604713 532 ntBASIC-0.54□□□□□ -2.5
DFFAO00273 AC011921.3-201ENST00000605540 361 ntBASIC-0.54□□□□□ -2.5
DFFAO00273 MIR1302-2-201ENST00000607096 138 ntBASIC-0.54□□□□□ -2.5
DFFAO00273 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.54□□□□□ -2.5
DFFAO00273 snoU18.1-201ENST00000629629 71 ntBASIC-0.54□□□□□ -2.5
DFFAO00273 AC112487.2-201ENST00000637950 304 ntBASIC-0.54□□□□□ -2.5
DFFAO00273 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.55□□□□□ -2.5
DFFAO00273 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.55□□□□□ -2.5
DFFAO00273 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.55□□□□□ -2.5
DFFAO00273 RNY3P5-201ENST00000384127 102 ntBASIC-0.55□□□□□ -2.5
DFFAO00273 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.55□□□□□ -2.5
DFFAO00273 SNORD19B-201ENST00000459623 84 ntBASIC-0.55□□□□□ -2.5
DFFAO00273 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.55□□□□□ -2.5
DFFAO00273 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.55□□□□□ -2.5
DFFAO00273 CR383656.4-201ENST00000546909 122 ntBASIC-0.55□□□□□ -2.5
DFFAO00273 MIR3129-201ENST00000581095 76 ntBASIC-0.55□□□□□ -2.5
DFFAO00273 AL132765.2-201ENST00000610812 351 ntBASIC-0.55□□□□□ -2.5
DFFAO00273 AC006157.1-201ENST00000611750 366 ntBASIC-0.55□□□□□ -2.5
DFFAO00273 uc_338.28-201ENST00000612082 187 ntBASIC-0.55□□□□□ -2.5
DFFAO00273 AC093783.1-201ENST00000612976 329 ntBASIC-0.55□□□□□ -2.5
DFFAO00273 AC073869.9-201ENST00000641610 120 ntBASIC-0.55□□□□□ -2.5
DFFAO00273 MIR101-2-201ENST00000362195 79 ntBASIC-0.56□□□□□ -2.5
DFFAO00273 RNA5SP133-201ENST00000363368 119 ntBASIC-0.56□□□□□ -2.5
DFFAO00273 SNORD114-28-201ENST00000363610 72 ntBASIC-0.56□□□□□ -2.5
DFFAO00273 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.56□□□□□ -2.5
DFFAO00273 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.56□□□□□ -2.5
DFFAO00273 RNU6-702P-201ENST00000364982 107 ntBASIC-0.56□□□□□ -2.5
DFFAO00273 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.56□□□□□ -2.5
DFFAO00273 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.56□□□□□ -2.5
DFFAO00273 SNORA53-201ENST00000391141 249 ntBASIC-0.56□□□□□ -2.5
DFFAO00273 RNU7-161P-201ENST00000517289 62 ntBASIC-0.56□□□□□ -2.5
DFFAO00273 AC037487.3-201ENST00000606668 112 ntBASIC-0.56□□□□□ -2.5
DFFAO00273 MIR3666-201ENST00000607845 111 ntBASIC-0.56□□□□□ -2.5
DFFAO00273 MIR6759-201ENST00000638110 65 ntBASIC-0.56□□□□□ -2.5
DFFAO00273 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.57□□□□□ -2.5
DFFAO00273 RNA5SP275-201ENST00000363936 118 ntBASIC-0.57□□□□□ -2.5
DFFAO00273 RNU6-326P-201ENST00000365480 107 ntBASIC-0.57□□□□□ -2.5
DFFAO00273 SNORA63.7-201ENST00000365579 123 ntBASIC-0.57□□□□□ -2.5
DFFAO00273 MIR626-201ENST00000385032 94 ntBASIC-0.57□□□□□ -2.5
DFFAO00273 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.57□□□□□ -2.5
DFFAO00273 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.57□□□□□ -2.5
DFFAO00273 SNRPGP8-201ENST00000454064 226 ntBASIC-0.57□□□□□ -2.5
DFFAO00273 SNORA27.4-201ENST00000516650 95 ntBASIC-0.57□□□□□ -2.5
DFFAO00273 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
DFFAO00273 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.57□□□□□ -2.5
DFFAO00273 AC090574.1-201ENST00000623186 233 ntBASIC-0.57□□□□□ -2.5
DFFAO00273 MIR148A-201ENST00000362215 68 ntBASIC-0.58□□□□□ -2.5
DFFAO00273 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.58□□□□□ -2.5
DFFAO00273 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.58□□□□□ -2.5
DFFAO00273 RNU7-104P-201ENST00000459398 79 ntBASIC-0.58□□□□□ -2.5
DFFAO00273 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.58□□□□□ -2.5
DFFAO00273 U6atac.1-201ENST00000616025 117 ntBASIC-0.58□□□□□ -2.5
DFFAO00273 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.59□□□□□ -2.5
DFFAO00273 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.59□□□□□ -2.5
DFFAO00273 MT-TT-201ENST00000387460 66 ntBASIC-0.59□□□□□ -2.5
DFFAO00273 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.59□□□□□ -2.5
DFFAO00273 RPL21P38-201ENST00000418090 167 ntBASIC-0.59□□□□□ -2.5
DFFAO00273 AC096531.1-201ENST00000419107 107 ntBASIC-0.59□□□□□ -2.5
DFFAO00273 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.59□□□□□ -2.5
DFFAO00273 RNU6-893P-201ENST00000458841 100 ntBASIC-0.59□□□□□ -2.5
DFFAO00273 RNU7-79P-201ENST00000516082 62 ntBASIC-0.59□□□□□ -2.5
DFFAO00273 RNU7-70P-201ENST00000516941 66 ntBASIC-0.59□□□□□ -2.5
DFFAO00273 RNU6-897P-201ENST00000517135 105 ntBASIC-0.59□□□□□ -2.5
DFFAO00273 MIR8064-201ENST00000612863 90 ntBASIC-0.59□□□□□ -2.5
DFFAO00273 U6.109-201ENST00000636749 87 ntBASIC-0.59□□□□□ -2.5
DFFAO00273 MTND5P32-201ENST00000560711 1802 ntBASIC-0.59□□□□□ -2.5
DFFAO00273 SNORD41.1-201ENST00000391000 69 ntBASIC-0.6□□□□□ -2.51
DFFAO00273 RNA5SP300-201ENST00000391197 107 ntBASIC-0.6□□□□□ -2.51
DFFAO00273 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.6□□□□□ -2.51
DFFAO00273 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.61□□□□□ -2.51
DFFAO00273 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.61□□□□□ -2.51
DFFAO00273 RNA5SP403-201ENST00000363598 108 ntBASIC-0.61□□□□□ -2.51
DFFAO00273 SNORD49B-201ENST00000365172 72 ntBASIC-0.61□□□□□ -2.51
DFFAO00273 RNU6-211P-201ENST00000384047 107 ntBASIC-0.61□□□□□ -2.51
DFFAO00273 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.61□□□□□ -2.51
DFFAO00273 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
DFFAO00273 AC138393.2-201ENST00000414742 246 ntBASIC-0.61□□□□□ -2.51
DFFAO00273 AC109327.2-201ENST00000448339 378 ntBASIC-0.61□□□□□ -2.51
DFFAO00273 RNU7-35P-201ENST00000517174 62 ntBASIC-0.61□□□□□ -2.51
DFFAO00273 UBE2WP1-201ENST00000362030 340 ntBASIC-0.62□□□□□ -2.51
DFFAO00273 RNU4-73P-201ENST00000363164 141 ntBASIC-0.62□□□□□ -2.51
DFFAO00273 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.62□□□□□ -2.51
DFFAO00273 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.62□□□□□ -2.51
DFFAO00273 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.62□□□□□ -2.51
DFFAO00273 RNU4-70P-201ENST00000384579 139 ntBASIC-0.62□□□□□ -2.51
DFFAO00273 MIR876-201ENST00000401147 81 ntBASIC-0.62□□□□□ -2.51
DFFAO00273 RNU6-121P-201ENST00000410525 99 ntBASIC-0.62□□□□□ -2.51
DFFAO00273 HMGN2P22-201ENST00000427588 175 ntBASIC-0.62□□□□□ -2.51
DFFAO00273 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.62□□□□□ -2.51
DFFAO00273 AL365205.2-201ENST00000594586 68 ntBASIC-0.62□□□□□ -2.51
DFFAO00273 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms