Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 Y_RNA.552-201ENST00000384665 112 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 MIR608-201ENST00000384820 100 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 SNORA26-201ENST00000391286 122 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 SNORA79-201ENST00000408376 140 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 SNORD99-201ENST00000408612 74 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 RNU6-994P-201ENST00000410507 111 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 RNA5SP127-201ENST00000411051 133 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 RNU6-1135P-201ENST00000411083 103 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 AC113410.1-201ENST00000505029 247 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 SNORA81.3-201ENST00000517283 198 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 MTND5P41-201ENST00000517498 206 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 MIR6841-201ENST00000637129 72 ntBASIC0.61□□□□□ -2.31
TRIM49D1C9J1S8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 MIR30D-201ENST00000362283 70 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 RNU4-84P-201ENST00000364200 139 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 RNU6-580P-201ENST00000365159 107 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 RNU6-1292P-201ENST00000383856 107 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.470-201ENST00000384307 117 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.515-201ENST00000384535 112 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 MIR508-201ENST00000384857 115 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 MIR624-201ENST00000385217 97 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 AC096949.1-201ENST00000412047 152 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 MIR1270-201ENST00000459320 83 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 RNU7-120P-201ENST00000459334 63 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.651-201ENST00000459380 103 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 AC107297.1-201ENST00000459991 176 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 AL590095.2-201ENST00000604136 117 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.6□□□□□ -2.31
TRIM49D1C9J1S8 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.8-201ENST00000362353 102 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.240-201ENST00000364469 95 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 Y_RNA.242-201ENST00000364473 110 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 SNORA20-201ENST00000384662 132 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 RNU6-460P-201ENST00000391158 108 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 MIR1827-201ENST00000408549 66 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 RNU6-1165P-201ENST00000410119 107 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 RPS26P5-201ENST00000418544 335 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 snoU13.2-201ENST00000459201 104 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 RNA5SP436-201ENST00000516020 115 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 RNU7-53P-201ENST00000516705 60 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 RNU11-2P-201ENST00000516898 142 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 AC004812.1-201ENST00000540773 146 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 AC133485.1-201ENST00000567176 124 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 AC138907.6-201ENST00000568401 126 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 MIR6515-201ENST00000619843 57 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 AC021613.1-201ENST00000623880 111 ntBASIC0.59□□□□□ -2.31
TRIM49D1C9J1S8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
TRIM49D1C9J1S8 RNU6-349P-201ENST00000362402 107 ntBASIC0.58□□□□□ -2.32
TRIM49D1C9J1S8 RNU6-309P-201ENST00000364573 106 ntBASIC0.58□□□□□ -2.32
TRIM49D1C9J1S8 RNU4-11P-201ENST00000365287 132 ntBASIC0.58□□□□□ -2.32
TRIM49D1C9J1S8 MIR200A-201ENST00000384875 90 ntBASIC0.58□□□□□ -2.32
TRIM49D1C9J1S8 MIR563-201ENST00000385080 79 ntBASIC0.58□□□□□ -2.32
TRIM49D1C9J1S8 MT-TN-201ENST00000387400 73 ntBASIC0.58□□□□□ -2.32
TRIM49D1C9J1S8 SNORD111-201ENST00000408139 94 ntBASIC0.58□□□□□ -2.32
TRIM49D1C9J1S8 Y_RNA.617-201ENST00000410920 90 ntBASIC0.58□□□□□ -2.32
TRIM49D1C9J1S8 AC107027.2-201ENST00000512197 115 ntBASIC0.58□□□□□ -2.32
TRIM49D1C9J1S8 MIR4264-201ENST00000583520 66 ntBASIC0.58□□□□□ -2.32
TRIM49D1C9J1S8 AC108081.1-201ENST00000604358 221 ntBASIC0.58□□□□□ -2.32
TRIM49D1C9J1S8 AC072026.1-201ENST00000605023 201 ntBASIC0.58□□□□□ -2.32
TRIM49D1C9J1S8 MIR377-201ENST00000362145 69 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 MIR302B-201ENST00000362188 73 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 SNORA22.1-201ENST00000362701 134 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 Y_RNA.251-201ENST00000364551 99 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 Y_RNA.272-201ENST00000364696 102 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 RNU1-133P-201ENST00000364867 167 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 Y_RNA.294-201ENST00000364916 102 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 RNU6-934P-201ENST00000365154 107 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 Y_RNA.398-201ENST00000383952 99 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 SNORD116-18-201ENST00000383961 92 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 SNORD38B-201ENST00000384690 67 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 AC244098.3-201ENST00000424803 96 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 RNU6-240P-201ENST00000516098 97 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 RNU2-35P-201ENST00000516446 142 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 RNU6-126P-201ENST00000516685 103 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 AC022523.2-201ENST00000561045 150 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 Y_RNA.757-201ENST00000578934 114 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 MIR4676-201ENST00000583078 72 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 AP000753.3-201ENST00000604083 169 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 AL353765.1-201ENST00000605514 183 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 SNORD38B-202ENST00000625943 69 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 AC021753.1-201ENST00000635724 168 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 AL589743.1-201ENST00000551932 2712 ntBASIC0.57□□□□□ -2.32
TRIM49D1C9J1S8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
TRIM49D1C9J1S8 Y_RNA.29-201ENST00000362570 113 ntBASIC0.56□□□□□ -2.32
TRIM49D1C9J1S8 SNORA25.7-201ENST00000364375 127 ntBASIC0.56□□□□□ -2.32
TRIM49D1C9J1S8 RNU6-1067P-201ENST00000384752 107 ntBASIC0.56□□□□□ -2.32
TRIM49D1C9J1S8 MIR520F-201ENST00000384824 87 ntBASIC0.56□□□□□ -2.32
TRIM49D1C9J1S8 MIR520H-201ENST00000385126 88 ntBASIC0.56□□□□□ -2.32
TRIM49D1C9J1S8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.56□□□□□ -2.32
TRIM49D1C9J1S8 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
TRIM49D1C9J1S8 AL512326.2-201ENST00000426359 151 ntBASIC0.56□□□□□ -2.32
TRIM49D1C9J1S8 RNU7-197P-201ENST00000458836 62 ntBASIC0.56□□□□□ -2.32
TRIM49D1C9J1S8 RNU7-121P-201ENST00000516604 62 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms