Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 AC006254.2-201ENST00000603259 279 ntBASIC1.48□□□□□ -2.17
LINC01548A6NM66 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
LINC01548A6NM66 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
LINC01548A6NM66 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
LINC01548A6NM66 ZNF355P-201ENST00000427301 3216 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 Y_RNA.107-201ENST00000363190 121 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 RNU6-1099P-201ENST00000363533 107 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 RNU4-36P-201ENST00000364294 144 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 MIR488-201ENST00000365739 83 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 MIR504-201ENST00000385065 83 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 RNU6-1307P-201ENST00000391012 103 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 RPL31P63-201ENST00000422565 375 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 HMGN2P23-201ENST00000456759 269 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 RPL23AP42-201ENST00000471152 471 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.47□□□□□ -2.17
LINC01548A6NM66 RPS29P11-201ENST00000496507 171 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 RNU6-521P-201ENST00000516663 105 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 FAM71BP1-201ENST00000604431 523 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 AC012493.3-201ENST00000604494 112 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 MIR6845-201ENST00000613182 61 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
LINC01548A6NM66 MIR6715A-201ENST00000615929 79 ntBASIC1.47□□□□□ -2.17
LINC01548A6NM66 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
LINC01548A6NM66 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.46□□□□□ -2.17
LINC01548A6NM66 RNU6-832P-201ENST00000363319 107 ntBASIC1.46□□□□□ -2.18
LINC01548A6NM66 Y_RNA.354-201ENST00000365448 111 ntBASIC1.46□□□□□ -2.18
LINC01548A6NM66 RNU6-49P-201ENST00000384256 107 ntBASIC1.46□□□□□ -2.18
LINC01548A6NM66 RNU6-1237P-201ENST00000384777 107 ntBASIC1.46□□□□□ -2.18
LINC01548A6NM66 MIR583-201ENST00000384846 75 ntBASIC1.46□□□□□ -2.18
LINC01548A6NM66 snoU13.25-201ENST00000458945 104 ntBASIC1.46□□□□□ -2.18
LINC01548A6NM66 RN7SL274P-201ENST00000492268 272 ntBASIC1.46□□□□□ -2.18
LINC01548A6NM66 SCARNA23-201ENST00000516060 130 ntBASIC1.46□□□□□ -2.18
LINC01548A6NM66 RNU6-947P-201ENST00000516264 106 ntBASIC1.46□□□□□ -2.18
LINC01548A6NM66 RNU6-970P-201ENST00000516312 107 ntBASIC1.46□□□□□ -2.18
LINC01548A6NM66 RNU6-295P-201ENST00000516901 104 ntBASIC1.46□□□□□ -2.18
LINC01548A6NM66 RNU7-35P-201ENST00000517174 62 ntBASIC1.46□□□□□ -2.18
LINC01548A6NM66 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.46□□□□□ -2.18
LINC01548A6NM66 AL357312.1-201ENST00000603879 298 ntBASIC1.46□□□□□ -2.18
LINC01548A6NM66 MIR7843-201ENST00000622274 79 ntBASIC1.46□□□□□ -2.18
LINC01548A6NM66 Y_RNA.369-201ENST00000365568 117 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 RNU6-1201P-201ENST00000384227 107 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 MIR206-201ENST00000384872 86 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 MIR9-3-201ENST00000385084 90 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 MIR764-201ENST00000390811 85 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 MIR1302-7-201ENST00000408841 72 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 RNU6-1086P-201ENST00000410930 100 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 MTATP8P2-201ENST00000435212 202 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 HSPE1P24-201ENST00000450782 238 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 RNA5SP233-201ENST00000459153 113 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 RNA5SP182-201ENST00000516064 82 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 SNORD67.1-201ENST00000516618 108 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 RNU6-158P-201ENST00000517104 100 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 AP000942.3-201ENST00000603702 160 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 GHRLOS.1-201ENST00000610995 70 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 MIR8081-201ENST00000611533 95 ntBASIC1.45□□□□□ -2.18
LINC01548A6NM66 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
LINC01548A6NM66 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
LINC01548A6NM66 AL359851.1-201ENST00000569460 4997 ntBASIC1.44□□□□□ -2.18
LINC01548A6NM66 MIR302D-201ENST00000362275 68 ntBASIC1.44□□□□□ -2.18
LINC01548A6NM66 SNORD38B-201ENST00000384690 67 ntBASIC1.44□□□□□ -2.18
LINC01548A6NM66 SUMO2P12-201ENST00000405924 140 ntBASIC1.44□□□□□ -2.18
LINC01548A6NM66 AL356379.1-201ENST00000414105 126 ntBASIC1.44□□□□□ -2.18
LINC01548A6NM66 AL591806.2-201ENST00000433122 173 ntBASIC1.44□□□□□ -2.18
LINC01548A6NM66 RNU7-2P-201ENST00000516096 62 ntBASIC1.44□□□□□ -2.18
LINC01548A6NM66 RNU6-795P-201ENST00000516323 103 ntBASIC1.44□□□□□ -2.18
LINC01548A6NM66 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.44□□□□□ -2.18
LINC01548A6NM66 MIR548Z-201ENST00000584743 97 ntBASIC1.44□□□□□ -2.18
LINC01548A6NM66 SNORD38B-202ENST00000625943 69 ntBASIC1.44□□□□□ -2.18
LINC01548A6NM66 AC091304.10-201ENST00000641554 121 ntBASIC1.44□□□□□ -2.18
LINC01548A6NM66 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
LINC01548A6NM66 WWP1P1-201ENST00000466609 2769 ntBASIC1.43□□□□□ -2.18
LINC01548A6NM66 RNU6-1313P-201ENST00000362622 102 ntBASIC1.43□□□□□ -2.18
LINC01548A6NM66 Y_RNA.93-201ENST00000363066 109 ntBASIC1.43□□□□□ -2.18
LINC01548A6NM66 SNORA16.1-201ENST00000364597 132 ntBASIC1.43□□□□□ -2.18
LINC01548A6NM66 Y_RNA.466-201ENST00000384294 113 ntBASIC1.43□□□□□ -2.18
LINC01548A6NM66 Y_RNA.601-201ENST00000410500 113 ntBASIC1.43□□□□□ -2.18
LINC01548A6NM66 HMGN2P19-201ENST00000425149 265 ntBASIC1.43□□□□□ -2.18
LINC01548A6NM66 snoU13.9-201ENST00000458927 103 ntBASIC1.43□□□□□ -2.18
LINC01548A6NM66 AC012531.4-201ENST00000616509 177 ntBASIC1.43□□□□□ -2.18
LINC01548A6NM66 AC105081.1-201ENST00000617727 106 ntBASIC1.43□□□□□ -2.18
LINC01548A6NM66 MALAT1.1-201ENST00000618249 95 ntBASIC1.43□□□□□ -2.18
LINC01548A6NM66 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
LINC01548A6NM66 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
LINC01548A6NM66 RNU6-170P-201ENST00000362832 104 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 SNORD115-35-201ENST00000365122 82 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 Y_RNA.342-201ENST00000365352 113 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 Y_RNA.377-201ENST00000365644 108 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 Y_RNA.448-201ENST00000384185 108 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 RNY1P7-201ENST00000384743 110 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 RNA5SP489-201ENST00000410986 109 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.42□□□□□ -2.18
LINC01548A6NM66 RNU7-61P-201ENST00000515897 61 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 Y_RNA.659-201ENST00000515994 113 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 RNU7-79P-201ENST00000516082 62 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 RNU7-137P-201ENST00000516788 62 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 MIR4419B-201ENST00000577260 68 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 PRELID3BP2-201ENST00000605362 201 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 AL512310.12-203ENST00000640543 90 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 AC131280.1-202ENST00000624067 4211 ntBASIC1.42□□□□□ -2.18
LINC01548A6NM66 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms