Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RNU1-98P-201ENST00000458992 160 ntBASIC1.7□□□□□ -2.14
PTPDC1A2A3K4 RNU6-970P-201ENST00000516312 107 ntBASIC1.7□□□□□ -2.14
PTPDC1A2A3K4 RN7SKP88-201ENST00000516847 250 ntBASIC1.7□□□□□ -2.14
PTPDC1A2A3K4 AP003716.2-201ENST00000528260 108 ntBASIC1.7□□□□□ -2.14
PTPDC1A2A3K4 7SK.8-201ENST00000612110 250 ntBASIC1.7□□□□□ -2.14
PTPDC1A2A3K4 7SK.11-201ENST00000615477 250 ntBASIC1.7□□□□□ -2.14
PTPDC1A2A3K4 7SK.13-201ENST00000622040 250 ntBASIC1.7□□□□□ -2.14
PTPDC1A2A3K4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
PTPDC1A2A3K4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
PTPDC1A2A3K4 RNU6-834P-201ENST00000362367 110 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 Y_RNA.198-201ENST00000364013 98 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 Y_RNA.353-201ENST00000365440 108 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 Y_RNA.531-201ENST00000384589 121 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 SNORD38B-201ENST00000384690 67 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 RNU6-997P-201ENST00000384725 107 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 MIR1302-7-201ENST00000408841 72 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 RNU6-602P-201ENST00000411155 105 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 AC090844.1-201ENST00000422019 156 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 AL512326.2-201ENST00000426359 151 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 AC245047.7-201ENST00000440265 293 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 RNU7-113P-201ENST00000459273 62 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 AC004812.1-201ENST00000540773 146 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 SNORD38B-202ENST00000625943 69 ntBASIC1.69□□□□□ -2.14
PTPDC1A2A3K4 RNA5SP264-201ENST00000363115 107 ntBASIC1.68□□□□□ -2.14
PTPDC1A2A3K4 SNORA7.1-201ENST00000363750 139 ntBASIC1.68□□□□□ -2.14
PTPDC1A2A3K4 Y_RNA.273-201ENST00000364703 102 ntBASIC1.68□□□□□ -2.14
PTPDC1A2A3K4 Y_RNA.629-201ENST00000411368 105 ntBASIC1.68□□□□□ -2.14
PTPDC1A2A3K4 RNA5SP61-201ENST00000516453 100 ntBASIC1.68□□□□□ -2.14
PTPDC1A2A3K4 RNU11-2P-201ENST00000516898 142 ntBASIC1.68□□□□□ -2.14
PTPDC1A2A3K4 RNU6-1258P-201ENST00000516911 111 ntBASIC1.68□□□□□ -2.14
PTPDC1A2A3K4 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.68□□□□□ -2.14
PTPDC1A2A3K4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.68□□□□□ -2.14
PTPDC1A2A3K4 MIR8070-201ENST00000616510 88 ntBASIC1.68□□□□□ -2.14
PTPDC1A2A3K4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
PTPDC1A2A3K4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
PTPDC1A2A3K4 SNORD115-2-201ENST00000362842 82 ntBASIC1.67□□□□□ -2.14
PTPDC1A2A3K4 RNU6-1290P-201ENST00000362957 109 ntBASIC1.67□□□□□ -2.14
PTPDC1A2A3K4 Y_RNA.171-201ENST00000363760 102 ntBASIC1.67□□□□□ -2.14
PTPDC1A2A3K4 Y_RNA.213-201ENST00000364178 111 ntBASIC1.67□□□□□ -2.14
PTPDC1A2A3K4 SNORA25.9-201ENST00000365087 128 ntBASIC1.67□□□□□ -2.14
PTPDC1A2A3K4 SNORD115-20-201ENST00000365099 82 ntBASIC1.67□□□□□ -2.14
PTPDC1A2A3K4 RNU6-396P-201ENST00000365369 105 ntBASIC1.67□□□□□ -2.14
PTPDC1A2A3K4 MIR759-201ENST00000390224 91 ntBASIC1.67□□□□□ -2.14
PTPDC1A2A3K4 AC113410.1-201ENST00000505029 247 ntBASIC1.67□□□□□ -2.14
PTPDC1A2A3K4 SNORD33.1-201ENST00000516213 88 ntBASIC1.67□□□□□ -2.14
PTPDC1A2A3K4 MIR4421-201ENST00000578133 69 ntBASIC1.67□□□□□ -2.14
PTPDC1A2A3K4 MIR8065-201ENST00000620577 100 ntBASIC1.67□□□□□ -2.14
PTPDC1A2A3K4 MIR103A2-201ENST00000362154 78 ntBASIC1.66□□□□□ -2.14
PTPDC1A2A3K4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.66□□□□□ -2.14
PTPDC1A2A3K4 MIR499A-201ENST00000384903 122 ntBASIC1.66□□□□□ -2.14
PTPDC1A2A3K4 MIR1185-1-201ENST00000408598 86 ntBASIC1.66□□□□□ -2.14
PTPDC1A2A3K4 RNU6-735P-201ENST00000410612 107 ntBASIC1.66□□□□□ -2.14
PTPDC1A2A3K4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.66□□□□□ -2.14
PTPDC1A2A3K4 AL670379.3-201ENST00000605040 251 ntBASIC1.66□□□□□ -2.14
PTPDC1A2A3K4 RNU6-1104P-201ENST00000384723 104 ntBASIC1.65□□□□□ -2.15
PTPDC1A2A3K4 MIR548A3-201ENST00000385297 97 ntBASIC1.65□□□□□ -2.15
PTPDC1A2A3K4 RNU6-1064P-201ENST00000410626 104 ntBASIC1.65□□□□□ -2.15
PTPDC1A2A3K4 MIR2115-201ENST00000516657 100 ntBASIC1.65□□□□□ -2.15
PTPDC1A2A3K4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.65□□□□□ -2.15
PTPDC1A2A3K4 AC022523.2-201ENST00000561045 150 ntBASIC1.65□□□□□ -2.15
PTPDC1A2A3K4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.64□□□□□ -2.15
PTPDC1A2A3K4 Y_RNA.299-201ENST00000364973 94 ntBASIC1.64□□□□□ -2.15
PTPDC1A2A3K4 RNU6-1056P-201ENST00000383996 107 ntBASIC1.64□□□□□ -2.15
PTPDC1A2A3K4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.64□□□□□ -2.15
PTPDC1A2A3K4 Y_RNA.649-201ENST00000459077 103 ntBASIC1.64□□□□□ -2.15
PTPDC1A2A3K4 AC048334.1-201ENST00000477975 159 ntBASIC1.64□□□□□ -2.15
PTPDC1A2A3K4 RPS23P4-201ENST00000487908 423 ntBASIC1.64□□□□□ -2.15
PTPDC1A2A3K4 AL157834.3-201ENST00000615543 103 ntBASIC1.64□□□□□ -2.15
PTPDC1A2A3K4 RNU6-1144P-201ENST00000384247 104 ntBASIC1.63□□□□□ -2.15
PTPDC1A2A3K4 Y_RNA.470-201ENST00000384307 117 ntBASIC1.63□□□□□ -2.15
PTPDC1A2A3K4 RNU6-476P-201ENST00000384726 107 ntBASIC1.63□□□□□ -2.15
PTPDC1A2A3K4 RNA5SP33-201ENST00000516687 98 ntBASIC1.63□□□□□ -2.15
PTPDC1A2A3K4 MTND5P34-201ENST00000568888 325 ntBASIC1.63□□□□□ -2.15
PTPDC1A2A3K4 MIR3163-201ENST00000581592 73 ntBASIC1.63□□□□□ -2.15
PTPDC1A2A3K4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
PTPDC1A2A3K4 MT-TI-201ENST00000387365 69 ntBASIC1.62□□□□□ -2.15
PTPDC1A2A3K4 MT-TN-201ENST00000387400 73 ntBASIC1.62□□□□□ -2.15
PTPDC1A2A3K4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.62□□□□□ -2.15
PTPDC1A2A3K4 AC244023.1-201ENST00000426884 112 ntBASIC1.62□□□□□ -2.15
PTPDC1A2A3K4 SNORA31.2-201ENST00000516019 134 ntBASIC1.62□□□□□ -2.15
PTPDC1A2A3K4 MIR4264-201ENST00000583520 66 ntBASIC1.62□□□□□ -2.15
PTPDC1A2A3K4 AP000753.3-201ENST00000604083 169 ntBASIC1.62□□□□□ -2.15
PTPDC1A2A3K4 AC242498.1-201ENST00000604134 111 ntBASIC1.62□□□□□ -2.15
PTPDC1A2A3K4 MIR6516-201ENST00000630554 81 ntBASIC1.62□□□□□ -2.15
PTPDC1A2A3K4 RNY4P6-201ENST00000363667 96 ntBASIC1.61□□□□□ -2.15
PTPDC1A2A3K4 SNORD12C-201ENST00000386307 89 ntBASIC1.61□□□□□ -2.15
PTPDC1A2A3K4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.61□□□□□ -2.15
PTPDC1A2A3K4 AL161722.3-201ENST00000605789 2983 ntBASIC1.61□□□□□ -2.15
PTPDC1A2A3K4 MIR548A1-201ENST00000385041 97 ntBASIC1.6□□□□□ -2.15
PTPDC1A2A3K4 RNU6-613P-201ENST00000410412 108 ntBASIC1.6□□□□□ -2.15
PTPDC1A2A3K4 RNU4-69P-201ENST00000410677 143 ntBASIC1.6□□□□□ -2.15
PTPDC1A2A3K4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.6□□□□□ -2.15
PTPDC1A2A3K4 AL353770.2-201ENST00000620024 78 ntBASIC1.6□□□□□ -2.15
PTPDC1A2A3K4 RNU7-6P-201ENST00000516845 62 ntBASIC1.59□□□□□ -2.15
PTPDC1A2A3K4 MIR548AE2-201ENST00000583456 67 ntBASIC1.59□□□□□ -2.15
PTPDC1A2A3K4 SEPT14P17-201ENST00000617978 177 ntBASIC1.59□□□□□ -2.15
PTPDC1A2A3K4 MIR377-201ENST00000362145 69 ntBASIC1.58□□□□□ -2.16
PTPDC1A2A3K4 SNORA18-201ENST00000384416 132 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 201.9 ms