Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 Y_RNA.327-201ENST00000365201 102 ntBASIC1.67□□□□□ -2.14
CCDC163A0A0D9SF12 RNA5SP95-201ENST00000410319 137 ntBASIC1.67□□□□□ -2.14
CCDC163A0A0D9SF12 MIR2115-201ENST00000516657 100 ntBASIC1.67□□□□□ -2.14
CCDC163A0A0D9SF12 RNA5SP33-201ENST00000516687 98 ntBASIC1.67□□□□□ -2.14
CCDC163A0A0D9SF12 RNU6-1258P-201ENST00000516911 111 ntBASIC1.67□□□□□ -2.14
CCDC163A0A0D9SF12 AC004812.1-201ENST00000540773 146 ntBASIC1.67□□□□□ -2.14
CCDC163A0A0D9SF12 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.67□□□□□ -2.14
CCDC163A0A0D9SF12 MIR6516-201ENST00000630554 81 ntBASIC1.67□□□□□ -2.14
CCDC163A0A0D9SF12 RNU6-654P-201ENST00000364373 107 ntBASIC1.66□□□□□ -2.14
CCDC163A0A0D9SF12 SNORD58C-201ENST00000365223 64 ntBASIC1.66□□□□□ -2.14
CCDC163A0A0D9SF12 MIR759-201ENST00000390224 91 ntBASIC1.66□□□□□ -2.14
CCDC163A0A0D9SF12 RNU6-1154P-201ENST00000391001 104 ntBASIC1.66□□□□□ -2.14
CCDC163A0A0D9SF12 MIR1276-201ENST00000408707 83 ntBASIC1.66□□□□□ -2.14
CCDC163A0A0D9SF12 Y_RNA.617-201ENST00000410920 90 ntBASIC1.66□□□□□ -2.14
CCDC163A0A0D9SF12 Y_RNA.630-201ENST00000411370 108 ntBASIC1.66□□□□□ -2.14
CCDC163A0A0D9SF12 RN7SKP179-201ENST00000516126 217 ntBASIC1.66□□□□□ -2.14
CCDC163A0A0D9SF12 MIR3618-201ENST00000580330 88 ntBASIC1.66□□□□□ -2.14
CCDC163A0A0D9SF12 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC163A0A0D9SF12 MIR6504-201ENST00000613520 61 ntBASIC1.66□□□□□ -2.14
CCDC163A0A0D9SF12 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.14
CCDC163A0A0D9SF12 RNU6-60P-201ENST00000364792 103 ntBASIC1.65□□□□□ -2.15
CCDC163A0A0D9SF12 Y_RNA.430-201ENST00000384081 110 ntBASIC1.65□□□□□ -2.15
CCDC163A0A0D9SF12 AC244023.1-201ENST00000426884 112 ntBASIC1.65□□□□□ -2.15
CCDC163A0A0D9SF12 snoU13.18-201ENST00000459483 104 ntBASIC1.65□□□□□ -2.15
CCDC163A0A0D9SF12 SNORA70.22-201ENST00000517160 124 ntBASIC1.65□□□□□ -2.15
CCDC163A0A0D9SF12 AP003716.2-201ENST00000528260 108 ntBASIC1.65□□□□□ -2.15
CCDC163A0A0D9SF12 MIR4419B-201ENST00000577260 68 ntBASIC1.65□□□□□ -2.15
CCDC163A0A0D9SF12 AC242498.1-201ENST00000604134 111 ntBASIC1.65□□□□□ -2.15
CCDC163A0A0D9SF12 MIR26B-201ENST00000362251 77 ntBASIC1.64□□□□□ -2.15
CCDC163A0A0D9SF12 SNORD26-201ENST00000384147 75 ntBASIC1.64□□□□□ -2.15
CCDC163A0A0D9SF12 Y_RNA.531-201ENST00000384589 121 ntBASIC1.64□□□□□ -2.15
CCDC163A0A0D9SF12 MIR517C-201ENST00000385103 95 ntBASIC1.64□□□□□ -2.15
CCDC163A0A0D9SF12 RNU6-313P-201ENST00000516317 112 ntBASIC1.64□□□□□ -2.15
CCDC163A0A0D9SF12 RNU6-659P-201ENST00000516454 104 ntBASIC1.64□□□□□ -2.15
CCDC163A0A0D9SF12 RNU11-2P-201ENST00000516898 142 ntBASIC1.64□□□□□ -2.15
CCDC163A0A0D9SF12 AC022523.2-201ENST00000561045 150 ntBASIC1.64□□□□□ -2.15
CCDC163A0A0D9SF12 RNA5SP327-201ENST00000362494 101 ntBASIC1.63□□□□□ -2.15
CCDC163A0A0D9SF12 Y_RNA.363-201ENST00000365529 113 ntBASIC1.63□□□□□ -2.15
CCDC163A0A0D9SF12 Y_RNA.470-201ENST00000384307 117 ntBASIC1.63□□□□□ -2.15
CCDC163A0A0D9SF12 SNORA2B-201ENST00000384583 137 ntBASIC1.63□□□□□ -2.15
CCDC163A0A0D9SF12 SNORA75.2-201ENST00000391138 150 ntBASIC1.63□□□□□ -2.15
CCDC163A0A0D9SF12 SNORA75.3-201ENST00000391231 150 ntBASIC1.63□□□□□ -2.15
CCDC163A0A0D9SF12 RNA5SP237-201ENST00000410414 113 ntBASIC1.63□□□□□ -2.15
CCDC163A0A0D9SF12 RNA5SP136-201ENST00000410906 107 ntBASIC1.63□□□□□ -2.15
CCDC163A0A0D9SF12 MRPL35P3-201ENST00000421557 364 ntBASIC1.63□□□□□ -2.15
CCDC163A0A0D9SF12 AL591704.2-201ENST00000421658 181 ntBASIC1.63□□□□□ -2.15
CCDC163A0A0D9SF12 AC113410.1-201ENST00000505029 247 ntBASIC1.63□□□□□ -2.15
CCDC163A0A0D9SF12 AL359881.1-201ENST00000602916 267 ntBASIC1.63□□□□□ -2.15
CCDC163A0A0D9SF12 MIR6841-201ENST00000637129 72 ntBASIC1.63□□□□□ -2.15
CCDC163A0A0D9SF12 MTND5P18-201ENST00000445624 1801 ntBASIC1.62□□□□□ -2.15
CCDC163A0A0D9SF12 SNORA32-201ENST00000384072 121 ntBASIC1.62□□□□□ -2.15
CCDC163A0A0D9SF12 RNU6-1104P-201ENST00000384723 104 ntBASIC1.62□□□□□ -2.15
CCDC163A0A0D9SF12 MIR489-201ENST00000384923 84 ntBASIC1.62□□□□□ -2.15
CCDC163A0A0D9SF12 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.62□□□□□ -2.15
CCDC163A0A0D9SF12 AC023827.1-201ENST00000569247 97 ntBASIC1.62□□□□□ -2.15
CCDC163A0A0D9SF12 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.62□□□□□ -2.15
CCDC163A0A0D9SF12 SEPT14P17-201ENST00000617978 177 ntBASIC1.62□□□□□ -2.15
CCDC163A0A0D9SF12 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CCDC163A0A0D9SF12 RNU1-42P-201ENST00000364033 160 ntBASIC1.61□□□□□ -2.15
CCDC163A0A0D9SF12 SNORA25.8-201ENST00000364831 128 ntBASIC1.61□□□□□ -2.15
CCDC163A0A0D9SF12 Y_RNA.346-201ENST00000365385 112 ntBASIC1.61□□□□□ -2.15
CCDC163A0A0D9SF12 SNORA18-201ENST00000384416 132 ntBASIC1.61□□□□□ -2.15
CCDC163A0A0D9SF12 SNORA80D-201ENST00000384488 135 ntBASIC1.61□□□□□ -2.15
CCDC163A0A0D9SF12 SNORA22C-201ENST00000384614 134 ntBASIC1.61□□□□□ -2.15
CCDC163A0A0D9SF12 MIR588-201ENST00000384900 83 ntBASIC1.61□□□□□ -2.15
CCDC163A0A0D9SF12 SNORA67.6-201ENST00000391093 99 ntBASIC1.61□□□□□ -2.15
CCDC163A0A0D9SF12 AC019288.1-201ENST00000557918 224 ntBASIC1.61□□□□□ -2.15
CCDC163A0A0D9SF12 AL645939.4-201ENST00000604495 135 ntBASIC1.61□□□□□ -2.15
CCDC163A0A0D9SF12 AC008163.1-202ENST00000636004 2889 ntBASIC1.6□□□□□ -2.15
CCDC163A0A0D9SF12 SNORA7.1-201ENST00000363750 139 ntBASIC1.6□□□□□ -2.15
CCDC163A0A0D9SF12 Y_RNA.213-201ENST00000364178 111 ntBASIC1.6□□□□□ -2.15
CCDC163A0A0D9SF12 RNU6-342P-201ENST00000384521 104 ntBASIC1.6□□□□□ -2.15
CCDC163A0A0D9SF12 RNU6-1168P-201ENST00000390831 104 ntBASIC1.6□□□□□ -2.15
CCDC163A0A0D9SF12 RNU2-51P-201ENST00000410708 197 ntBASIC1.6□□□□□ -2.15
CCDC163A0A0D9SF12 RNU7-62P-201ENST00000458856 62 ntBASIC1.6□□□□□ -2.15
CCDC163A0A0D9SF12 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.6□□□□□ -2.15
CCDC163A0A0D9SF12 MIR4264-201ENST00000583520 66 ntBASIC1.6□□□□□ -2.15
CCDC163A0A0D9SF12 ZNF209P-201ENST00000593450 2304 ntBASIC1.6□□□□□ -2.15
CCDC163A0A0D9SF12 SUMO2P12-201ENST00000405924 140 ntBASIC1.59□□□□□ -2.15
CCDC163A0A0D9SF12 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC163A0A0D9SF12 RNU6-479P-201ENST00000516348 105 ntBASIC1.59□□□□□ -2.15
CCDC163A0A0D9SF12 RNU7-6P-201ENST00000516845 62 ntBASIC1.59□□□□□ -2.15
CCDC163A0A0D9SF12 MIR4421-201ENST00000578133 69 ntBASIC1.59□□□□□ -2.15
CCDC163A0A0D9SF12 Y_RNA.224-201ENST00000364308 111 ntBASIC1.58□□□□□ -2.16
CCDC163A0A0D9SF12 SNORD113-1-201ENST00000365321 69 ntBASIC1.58□□□□□ -2.16
CCDC163A0A0D9SF12 RNU6-1081P-201ENST00000384537 107 ntBASIC1.58□□□□□ -2.16
CCDC163A0A0D9SF12 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC163A0A0D9SF12 RNU6-613P-201ENST00000410412 108 ntBASIC1.58□□□□□ -2.16
CCDC163A0A0D9SF12 COX6CP6-201ENST00000490840 228 ntBASIC1.58□□□□□ -2.16
CCDC163A0A0D9SF12 SNORA31.24-201ENST00000517232 57 ntBASIC1.58□□□□□ -2.16
CCDC163A0A0D9SF12 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.58□□□□□ -2.16
CCDC163A0A0D9SF12 MTND5P34-201ENST00000568888 325 ntBASIC1.58□□□□□ -2.16
CCDC163A0A0D9SF12 MIR548AI-201ENST00000579940 88 ntBASIC1.58□□□□□ -2.16
CCDC163A0A0D9SF12 MIR548AE2-201ENST00000583456 67 ntBASIC1.58□□□□□ -2.16
CCDC163A0A0D9SF12 MIR3914-2-201ENST00000637339 95 ntBASIC1.58□□□□□ -2.16
CCDC163A0A0D9SF12 Y_RNA.198-201ENST00000364013 98 ntBASIC1.57□□□□□ -2.16
CCDC163A0A0D9SF12 Y_RNA.466-201ENST00000384294 113 ntBASIC1.57□□□□□ -2.16
CCDC163A0A0D9SF12 SNORA25-201ENST00000384384 134 ntBASIC1.57□□□□□ -2.16
CCDC163A0A0D9SF12 MIR548A1-201ENST00000385041 97 ntBASIC1.57□□□□□ -2.16
CCDC163A0A0D9SF12 RNU1-123P-201ENST00000458950 160 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms