Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU6-191P-201ENST00000516295 94 ntBASIC-0.8□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU6-314P-201ENST00000516574 104 ntBASIC-0.8□□□□□ -2.54
TRAV1-1A0A0B4J248 SNORD38.3-201ENST00000516599 73 ntBASIC-0.8□□□□□ -2.54
TRAV1-1A0A0B4J248 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.8□□□□□ -2.54
TRAV1-1A0A0B4J248 AC021613.1-201ENST00000623880 111 ntBASIC-0.8□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.81□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU4-16P-201ENST00000364737 141 ntBASIC-0.81□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.81□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.81□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.81□□□□□ -2.54
TRAV1-1A0A0B4J248 MIR3908-201ENST00000579798 126 ntBASIC-0.81□□□□□ -2.54
TRAV1-1A0A0B4J248 MIR4280-201ENST00000582178 76 ntBASIC-0.81□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.81□□□□□ -2.54
TRAV1-1A0A0B4J248 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.81□□□□□ -2.54
TRAV1-1A0A0B4J248 AC013791.1-201ENST00000616619 62 ntBASIC-0.81□□□□□ -2.54
TRAV1-1A0A0B4J248 MIR409-201ENST00000362237 79 ntBASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU4-10P-201ENST00000364383 140 ntBASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU6-449P-201ENST00000383914 107 ntBASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 MIR204-201ENST00000385200 110 ntBASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 MIR628-201ENST00000385229 95 ntBASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 AL603914.1-201ENST00000401964 204 ntBASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 YWHAEP2-201ENST00000580066 112 ntBASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 MIR548AG2-201ENST00000581228 64 ntBASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 U4.1-201ENST00000620349 87 ntBASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 uc_338.10-201ENST00000621872 182 ntBASIC-0.82□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.222-201ENST00000364264 102 ntBASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU6-937P-201ENST00000384325 106 ntBASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 SNORA20-201ENST00000384662 132 ntBASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.646-201ENST00000410980 101 ntBASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU7-35P-201ENST00000517174 62 ntBASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 AP000676.1-201ENST00000533307 52 ntBASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 MIR4724-201ENST00000579485 89 ntBASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 MIR548H5-201ENST00000580314 60 ntBASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 VN1R91P-201ENST00000594377 169 ntBASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 AL359881.1-201ENST00000602916 267 ntBASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.83□□□□□ -2.54
TRAV1-1A0A0B4J248 MIR367-201ENST00000362299 68 ntBASIC-0.84□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.84□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.84□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.84□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.573-201ENST00000384763 105 ntBASIC-0.84□□□□□ -2.54
TRAV1-1A0A0B4J248 MIR196A1-201ENST00000388006 70 ntBASIC-0.84□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.84□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU4-14P-201ENST00000410858 122 ntBASIC-0.84□□□□□ -2.54
TRAV1-1A0A0B4J248 RNU6-764P-201ENST00000516396 105 ntBASIC-0.84□□□□□ -2.54
TRAV1-1A0A0B4J248 SNORD67.1-201ENST00000516618 108 ntBASIC-0.84□□□□□ -2.54
TRAV1-1A0A0B4J248 MIR5688-201ENST00000580619 83 ntBASIC-0.84□□□□□ -2.54
TRAV1-1A0A0B4J248 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 SNORD114-29-201ENST00000364819 70 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 SNORA32-201ENST00000384072 121 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-154P-201ENST00000384306 106 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-310P-201ENST00000384655 107 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-21P-201ENST00000384710 107 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 RNY1P7-201ENST00000384743 110 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 MIR519E-201ENST00000385075 84 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-721P-201ENST00000410155 105 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 RNA5SP266-201ENST00000410273 108 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU2-55P-201ENST00000411146 174 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 AC093423.1-201ENST00000440817 142 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 AC097635.1-201ENST00000450678 155 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 snoU13.13-201ENST00000458842 104 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 MRPS35P2-201ENST00000508242 191 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU7-13P-201ENST00000516413 62 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU7-137P-201ENST00000516788 62 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-881P-201ENST00000516813 102 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 MTND5P40-201ENST00000559945 246 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 MIR5692C2-201ENST00000577959 77 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 MIR3129-201ENST00000581095 76 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 MIR5197-201ENST00000583721 112 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 AC097639.2-201ENST00000603159 172 ntBASIC-0.85□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.86□□□□□ -2.55
TRAV1-1A0A0B4J248 SNORD114-25-201ENST00000363742 72 ntBASIC-0.86□□□□□ -2.55
TRAV1-1A0A0B4J248 RNY3-201ENST00000365484 102 ntBASIC-0.86□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-484P-201ENST00000384016 107 ntBASIC-0.86□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.86□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-901P-201ENST00000384593 106 ntBASIC-0.86□□□□□ -2.55
TRAV1-1A0A0B4J248 SEPT14P8-201ENST00000508026 178 ntBASIC-0.86□□□□□ -2.55
TRAV1-1A0A0B4J248 AC021146.6-201ENST00000514659 117 ntBASIC-0.86□□□□□ -2.55
TRAV1-1A0A0B4J248 AC006504.6-201ENST00000590142 199 ntBASIC-0.86□□□□□ -2.55
TRAV1-1A0A0B4J248 C8orf59P2-201ENST00000603441 271 ntBASIC-0.86□□□□□ -2.55
TRAV1-1A0A0B4J248 AL121655.1-201ENST00000605811 308 ntBASIC-0.86□□□□□ -2.55
TRAV1-1A0A0B4J248 MIR6851-201ENST00000617060 67 ntBASIC-0.86□□□□□ -2.55
TRAV1-1A0A0B4J248 AC069503.3-201ENST00000618674 145 ntBASIC-0.86□□□□□ -2.55
TRAV1-1A0A0B4J248 AC048344.4-201ENST00000619744 527 ntBASIC-0.86□□□□□ -2.55
TRAV1-1A0A0B4J248 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.87□□□□□ -2.55
TRAV1-1A0A0B4J248 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms