Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 MIR759-201ENST00000390224 91 ntBASIC2.11□□□□□ -2.07
GTF3C3Q9Y5Q9 RNA5SP136-201ENST00000410906 107 ntBASIC2.11□□□□□ -2.07
GTF3C3Q9Y5Q9 AC023827.1-201ENST00000569247 97 ntBASIC2.11□□□□□ -2.07
GTF3C3Q9Y5Q9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
GTF3C3Q9Y5Q9 MIR200A-201ENST00000384875 90 ntBASIC2.1□□□□□ -2.07
GTF3C3Q9Y5Q9 AC067940.1-201ENST00000458411 300 ntBASIC2.1□□□□□ -2.07
GTF3C3Q9Y5Q9 RNA5SP404-201ENST00000517118 132 ntBASIC2.1□□□□□ -2.07
GTF3C3Q9Y5Q9 AC004812.1-201ENST00000540773 146 ntBASIC2.1□□□□□ -2.07
GTF3C3Q9Y5Q9 MIR219B-201ENST00000637023 88 ntBASIC2.1□□□□□ -2.07
GTF3C3Q9Y5Q9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC2.1□□□□□ -2.07
GTF3C3Q9Y5Q9 RNU1-124P-201ENST00000363861 145 ntBASIC2.09□□□□□ -2.07
GTF3C3Q9Y5Q9 RNU6-939P-201ENST00000384634 107 ntBASIC2.09□□□□□ -2.07
GTF3C3Q9Y5Q9 MIR18B-201ENST00000454574 71 ntBASIC2.09□□□□□ -2.07
GTF3C3Q9Y5Q9 AC108081.1-201ENST00000604358 221 ntBASIC2.09□□□□□ -2.07
GTF3C3Q9Y5Q9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
GTF3C3Q9Y5Q9 U8.2-201ENST00000363156 134 ntBASIC2.08□□□□□ -2.08
GTF3C3Q9Y5Q9 Y_RNA.294-201ENST00000364916 102 ntBASIC2.08□□□□□ -2.08
GTF3C3Q9Y5Q9 RNA5SP95-201ENST00000410319 137 ntBASIC2.08□□□□□ -2.08
GTF3C3Q9Y5Q9 RNU6-994P-201ENST00000410507 111 ntBASIC2.08□□□□□ -2.08
GTF3C3Q9Y5Q9 FABP5P4-201ENST00000437203 171 ntBASIC2.08□□□□□ -2.08
GTF3C3Q9Y5Q9 AC023790.1-201ENST00000482174 347 ntBASIC2.08□□□□□ -2.08
GTF3C3Q9Y5Q9 RNA5SP33-201ENST00000516687 98 ntBASIC2.08□□□□□ -2.08
GTF3C3Q9Y5Q9 MIR1273D-201ENST00000577266 86 ntBASIC2.08□□□□□ -2.08
GTF3C3Q9Y5Q9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.08□□□□□ -2.08
GTF3C3Q9Y5Q9 RNU1-42P-201ENST00000364033 160 ntBASIC2.07□□□□□ -2.08
GTF3C3Q9Y5Q9 Y_RNA.280-201ENST00000364765 112 ntBASIC2.07□□□□□ -2.08
GTF3C3Q9Y5Q9 Y_RNA.500-201ENST00000384466 111 ntBASIC2.07□□□□□ -2.08
GTF3C3Q9Y5Q9 Z98742.3-201ENST00000418637 326 ntBASIC2.07□□□□□ -2.08
GTF3C3Q9Y5Q9 RNU2-35P-201ENST00000516446 142 ntBASIC2.07□□□□□ -2.08
GTF3C3Q9Y5Q9 AL590808.1-201ENST00000618696 141 ntBASIC2.07□□□□□ -2.08
GTF3C3Q9Y5Q9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
GTF3C3Q9Y5Q9 Y_RNA.171-201ENST00000363760 102 ntBASIC2.06□□□□□ -2.08
GTF3C3Q9Y5Q9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.06□□□□□ -2.08
GTF3C3Q9Y5Q9 RNA5SP508-201ENST00000411327 119 ntBASIC2.06□□□□□ -2.08
GTF3C3Q9Y5Q9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.05□□□□□ -2.08
GTF3C3Q9Y5Q9 SNORA3.2-201ENST00000408221 125 ntBASIC2.05□□□□□ -2.08
GTF3C3Q9Y5Q9 RNU6-1165P-201ENST00000410119 107 ntBASIC2.05□□□□□ -2.08
GTF3C3Q9Y5Q9 AL512326.2-201ENST00000426359 151 ntBASIC2.05□□□□□ -2.08
GTF3C3Q9Y5Q9 RNU7-123P-201ENST00000515911 60 ntBASIC2.05□□□□□ -2.08
GTF3C3Q9Y5Q9 MIR4435-1-201ENST00000582552 80 ntBASIC2.05□□□□□ -2.08
GTF3C3Q9Y5Q9 AC064859.1-201ENST00000624741 174 ntBASIC2.05□□□□□ -2.08
GTF3C3Q9Y5Q9 RNU6-80P-201ENST00000384195 107 ntBASIC2.04□□□□□ -2.08
GTF3C3Q9Y5Q9 RNU6-1237P-201ENST00000384777 107 ntBASIC2.04□□□□□ -2.08
GTF3C3Q9Y5Q9 MT-TF-201ENST00000387314 71 ntBASIC2.04□□□□□ -2.08
GTF3C3Q9Y5Q9 Y_RNA.617-201ENST00000410920 90 ntBASIC2.04□□□□□ -2.08
GTF3C3Q9Y5Q9 RNU6-971P-201ENST00000516920 106 ntBASIC2.04□□□□□ -2.08
GTF3C3Q9Y5Q9 MIR4781-201ENST00000585250 76 ntBASIC2.04□□□□□ -2.08
GTF3C3Q9Y5Q9 MIR6740-201ENST00000618268 113 ntBASIC2.04□□□□□ -2.08
GTF3C3Q9Y5Q9 RNU6-934P-201ENST00000365154 107 ntBASIC2.03□□□□□ -2.08
GTF3C3Q9Y5Q9 SNORA18-201ENST00000384416 132 ntBASIC2.03□□□□□ -2.08
GTF3C3Q9Y5Q9 MIR563-201ENST00000385080 79 ntBASIC2.03□□□□□ -2.08
GTF3C3Q9Y5Q9 MIR1304-201ENST00000408243 91 ntBASIC2.03□□□□□ -2.08
GTF3C3Q9Y5Q9 RNU6-1086P-201ENST00000410930 100 ntBASIC2.03□□□□□ -2.08
GTF3C3Q9Y5Q9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
GTF3C3Q9Y5Q9 RPL39P25-201ENST00000449384 154 ntBASIC2.03□□□□□ -2.08
GTF3C3Q9Y5Q9 RN7SKP179-201ENST00000516126 217 ntBASIC2.03□□□□□ -2.08
GTF3C3Q9Y5Q9 RNY4P20-201ENST00000516678 93 ntBASIC2.03□□□□□ -2.08
GTF3C3Q9Y5Q9 RNU6-1258P-201ENST00000516911 111 ntBASIC2.03□□□□□ -2.08
GTF3C3Q9Y5Q9 AL136317.1-201ENST00000612653 226 ntBASIC2.03□□□□□ -2.08
GTF3C3Q9Y5Q9 SNORD114-24-201ENST00000365029 72 ntBASIC2.02□□□□□ -2.09
GTF3C3Q9Y5Q9 MIR150-201ENST00000385048 84 ntBASIC2.02□□□□□ -2.09
GTF3C3Q9Y5Q9 RNU6-955P-201ENST00000410497 104 ntBASIC2.02□□□□□ -2.09
GTF3C3Q9Y5Q9 RN7SKP223-201ENST00000410582 62 ntBASIC2.02□□□□□ -2.09
GTF3C3Q9Y5Q9 RNU6-81P-201ENST00000365608 104 ntBASIC2.01□□□□□ -2.09
GTF3C3Q9Y5Q9 MIR23A-201ENST00000385245 73 ntBASIC2.01□□□□□ -2.09
GTF3C3Q9Y5Q9 MIR1263-201ENST00000408324 86 ntBASIC2.01□□□□□ -2.09
GTF3C3Q9Y5Q9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.01□□□□□ -2.09
GTF3C3Q9Y5Q9 SNORA59A-201ENST00000459326 152 ntBASIC2.01□□□□□ -2.09
GTF3C3Q9Y5Q9 AL662814.1-201ENST00000617364 121 ntBASIC2.01□□□□□ -2.09
GTF3C3Q9Y5Q9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2□□□□□ -2.09
GTF3C3Q9Y5Q9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
GTF3C3Q9Y5Q9 RNU6-235P-201ENST00000362644 107 ntBASIC2□□□□□ -2.09
GTF3C3Q9Y5Q9 RPS23P4-201ENST00000487908 423 ntBASIC2□□□□□ -2.09
GTF3C3Q9Y5Q9 RNU6-1061P-201ENST00000516530 99 ntBASIC2□□□□□ -2.09
GTF3C3Q9Y5Q9 RNU6-789P-201ENST00000517105 102 ntBASIC2□□□□□ -2.09
GTF3C3Q9Y5Q9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
GTF3C3Q9Y5Q9 MIR1-1-201ENST00000362147 71 ntBASIC1.99□□□□□ -2.09
GTF3C3Q9Y5Q9 Y_RNA.213-201ENST00000364178 111 ntBASIC1.99□□□□□ -2.09
GTF3C3Q9Y5Q9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.99□□□□□ -2.09
GTF3C3Q9Y5Q9 RNU4-69P-201ENST00000410677 143 ntBASIC1.99□□□□□ -2.09
GTF3C3Q9Y5Q9 Y_RNA.346-201ENST00000365385 112 ntBASIC1.98□□□□□ -2.09
GTF3C3Q9Y5Q9 Y_RNA.470-201ENST00000384307 117 ntBASIC1.98□□□□□ -2.09
GTF3C3Q9Y5Q9 MIR942-201ENST00000401111 86 ntBASIC1.98□□□□□ -2.09
GTF3C3Q9Y5Q9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.98□□□□□ -2.09
GTF3C3Q9Y5Q9 COX6CP6-201ENST00000490840 228 ntBASIC1.98□□□□□ -2.09
GTF3C3Q9Y5Q9 SNORA4-201ENST00000584302 138 ntBASIC1.98□□□□□ -2.09
GTF3C3Q9Y5Q9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.98□□□□□ -2.09
GTF3C3Q9Y5Q9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
GTF3C3Q9Y5Q9 SNORD77B-201ENST00000391112 67 ntBASIC1.97□□□□□ -2.09
GTF3C3Q9Y5Q9 AC132825.6-201ENST00000638861 357 ntBASIC1.97□□□□□ -2.09
GTF3C3Q9Y5Q9 Y_RNA.198-201ENST00000364013 98 ntBASIC1.96□□□□□ -2.1
GTF3C3Q9Y5Q9 RNU6-959P-201ENST00000384671 107 ntBASIC1.96□□□□□ -2.1
GTF3C3Q9Y5Q9 RNU7-35P-201ENST00000517174 62 ntBASIC1.96□□□□□ -2.1
GTF3C3Q9Y5Q9 IGKV1-22-201ENST00000524313 326 ntBASIC1.96□□□□□ -2.1
GTF3C3Q9Y5Q9 AC068338.1-201ENST00000565567 176 ntBASIC1.96□□□□□ -2.1
GTF3C3Q9Y5Q9 AC141846.1-201ENST00000568348 142 ntBASIC1.96□□□□□ -2.1
GTF3C3Q9Y5Q9 MIR3910-1-201ENST00000580936 111 ntBASIC1.96□□□□□ -2.1
GTF3C3Q9Y5Q9 RNU6-94P-201ENST00000607728 107 ntBASIC1.96□□□□□ -2.1
GTF3C3Q9Y5Q9 RNU6-342P-201ENST00000384521 104 ntBASIC1.95□□□□□ -2.1
GTF3C3Q9Y5Q9 Y_RNA.528-201ENST00000384575 108 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms