Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AC074198.2-201ENST00000508153 258 ntBASIC1□□□□□ -2.25
YIPF1Q9Y548 MIR2115-201ENST00000516657 100 ntBASIC1□□□□□ -2.25
YIPF1Q9Y548 MIR3973-201ENST00000579824 107 ntBASIC1□□□□□ -2.25
YIPF1Q9Y548 AC022709.1-201ENST00000615967 87 ntBASIC1□□□□□ -2.25
YIPF1Q9Y548 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
YIPF1Q9Y548 MIR302B-201ENST00000362188 73 ntBASIC0.99□□□□□ -2.25
YIPF1Q9Y548 RNU1-124P-201ENST00000363861 145 ntBASIC0.99□□□□□ -2.25
YIPF1Q9Y548 RNU6-1082P-201ENST00000364574 107 ntBASIC0.99□□□□□ -2.25
YIPF1Q9Y548 RNU6-125P-201ENST00000384505 107 ntBASIC0.99□□□□□ -2.25
YIPF1Q9Y548 RNU6-239P-201ENST00000390990 99 ntBASIC0.99□□□□□ -2.25
YIPF1Q9Y548 RNU7-45P-201ENST00000459460 63 ntBASIC0.99□□□□□ -2.25
YIPF1Q9Y548 RNU7-80P-201ENST00000459562 61 ntBASIC0.99□□□□□ -2.25
YIPF1Q9Y548 SNORD124-201ENST00000459577 104 ntBASIC0.99□□□□□ -2.25
YIPF1Q9Y548 RNU6-182P-201ENST00000516970 105 ntBASIC0.99□□□□□ -2.25
YIPF1Q9Y548 RNU6-794P-201ENST00000517261 64 ntBASIC0.99□□□□□ -2.25
YIPF1Q9Y548 AC036111.3-201ENST00000526389 112 ntBASIC0.99□□□□□ -2.25
YIPF1Q9Y548 AC131055.1-201ENST00000584626 316 ntBASIC0.99□□□□□ -2.25
YIPF1Q9Y548 AL020996.3-201ENST00000606617 222 ntBASIC0.99□□□□□ -2.25
YIPF1Q9Y548 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
YIPF1Q9Y548 AL596211.1-201ENST00000569873 2277 ntBASIC0.98□□□□□ -2.25
YIPF1Q9Y548 RNU4-84P-201ENST00000364200 139 ntBASIC0.98□□□□□ -2.25
YIPF1Q9Y548 MIR548I3-201ENST00000408378 149 ntBASIC0.98□□□□□ -2.25
YIPF1Q9Y548 RNU6-613P-201ENST00000410412 108 ntBASIC0.98□□□□□ -2.25
YIPF1Q9Y548 AC244023.1-201ENST00000426884 112 ntBASIC0.98□□□□□ -2.25
YIPF1Q9Y548 RPS29P28-201ENST00000446439 141 ntBASIC0.98□□□□□ -2.25
YIPF1Q9Y548 RNU6-1149P-201ENST00000516810 97 ntBASIC0.98□□□□□ -2.25
YIPF1Q9Y548 SCARNA15-202ENST00000516881 127 ntBASIC0.98□□□□□ -2.25
YIPF1Q9Y548 RNU6-1223P-201ENST00000517124 104 ntBASIC0.98□□□□□ -2.25
YIPF1Q9Y548 AC242498.1-201ENST00000604134 111 ntBASIC0.98□□□□□ -2.25
YIPF1Q9Y548 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
YIPF1Q9Y548 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.98□□□□□ -2.25
YIPF1Q9Y548 SNORA2B-201ENST00000384583 137 ntBASIC0.97□□□□□ -2.25
YIPF1Q9Y548 RNU6-205P-201ENST00000390858 107 ntBASIC0.97□□□□□ -2.25
YIPF1Q9Y548 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.97□□□□□ -2.25
YIPF1Q9Y548 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.97□□□□□ -2.25
YIPF1Q9Y548 RNU7-121P-201ENST00000516604 62 ntBASIC0.97□□□□□ -2.25
YIPF1Q9Y548 HSPE1P19-201ENST00000603327 295 ntBASIC0.97□□□□□ -2.25
YIPF1Q9Y548 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.97□□□□□ -2.25
YIPF1Q9Y548 AC091932.4-201ENST00000623386 200 ntBASIC0.97□□□□□ -2.25
YIPF1Q9Y548 MIR6844-201ENST00000637122 62 ntBASIC0.97□□□□□ -2.25
YIPF1Q9Y548 Z97988.1-201ENST00000637697 135 ntBASIC0.97□□□□□ -2.25
YIPF1Q9Y548 MTND5P32-201ENST00000560711 1802 ntBASIC0.96□□□□□ -2.26
YIPF1Q9Y548 SNORD113.3-201ENST00000364630 78 ntBASIC0.96□□□□□ -2.26
YIPF1Q9Y548 Y_RNA.441-201ENST00000384123 112 ntBASIC0.96□□□□□ -2.26
YIPF1Q9Y548 Y_RNA.454-201ENST00000384224 113 ntBASIC0.96□□□□□ -2.26
YIPF1Q9Y548 SNORD38B-201ENST00000384690 67 ntBASIC0.96□□□□□ -2.26
YIPF1Q9Y548 RNU6-588P-201ENST00000410281 105 ntBASIC0.96□□□□□ -2.26
YIPF1Q9Y548 AC108059.2-201ENST00000434626 151 ntBASIC0.96□□□□□ -2.26
YIPF1Q9Y548 RNU7-70P-201ENST00000516941 66 ntBASIC0.96□□□□□ -2.26
YIPF1Q9Y548 RNU6-94P-201ENST00000607728 107 ntBASIC0.96□□□□□ -2.26
YIPF1Q9Y548 AC106800.4-201ENST00000614905 153 ntBASIC0.96□□□□□ -2.26
YIPF1Q9Y548 SNORD38B-202ENST00000625943 69 ntBASIC0.96□□□□□ -2.26
YIPF1Q9Y548 MIR3658-201ENST00000636291 56 ntBASIC0.96□□□□□ -2.26
YIPF1Q9Y548 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
YIPF1Q9Y548 SNORA1.1-201ENST00000364671 133 ntBASIC0.95□□□□□ -2.26
YIPF1Q9Y548 RNU1-133P-201ENST00000364867 167 ntBASIC0.95□□□□□ -2.26
YIPF1Q9Y548 Y_RNA.354-201ENST00000365448 111 ntBASIC0.95□□□□□ -2.26
YIPF1Q9Y548 SNORD111-201ENST00000408139 94 ntBASIC0.95□□□□□ -2.26
YIPF1Q9Y548 RNU6-1135P-201ENST00000411083 103 ntBASIC0.95□□□□□ -2.26
YIPF1Q9Y548 MIR4698-201ENST00000577795 80 ntBASIC0.95□□□□□ -2.26
YIPF1Q9Y548 AP000753.3-201ENST00000604083 169 ntBASIC0.95□□□□□ -2.26
YIPF1Q9Y548 MIR6717-201ENST00000622747 73 ntBASIC0.95□□□□□ -2.26
YIPF1Q9Y548 Y_RNA.150-201ENST00000363562 102 ntBASIC0.94□□□□□ -2.26
YIPF1Q9Y548 Y_RNA.272-201ENST00000364696 102 ntBASIC0.94□□□□□ -2.26
YIPF1Q9Y548 SNORA26.6-201ENST00000391256 115 ntBASIC0.94□□□□□ -2.26
YIPF1Q9Y548 RNU6-602P-201ENST00000411155 105 ntBASIC0.94□□□□□ -2.26
YIPF1Q9Y548 AC104465.1-201ENST00000611365 139 ntBASIC0.94□□□□□ -2.26
YIPF1Q9Y548 AC012676.2-201ENST00000619258 186 ntBASIC0.94□□□□□ -2.26
YIPF1Q9Y548 Y_RNA.52-201ENST00000362760 96 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 Y_RNA.168-201ENST00000363740 102 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 RNY1P11-201ENST00000363759 113 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 RNU6-818P-201ENST00000364837 108 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 SNORD114-24-201ENST00000365029 72 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 SNORA22-201ENST00000383907 134 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 SNORA22C-201ENST00000384614 134 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 MT-TN-201ENST00000387400 73 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 SNORD37.2-201ENST00000391075 66 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 SNORA75.5-201ENST00000391291 81 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 MIR942-201ENST00000401111 86 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 CYP3A137P-201ENST00000562436 69 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.93□□□□□ -2.26
YIPF1Q9Y548 MIR4264-201ENST00000583520 66 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 DNAJC19P2-201ENST00000593340 302 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 FTX_2.1-201ENST00000618816 94 ntBASIC0.93□□□□□ -2.26
YIPF1Q9Y548 RNU6-580P-201ENST00000365159 107 ntBASIC0.92□□□□□ -2.26
YIPF1Q9Y548 Y_RNA.497-201ENST00000384447 98 ntBASIC0.92□□□□□ -2.26
YIPF1Q9Y548 MIR200A-201ENST00000384875 90 ntBASIC0.92□□□□□ -2.26
YIPF1Q9Y548 SNORD12C-201ENST00000386307 89 ntBASIC0.92□□□□□ -2.26
YIPF1Q9Y548 RNU6-1319P-201ENST00000390855 104 ntBASIC0.92□□□□□ -2.26
YIPF1Q9Y548 RNU6-747P-201ENST00000390928 104 ntBASIC0.92□□□□□ -2.26
YIPF1Q9Y548 RNU6-241P-201ENST00000391148 104 ntBASIC0.92□□□□□ -2.26
YIPF1Q9Y548 RNU6-177P-201ENST00000411257 104 ntBASIC0.92□□□□□ -2.26
YIPF1Q9Y548 RPS3AP1-201ENST00000413190 320 ntBASIC0.92□□□□□ -2.26
YIPF1Q9Y548 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.92□□□□□ -2.26
YIPF1Q9Y548 MIR3646-201ENST00000578301 84 ntBASIC0.92□□□□□ -2.26
YIPF1Q9Y548 FAM71BP1-201ENST00000604431 523 ntBASIC0.92□□□□□ -2.26
YIPF1Q9Y548 MIR6515-201ENST00000619843 57 ntBASIC0.92□□□□□ -2.26
YIPF1Q9Y548 AL391516.1-201ENST00000554380 2449 ntBASIC0.91□□□□□ -2.26
YIPF1Q9Y548 Y_RNA.270-201ENST00000364693 104 ntBASIC0.91□□□□□ -2.26
YIPF1Q9Y548 RNU2-64P-201ENST00000411315 191 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms