Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 SNORD111.1-201ENST00000516421 86 ntBASIC2.37□□□□□ -2.03
BRPF3Q9ULD4 MIR548AO-201ENST00000579992 96 ntBASIC2.37□□□□□ -2.03
BRPF3Q9ULD4 AL162726.3-218ENST00000636401 95 ntBASIC2.37□□□□□ -2.03
BRPF3Q9ULD4 Z97988.1-201ENST00000637697 135 ntBASIC2.37□□□□□ -2.03
BRPF3Q9ULD4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
BRPF3Q9ULD4 RNU6-32P-201ENST00000383948 107 ntBASIC2.36□□□□□ -2.03
BRPF3Q9ULD4 RNU6-13P-201ENST00000384248 107 ntBASIC2.36□□□□□ -2.03
BRPF3Q9ULD4 Y_RNA.495-201ENST00000384435 112 ntBASIC2.36□□□□□ -2.03
BRPF3Q9ULD4 RNU6-12P-201ENST00000384604 107 ntBASIC2.36□□□□□ -2.03
BRPF3Q9ULD4 RNU6-41P-201ENST00000384741 107 ntBASIC2.36□□□□□ -2.03
BRPF3Q9ULD4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.36□□□□□ -2.03
BRPF3Q9ULD4 snoU13.9-201ENST00000458927 103 ntBASIC2.36□□□□□ -2.03
BRPF3Q9ULD4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.36□□□□□ -2.03
BRPF3Q9ULD4 MIR548AE2-201ENST00000583456 67 ntBASIC2.36□□□□□ -2.03
BRPF3Q9ULD4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
BRPF3Q9ULD4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.36□□□□□ -2.03
BRPF3Q9ULD4 RNU6-766P-201ENST00000362478 107 ntBASIC2.35□□□□□ -2.03
BRPF3Q9ULD4 SNORD115-19-201ENST00000363098 82 ntBASIC2.35□□□□□ -2.03
BRPF3Q9ULD4 SNORD115-18-201ENST00000363293 82 ntBASIC2.35□□□□□ -2.03
BRPF3Q9ULD4 SNORD115-17-201ENST00000364612 82 ntBASIC2.35□□□□□ -2.03
BRPF3Q9ULD4 RNU6-756P-201ENST00000383997 107 ntBASIC2.35□□□□□ -2.03
BRPF3Q9ULD4 SNORA51.5-201ENST00000384126 131 ntBASIC2.35□□□□□ -2.03
BRPF3Q9ULD4 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.35□□□□□ -2.03
BRPF3Q9ULD4 Y_RNA.328-201ENST00000365208 113 ntBASIC2.34□□□□□ -2.03
BRPF3Q9ULD4 RNU6-816P-201ENST00000390914 107 ntBASIC2.34□□□□□ -2.03
BRPF3Q9ULD4 RNU6-1268P-201ENST00000391214 107 ntBASIC2.34□□□□□ -2.03
BRPF3Q9ULD4 RNU6-1239P-201ENST00000391310 107 ntBASIC2.34□□□□□ -2.03
BRPF3Q9ULD4 MIR1912-201ENST00000410389 80 ntBASIC2.34□□□□□ -2.03
BRPF3Q9ULD4 RPL39P25-201ENST00000449384 154 ntBASIC2.34□□□□□ -2.03
BRPF3Q9ULD4 MIR4648-201ENST00000580107 72 ntBASIC2.34□□□□□ -2.03
BRPF3Q9ULD4 MIR3618-201ENST00000580330 88 ntBASIC2.34□□□□□ -2.03
BRPF3Q9ULD4 AL357312.1-201ENST00000603879 298 ntBASIC2.34□□□□□ -2.03
BRPF3Q9ULD4 Y_RNA.773-201ENST00000607168 90 ntBASIC2.34□□□□□ -2.03
BRPF3Q9ULD4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
BRPF3Q9ULD4 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
BRPF3Q9ULD4 U8.2-201ENST00000363156 134 ntBASIC2.33□□□□□ -2.04
BRPF3Q9ULD4 Y_RNA.354-201ENST00000365448 111 ntBASIC2.33□□□□□ -2.04
BRPF3Q9ULD4 SNORD77B-201ENST00000391112 67 ntBASIC2.33□□□□□ -2.04
BRPF3Q9ULD4 HMGN2P23-201ENST00000456759 269 ntBASIC2.33□□□□□ -2.04
BRPF3Q9ULD4 RNU6-250P-201ENST00000516958 103 ntBASIC2.33□□□□□ -2.04
BRPF3Q9ULD4 CYP3A52P-201ENST00000563326 91 ntBASIC2.33□□□□□ -2.04
BRPF3Q9ULD4 MIR3122-201ENST00000577243 73 ntBASIC2.33□□□□□ -2.04
BRPF3Q9ULD4 MIR8065-201ENST00000620577 100 ntBASIC2.33□□□□□ -2.04
BRPF3Q9ULD4 MIR8063-201ENST00000621930 81 ntBASIC2.33□□□□□ -2.04
BRPF3Q9ULD4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.33□□□□□ -2.04
BRPF3Q9ULD4 SNORD33-201ENST00000362761 85 ntBASIC2.32□□□□□ -2.04
BRPF3Q9ULD4 RNA5SP48-201ENST00000363969 126 ntBASIC2.32□□□□□ -2.04
BRPF3Q9ULD4 RNU6-602P-201ENST00000411155 105 ntBASIC2.32□□□□□ -2.04
BRPF3Q9ULD4 AC009474.2-201ENST00000451383 136 ntBASIC2.32□□□□□ -2.04
BRPF3Q9ULD4 GHRLOS.1-201ENST00000610995 70 ntBASIC2.32□□□□□ -2.04
BRPF3Q9ULD4 MIR1255B1-201ENST00000636325 63 ntBASIC2.32□□□□□ -2.04
BRPF3Q9ULD4 RNA5SP363-201ENST00000365072 115 ntBASIC2.31□□□□□ -2.04
BRPF3Q9ULD4 SNORA32-201ENST00000384072 121 ntBASIC2.31□□□□□ -2.04
BRPF3Q9ULD4 RNU6-1113P-201ENST00000384348 107 ntBASIC2.31□□□□□ -2.04
BRPF3Q9ULD4 AC090844.1-201ENST00000422019 156 ntBASIC2.31□□□□□ -2.04
BRPF3Q9ULD4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
BRPF3Q9ULD4 AC245047.7-201ENST00000440265 293 ntBASIC2.31□□□□□ -2.04
BRPF3Q9ULD4 MIR1270-201ENST00000459320 83 ntBASIC2.31□□□□□ -2.04
BRPF3Q9ULD4 AC005908.1-201ENST00000468701 347 ntBASIC2.31□□□□□ -2.04
BRPF3Q9ULD4 MIR4285-201ENST00000581001 85 ntBASIC2.31□□□□□ -2.04
BRPF3Q9ULD4 MIR4422-201ENST00000581938 83 ntBASIC2.31□□□□□ -2.04
BRPF3Q9ULD4 MIR3192-201ENST00000584920 77 ntBASIC2.31□□□□□ -2.04
BRPF3Q9ULD4 RNU6-1298P-201ENST00000362456 101 ntBASIC2.3□□□□□ -2.04
BRPF3Q9ULD4 SNORA70B-201ENST00000384210 135 ntBASIC2.3□□□□□ -2.04
BRPF3Q9ULD4 Y_RNA.507-201ENST00000384500 99 ntBASIC2.3□□□□□ -2.04
BRPF3Q9ULD4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.3□□□□□ -2.04
BRPF3Q9ULD4 AL096861.1-201ENST00000610899 123 ntBASIC2.3□□□□□ -2.04
BRPF3Q9ULD4 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.3□□□□□ -2.04
BRPF3Q9ULD4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
BRPF3Q9ULD4 RNU6-616P-201ENST00000384353 107 ntBASIC2.29□□□□□ -2.04
BRPF3Q9ULD4 RNU6-342P-201ENST00000384521 104 ntBASIC2.29□□□□□ -2.04
BRPF3Q9ULD4 HSPE1P24-201ENST00000450782 238 ntBASIC2.29□□□□□ -2.04
BRPF3Q9ULD4 MIR302D-201ENST00000362275 68 ntBASIC2.28□□□□□ -2.04
BRPF3Q9ULD4 RNU6-363P-201ENST00000362895 105 ntBASIC2.28□□□□□ -2.04
BRPF3Q9ULD4 SNORD38B-201ENST00000384690 67 ntBASIC2.28□□□□□ -2.04
BRPF3Q9ULD4 AC019129.1-201ENST00000403786 261 ntBASIC2.28□□□□□ -2.04
BRPF3Q9ULD4 SNORA11.2-201ENST00000408318 127 ntBASIC2.28□□□□□ -2.04
BRPF3Q9ULD4 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.28□□□□□ -2.04
BRPF3Q9ULD4 RNU6-537P-201ENST00000517277 103 ntBASIC2.28□□□□□ -2.04
BRPF3Q9ULD4 SNORD38B-202ENST00000625943 69 ntBASIC2.28□□□□□ -2.04
BRPF3Q9ULD4 Y_RNA.155-201ENST00000363632 101 ntBASIC2.27□□□□□ -2.05
BRPF3Q9ULD4 RNU4-67P-201ENST00000364569 141 ntBASIC2.27□□□□□ -2.05
BRPF3Q9ULD4 SNORA18-201ENST00000384416 132 ntBASIC2.27□□□□□ -2.05
BRPF3Q9ULD4 RNU6-947P-201ENST00000516264 106 ntBASIC2.27□□□□□ -2.05
BRPF3Q9ULD4 Y_RNA.677-201ENST00000516401 85 ntBASIC2.27□□□□□ -2.05
BRPF3Q9ULD4 RNA5SP170-201ENST00000517150 101 ntBASIC2.27□□□□□ -2.05
BRPF3Q9ULD4 AC141557.1-201ENST00000540982 400 ntBASIC2.27□□□□□ -2.05
BRPF3Q9ULD4 Y_RNA.78-201ENST00000362970 110 ntBASIC2.26□□□□□ -2.05
BRPF3Q9ULD4 SNORA19.1-201ENST00000410656 129 ntBASIC2.26□□□□□ -2.05
BRPF3Q9ULD4 MIR3945-201ENST00000581853 98 ntBASIC2.26□□□□□ -2.05
BRPF3Q9ULD4 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.26□□□□□ -2.05
BRPF3Q9ULD4 ZNF355P-201ENST00000427301 3216 ntBASIC2.25□□□□□ -2.05
BRPF3Q9ULD4 SNORD1A-201ENST00000364968 72 ntBASIC2.25□□□□□ -2.05
BRPF3Q9ULD4 RNU6-409P-201ENST00000384114 104 ntBASIC2.25□□□□□ -2.05
BRPF3Q9ULD4 MIR590-201ENST00000385008 97 ntBASIC2.25□□□□□ -2.05
BRPF3Q9ULD4 RN7SL429P-201ENST00000479090 223 ntBASIC2.25□□□□□ -2.05
BRPF3Q9ULD4 RN7SL489P-201ENST00000486185 223 ntBASIC2.25□□□□□ -2.05
BRPF3Q9ULD4 RN7SL327P-201ENST00000488659 223 ntBASIC2.25□□□□□ -2.05
BRPF3Q9ULD4 RN7SL853P-201ENST00000617250 223 ntBASIC2.25□□□□□ -2.05
BRPF3Q9ULD4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms