Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RNU6-41P-201ENST00000384741 107 ntBASIC1.85□□□□□ -2.11
CDC42EP3Q9UKI2 MIR17-201ENST00000385012 84 ntBASIC1.85□□□□□ -2.11
CDC42EP3Q9UKI2 SNORD41-201ENST00000386967 70 ntBASIC1.85□□□□□ -2.11
CDC42EP3Q9UKI2 MIR1302-5-201ENST00000408164 150 ntBASIC1.85□□□□□ -2.11
CDC42EP3Q9UKI2 AL356379.1-201ENST00000414105 126 ntBASIC1.85□□□□□ -2.11
CDC42EP3Q9UKI2 MIR4299-201ENST00000577899 72 ntBASIC1.85□□□□□ -2.11
CDC42EP3Q9UKI2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
CDC42EP3Q9UKI2 RNA5SP259-201ENST00000365541 109 ntBASIC1.84□□□□□ -2.11
CDC42EP3Q9UKI2 Y_RNA.470-201ENST00000384307 117 ntBASIC1.84□□□□□ -2.11
CDC42EP3Q9UKI2 SNORA64-201ENST00000384674 134 ntBASIC1.84□□□□□ -2.11
CDC42EP3Q9UKI2 AL451046.2-201ENST00000403074 277 ntBASIC1.84□□□□□ -2.11
CDC42EP3Q9UKI2 RPS3AP1-201ENST00000413190 320 ntBASIC1.84□□□□□ -2.11
CDC42EP3Q9UKI2 RPS27P21-201ENST00000486977 252 ntBASIC1.84□□□□□ -2.11
CDC42EP3Q9UKI2 RNU6-250P-201ENST00000516958 103 ntBASIC1.84□□□□□ -2.11
CDC42EP3Q9UKI2 MIR4498-201ENST00000577599 66 ntBASIC1.84□□□□□ -2.11
CDC42EP3Q9UKI2 MIR4781-201ENST00000585250 76 ntBASIC1.84□□□□□ -2.11
CDC42EP3Q9UKI2 AC103810.8-201ENST00000607347 118 ntBASIC1.84□□□□□ -2.11
CDC42EP3Q9UKI2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CDC42EP3Q9UKI2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.84□□□□□ -2.12
CDC42EP3Q9UKI2 MIR337-201ENST00000362281 93 ntBASIC1.83□□□□□ -2.12
CDC42EP3Q9UKI2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CDC42EP3Q9UKI2 AC019129.1-201ENST00000403786 261 ntBASIC1.83□□□□□ -2.12
CDC42EP3Q9UKI2 HMGN1P33-201ENST00000432945 451 ntBASIC1.83□□□□□ -2.12
CDC42EP3Q9UKI2 MIR1270-201ENST00000459320 83 ntBASIC1.83□□□□□ -2.12
CDC42EP3Q9UKI2 MIR3618-201ENST00000580330 88 ntBASIC1.83□□□□□ -2.12
CDC42EP3Q9UKI2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
CDC42EP3Q9UKI2 MIR8074-201ENST00000615081 81 ntBASIC1.83□□□□□ -2.12
CDC42EP3Q9UKI2 AP000553.5-201ENST00000641933 54 ntBASIC1.83□□□□□ -2.12
CDC42EP3Q9UKI2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDC42EP3Q9UKI2 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CDC42EP3Q9UKI2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDC42EP3Q9UKI2 Y_RNA.78-201ENST00000362970 110 ntBASIC1.82□□□□□ -2.12
CDC42EP3Q9UKI2 RNU6-756P-201ENST00000383997 107 ntBASIC1.82□□□□□ -2.12
CDC42EP3Q9UKI2 MIR1912-201ENST00000410389 80 ntBASIC1.82□□□□□ -2.12
CDC42EP3Q9UKI2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.82□□□□□ -2.12
CDC42EP3Q9UKI2 RNU7-41P-201ENST00000515917 61 ntBASIC1.82□□□□□ -2.12
CDC42EP3Q9UKI2 RNA5SP200-201ENST00000516360 103 ntBASIC1.82□□□□□ -2.12
CDC42EP3Q9UKI2 MIR4287-201ENST00000579398 78 ntBASIC1.82□□□□□ -2.12
CDC42EP3Q9UKI2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.82□□□□□ -2.12
CDC42EP3Q9UKI2 MIR8065-201ENST00000620577 100 ntBASIC1.82□□□□□ -2.12
CDC42EP3Q9UKI2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CDC42EP3Q9UKI2 SNORA1.1-201ENST00000364671 133 ntBASIC1.81□□□□□ -2.12
CDC42EP3Q9UKI2 SNORA51.5-201ENST00000384126 131 ntBASIC1.81□□□□□ -2.12
CDC42EP3Q9UKI2 RNU6-1113P-201ENST00000384348 107 ntBASIC1.81□□□□□ -2.12
CDC42EP3Q9UKI2 MIR221-201ENST00000385135 110 ntBASIC1.81□□□□□ -2.12
CDC42EP3Q9UKI2 AC104435.1-201ENST00000483483 166 ntBASIC1.81□□□□□ -2.12
CDC42EP3Q9UKI2 RNA5SP33-201ENST00000516687 98 ntBASIC1.81□□□□□ -2.12
CDC42EP3Q9UKI2 MIR514B-201ENST00000516774 80 ntBASIC1.81□□□□□ -2.12
CDC42EP3Q9UKI2 RNU6-537P-201ENST00000517277 103 ntBASIC1.81□□□□□ -2.12
CDC42EP3Q9UKI2 MIR548AO-201ENST00000579992 96 ntBASIC1.81□□□□□ -2.12
CDC42EP3Q9UKI2 MIR548AE2-201ENST00000583456 67 ntBASIC1.81□□□□□ -2.12
CDC42EP3Q9UKI2 Y_RNA.773-201ENST00000607168 90 ntBASIC1.81□□□□□ -2.12
CDC42EP3Q9UKI2 MIR4251-201ENST00000635819 61 ntBASIC1.81□□□□□ -2.12
CDC42EP3Q9UKI2 MIR302D-201ENST00000362275 68 ntBASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 RNU6-363P-201ENST00000362895 105 ntBASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 RNU1-17P-201ENST00000363022 152 ntBASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 SNORA67.3-201ENST00000384366 140 ntBASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 MIR583-201ENST00000384846 75 ntBASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 U8.13-201ENST00000390842 128 ntBASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 RNU6-816P-201ENST00000390914 107 ntBASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 RNU6-1268P-201ENST00000391214 107 ntBASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 RNU6-1239P-201ENST00000391310 107 ntBASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 RNU6-602P-201ENST00000411155 105 ntBASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 Y_RNA.694-201ENST00000516677 117 ntBASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 MIR4448-201ENST00000584360 86 ntBASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 AL627230.6-201ENST00000611129 280 ntBASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 MIR6766-201ENST00000622641 72 ntBASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
CDC42EP3Q9UKI2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CDC42EP3Q9UKI2 Y_RNA.43-201ENST00000362670 111 ntBASIC1.79□□□□□ -2.12
CDC42EP3Q9UKI2 Y_RNA.354-201ENST00000365448 111 ntBASIC1.79□□□□□ -2.12
CDC42EP3Q9UKI2 Y_RNA.508-201ENST00000384502 114 ntBASIC1.79□□□□□ -2.12
CDC42EP3Q9UKI2 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.79□□□□□ -2.12
CDC42EP3Q9UKI2 RNA5SP170-201ENST00000517150 101 ntBASIC1.79□□□□□ -2.12
CDC42EP3Q9UKI2 AL096840.1-201ENST00000603287 93 ntBASIC1.79□□□□□ -2.12
CDC42EP3Q9UKI2 AP001318.4-201ENST00000616637 121 ntBASIC1.79□□□□□ -2.12
CDC42EP3Q9UKI2 uc_338.20-201ENST00000621563 178 ntBASIC1.79□□□□□ -2.12
CDC42EP3Q9UKI2 MIR1255B1-201ENST00000636325 63 ntBASIC1.79□□□□□ -2.12
CDC42EP3Q9UKI2 Y_RNA.348-201ENST00000365403 103 ntBASIC1.78□□□□□ -2.12
CDC42EP3Q9UKI2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.78□□□□□ -2.12
CDC42EP3Q9UKI2 RNU6-904P-201ENST00000516206 101 ntBASIC1.78□□□□□ -2.12
CDC42EP3Q9UKI2 RNA5SP364-201ENST00000516938 78 ntBASIC1.78□□□□□ -2.12
CDC42EP3Q9UKI2 MIR3935-201ENST00000583472 104 ntBASIC1.78□□□□□ -2.12
CDC42EP3Q9UKI2 MIR3192-201ENST00000584920 77 ntBASIC1.78□□□□□ -2.12
CDC42EP3Q9UKI2 AL357312.1-201ENST00000603879 298 ntBASIC1.78□□□□□ -2.12
CDC42EP3Q9UKI2 GHRLOS.1-201ENST00000610995 70 ntBASIC1.78□□□□□ -2.12
CDC42EP3Q9UKI2 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDC42EP3Q9UKI2 RNA5SP48-201ENST00000363969 126 ntBASIC1.77□□□□□ -2.13
CDC42EP3Q9UKI2 AC090844.1-201ENST00000422019 156 ntBASIC1.77□□□□□ -2.13
CDC42EP3Q9UKI2 RPL39P25-201ENST00000449384 154 ntBASIC1.77□□□□□ -2.13
CDC42EP3Q9UKI2 AC009474.2-201ENST00000451383 136 ntBASIC1.77□□□□□ -2.13
CDC42EP3Q9UKI2 SNORD111.1-201ENST00000516421 86 ntBASIC1.77□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.77□□□□□ -2.13
CDC42EP3Q9UKI2 RNU6-922P-201ENST00000516753 99 ntBASIC1.77□□□□□ -2.13
CDC42EP3Q9UKI2 RNU7-35P-201ENST00000517174 62 ntBASIC1.77□□□□□ -2.13
CDC42EP3Q9UKI2 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.77□□□□□ -2.13
CDC42EP3Q9UKI2 ZNF355P-201ENST00000427301 3216 ntBASIC1.77□□□□□ -2.13
CDC42EP3Q9UKI2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
CDC42EP3Q9UKI2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms