Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNA5SP205-201ENST00000364653 136 ntBASIC2.03□□□□□ -2.08
DDX41Q9UJV9 RNA5SP190-201ENST00000365222 118 ntBASIC2.03□□□□□ -2.08
DDX41Q9UJV9 RPS3AP1-201ENST00000413190 320 ntBASIC2.03□□□□□ -2.08
DDX41Q9UJV9 RNU7-45P-201ENST00000459460 63 ntBASIC2.03□□□□□ -2.08
DDX41Q9UJV9 AL133373.1-201ENST00000497098 94 ntBASIC2.03□□□□□ -2.08
DDX41Q9UJV9 SNORA25.15-201ENST00000516487 89 ntBASIC2.03□□□□□ -2.08
DDX41Q9UJV9 AC024614.2-201ENST00000577584 372 ntBASIC2.03□□□□□ -2.08
DDX41Q9UJV9 MIR3192-201ENST00000584920 77 ntBASIC2.03□□□□□ -2.08
DDX41Q9UJV9 MIR8081-201ENST00000611533 95 ntBASIC2.03□□□□□ -2.08
DDX41Q9UJV9 AC025166.1-201ENST00000612411 163 ntBASIC2.03□□□□□ -2.08
DDX41Q9UJV9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
DDX41Q9UJV9 AL121890.5-201ENST00000620848 304 ntBASIC2.03□□□□□ -2.08
DDX41Q9UJV9 MIR6717-201ENST00000622747 73 ntBASIC2.03□□□□□ -2.08
DDX41Q9UJV9 AC009474.2-201ENST00000451383 136 ntBASIC2.02□□□□□ -2.09
DDX41Q9UJV9 SNORD13-201ENST00000459299 104 ntBASIC2.02□□□□□ -2.09
DDX41Q9UJV9 AL512310.8-201ENST00000550183 120 ntBASIC2.02□□□□□ -2.09
DDX41Q9UJV9 MIR3914-2-201ENST00000637339 95 ntBASIC2.02□□□□□ -2.09
DDX41Q9UJV9 SNORA22.1-201ENST00000362701 134 ntBASIC2.01□□□□□ -2.09
DDX41Q9UJV9 Y_RNA.298-201ENST00000364960 107 ntBASIC2.01□□□□□ -2.09
DDX41Q9UJV9 Y_RNA.430-201ENST00000384081 110 ntBASIC2.01□□□□□ -2.09
DDX41Q9UJV9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
DDX41Q9UJV9 RNA5SP144-201ENST00000410846 116 ntBASIC2.01□□□□□ -2.09
DDX41Q9UJV9 RNU6-781P-201ENST00000516377 101 ntBASIC2.01□□□□□ -2.09
DDX41Q9UJV9 RNU6-902P-201ENST00000517212 91 ntBASIC2.01□□□□□ -2.09
DDX41Q9UJV9 MIR4255-201ENST00000579351 72 ntBASIC2.01□□□□□ -2.09
DDX41Q9UJV9 MIR548AO-201ENST00000579992 96 ntBASIC2.01□□□□□ -2.09
DDX41Q9UJV9 snoU13.31-201ENST00000607291 104 ntBASIC2.01□□□□□ -2.09
DDX41Q9UJV9 MIR8055-201ENST00000610739 97 ntBASIC2.01□□□□□ -2.09
DDX41Q9UJV9 Y_RNA.528-201ENST00000384575 108 ntBASIC2□□□□□ -2.09
DDX41Q9UJV9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2□□□□□ -2.09
DDX41Q9UJV9 RN7SKP88-201ENST00000516847 250 ntBASIC2□□□□□ -2.09
DDX41Q9UJV9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2□□□□□ -2.09
DDX41Q9UJV9 7SK.8-201ENST00000612110 250 ntBASIC2□□□□□ -2.09
DDX41Q9UJV9 7SK.11-201ENST00000615477 250 ntBASIC2□□□□□ -2.09
DDX41Q9UJV9 7SK.13-201ENST00000622040 250 ntBASIC2□□□□□ -2.09
DDX41Q9UJV9 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2□□□□□ -2.09
DDX41Q9UJV9 Z97988.1-201ENST00000637697 135 ntBASIC2□□□□□ -2.09
DDX41Q9UJV9 AL161722.3-201ENST00000605789 2983 ntBASIC2□□□□□ -2.09
DDX41Q9UJV9 SNORA16.1-201ENST00000364597 132 ntBASIC1.99□□□□□ -2.09
DDX41Q9UJV9 SNORD38B-201ENST00000384690 67 ntBASIC1.99□□□□□ -2.09
DDX41Q9UJV9 Y_RNA.563-201ENST00000384707 108 ntBASIC1.99□□□□□ -2.09
DDX41Q9UJV9 AC245047.7-201ENST00000440265 293 ntBASIC1.99□□□□□ -2.09
DDX41Q9UJV9 COX6CP6-201ENST00000490840 228 ntBASIC1.99□□□□□ -2.09
DDX41Q9UJV9 SNORA31.4-201ENST00000516049 129 ntBASIC1.99□□□□□ -2.09
DDX41Q9UJV9 RNY4P20-201ENST00000516678 93 ntBASIC1.99□□□□□ -2.09
DDX41Q9UJV9 IGKV1-22-201ENST00000524313 326 ntBASIC1.99□□□□□ -2.09
DDX41Q9UJV9 SNORD38B-202ENST00000625943 69 ntBASIC1.99□□□□□ -2.09
DDX41Q9UJV9 MIR378A-201ENST00000362177 66 ntBASIC1.98□□□□□ -2.09
DDX41Q9UJV9 Y_RNA.213-201ENST00000364178 111 ntBASIC1.98□□□□□ -2.09
DDX41Q9UJV9 Y_RNA.226-201ENST00000364337 114 ntBASIC1.98□□□□□ -2.09
DDX41Q9UJV9 SNORA26.6-201ENST00000391256 115 ntBASIC1.98□□□□□ -2.09
DDX41Q9UJV9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.98□□□□□ -2.09
DDX41Q9UJV9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.98□□□□□ -2.09
DDX41Q9UJV9 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.98□□□□□ -2.09
DDX41Q9UJV9 MIR4285-201ENST00000581001 85 ntBASIC1.98□□□□□ -2.09
DDX41Q9UJV9 MIR4781-201ENST00000585250 76 ntBASIC1.98□□□□□ -2.09
DDX41Q9UJV9 MTND5P18-201ENST00000445624 1801 ntBASIC1.97□□□□□ -2.09
DDX41Q9UJV9 RNA5SP363-201ENST00000365072 115 ntBASIC1.97□□□□□ -2.09
DDX41Q9UJV9 RNU6-396P-201ENST00000365369 105 ntBASIC1.97□□□□□ -2.09
DDX41Q9UJV9 Y_RNA.525-201ENST00000384570 113 ntBASIC1.97□□□□□ -2.09
DDX41Q9UJV9 RNU6-1190P-201ENST00000410811 104 ntBASIC1.97□□□□□ -2.09
DDX41Q9UJV9 POLR2J4-204ENST00000418424 324 ntBASIC1.97□□□□□ -2.09
DDX41Q9UJV9 RPS27P16-201ENST00000425758 201 ntBASIC1.97□□□□□ -2.09
DDX41Q9UJV9 HMGN1P33-201ENST00000432945 451 ntBASIC1.97□□□□□ -2.09
DDX41Q9UJV9 RNU7-113P-201ENST00000459273 62 ntBASIC1.97□□□□□ -2.09
DDX41Q9UJV9 RNU7-123P-201ENST00000515911 60 ntBASIC1.97□□□□□ -2.09
DDX41Q9UJV9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.97□□□□□ -2.09
DDX41Q9UJV9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
DDX41Q9UJV9 RNU6-834P-201ENST00000362367 110 ntBASIC1.96□□□□□ -2.1
DDX41Q9UJV9 MIRLET7F2-201ENST00000385277 83 ntBASIC1.96□□□□□ -2.1
DDX41Q9UJV9 SNORA67.5-201ENST00000391036 107 ntBASIC1.96□□□□□ -2.1
DDX41Q9UJV9 RNU11-2P-201ENST00000516898 142 ntBASIC1.96□□□□□ -2.1
DDX41Q9UJV9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
DDX41Q9UJV9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
DDX41Q9UJV9 MIR337-201ENST00000362281 93 ntBASIC1.95□□□□□ -2.1
DDX41Q9UJV9 SNORA25.3-201ENST00000363205 127 ntBASIC1.95□□□□□ -2.1
DDX41Q9UJV9 Y_RNA.198-201ENST00000364013 98 ntBASIC1.95□□□□□ -2.1
DDX41Q9UJV9 Y_RNA.299-201ENST00000364973 94 ntBASIC1.95□□□□□ -2.1
DDX41Q9UJV9 Y_RNA.531-201ENST00000384589 121 ntBASIC1.95□□□□□ -2.1
DDX41Q9UJV9 Y_RNA.629-201ENST00000411368 105 ntBASIC1.95□□□□□ -2.1
DDX41Q9UJV9 RNU2-35P-201ENST00000516446 142 ntBASIC1.95□□□□□ -2.1
DDX41Q9UJV9 MIR2115-201ENST00000516657 100 ntBASIC1.95□□□□□ -2.1
DDX41Q9UJV9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.95□□□□□ -2.1
DDX41Q9UJV9 MIR4419B-201ENST00000577260 68 ntBASIC1.95□□□□□ -2.1
DDX41Q9UJV9 MIR6841-201ENST00000637129 72 ntBASIC1.95□□□□□ -2.1
DDX41Q9UJV9 MIR103A2-201ENST00000362154 78 ntBASIC1.94□□□□□ -2.1
DDX41Q9UJV9 RNA5SP264-201ENST00000363115 107 ntBASIC1.94□□□□□ -2.1
DDX41Q9UJV9 Y_RNA.273-201ENST00000364703 102 ntBASIC1.94□□□□□ -2.1
DDX41Q9UJV9 MIR548A3-201ENST00000385297 97 ntBASIC1.94□□□□□ -2.1
DDX41Q9UJV9 Y_RNA.630-201ENST00000411370 108 ntBASIC1.94□□□□□ -2.1
DDX41Q9UJV9 BTF3P4-201ENST00000418852 495 ntBASIC1.94□□□□□ -2.1
DDX41Q9UJV9 AC004812.1-201ENST00000540773 146 ntBASIC1.94□□□□□ -2.1
DDX41Q9UJV9 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.94□□□□□ -2.1
DDX41Q9UJV9 RNU6-1056P-201ENST00000383996 107 ntBASIC1.93□□□□□ -2.1
DDX41Q9UJV9 RNU6-165P-201ENST00000517170 99 ntBASIC1.93□□□□□ -2.1
DDX41Q9UJV9 AP000753.3-201ENST00000604083 169 ntBASIC1.93□□□□□ -2.1
DDX41Q9UJV9 AL670379.3-201ENST00000605040 251 ntBASIC1.93□□□□□ -2.1
DDX41Q9UJV9 MIR502-201ENST00000606349 86 ntBASIC1.93□□□□□ -2.1
DDX41Q9UJV9 MIR8065-201ENST00000620577 100 ntBASIC1.93□□□□□ -2.1
DDX41Q9UJV9 RNU6-602P-201ENST00000411155 105 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms