Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 RN7SKP88-201ENST00000516847 250 ntBASIC2.02□□□□□ -2.09
VTI1BQ9UEU0 IGKV3-31-201ENST00000523109 329 ntBASIC2.02□□□□□ -2.09
VTI1BQ9UEU0 PRELID3BP2-201ENST00000605362 201 ntBASIC2.02□□□□□ -2.09
VTI1BQ9UEU0 7SK.8-201ENST00000612110 250 ntBASIC2.02□□□□□ -2.09
VTI1BQ9UEU0 7SK.11-201ENST00000615477 250 ntBASIC2.02□□□□□ -2.09
VTI1BQ9UEU0 7SK.13-201ENST00000622040 250 ntBASIC2.02□□□□□ -2.09
VTI1BQ9UEU0 MIR103A2-201ENST00000362154 78 ntBASIC2.01□□□□□ -2.09
VTI1BQ9UEU0 RNA5SP264-201ENST00000363115 107 ntBASIC2.01□□□□□ -2.09
VTI1BQ9UEU0 RNU6-396P-201ENST00000365369 105 ntBASIC2.01□□□□□ -2.09
VTI1BQ9UEU0 MIR548D2-201ENST00000384955 97 ntBASIC2.01□□□□□ -2.09
VTI1BQ9UEU0 RNU4-69P-201ENST00000410677 143 ntBASIC2.01□□□□□ -2.09
VTI1BQ9UEU0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.01□□□□□ -2.09
VTI1BQ9UEU0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VTI1BQ9UEU0 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.01□□□□□ -2.09
VTI1BQ9UEU0 RNA5SP364-201ENST00000516938 78 ntBASIC2.01□□□□□ -2.09
VTI1BQ9UEU0 Y_RNA.709-201ENST00000516952 92 ntBASIC2.01□□□□□ -2.09
VTI1BQ9UEU0 MIR4679-2-201ENST00000578358 77 ntBASIC2.01□□□□□ -2.09
VTI1BQ9UEU0 MIR4448-201ENST00000584360 86 ntBASIC2.01□□□□□ -2.09
VTI1BQ9UEU0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.01□□□□□ -2.09
VTI1BQ9UEU0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
VTI1BQ9UEU0 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2□□□□□ -2.09
VTI1BQ9UEU0 SNORA70B-201ENST00000384210 135 ntBASIC2□□□□□ -2.09
VTI1BQ9UEU0 SUMO2P12-201ENST00000405924 140 ntBASIC2□□□□□ -2.09
VTI1BQ9UEU0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2□□□□□ -2.09
VTI1BQ9UEU0 MIR1185-1-201ENST00000408598 86 ntBASIC2□□□□□ -2.09
VTI1BQ9UEU0 RNU2-40P-201ENST00000410833 196 ntBASIC2□□□□□ -2.09
VTI1BQ9UEU0 RN7SL274P-201ENST00000492268 272 ntBASIC2□□□□□ -2.09
VTI1BQ9UEU0 RNU1-41P-201ENST00000516161 162 ntBASIC2□□□□□ -2.09
VTI1BQ9UEU0 RNU1-48P-201ENST00000516400 162 ntBASIC2□□□□□ -2.09
VTI1BQ9UEU0 MIR2115-201ENST00000516657 100 ntBASIC2□□□□□ -2.09
VTI1BQ9UEU0 RNU7-6P-201ENST00000516845 62 ntBASIC2□□□□□ -2.09
VTI1BQ9UEU0 RNU11-2P-201ENST00000516898 142 ntBASIC2□□□□□ -2.09
VTI1BQ9UEU0 MIR548AE2-201ENST00000583456 67 ntBASIC2□□□□□ -2.09
VTI1BQ9UEU0 MIR219B-201ENST00000637023 88 ntBASIC2□□□□□ -2.09
VTI1BQ9UEU0 U8.2-201ENST00000363156 134 ntBASIC1.99□□□□□ -2.09
VTI1BQ9UEU0 RNU6-1054P-201ENST00000411293 104 ntBASIC1.99□□□□□ -2.09
VTI1BQ9UEU0 AL035461.1-201ENST00000421490 332 ntBASIC1.99□□□□□ -2.09
VTI1BQ9UEU0 MIR4648-201ENST00000580107 72 ntBASIC1.99□□□□□ -2.09
VTI1BQ9UEU0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
VTI1BQ9UEU0 Y_RNA.281-201ENST00000364774 94 ntBASIC1.98□□□□□ -2.09
VTI1BQ9UEU0 Y_RNA.362-201ENST00000365518 110 ntBASIC1.98□□□□□ -2.09
VTI1BQ9UEU0 MT-TN-201ENST00000387400 73 ntBASIC1.98□□□□□ -2.09
VTI1BQ9UEU0 RNY4P18-201ENST00000391107 89 ntBASIC1.98□□□□□ -2.09
VTI1BQ9UEU0 AC063976.4-201ENST00000421971 163 ntBASIC1.98□□□□□ -2.09
VTI1BQ9UEU0 RN7SL429P-201ENST00000479090 223 ntBASIC1.98□□□□□ -2.09
VTI1BQ9UEU0 RN7SL489P-201ENST00000486185 223 ntBASIC1.98□□□□□ -2.09
VTI1BQ9UEU0 RN7SL327P-201ENST00000488659 223 ntBASIC1.98□□□□□ -2.09
VTI1BQ9UEU0 MIR3945-201ENST00000581853 98 ntBASIC1.98□□□□□ -2.09
VTI1BQ9UEU0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.98□□□□□ -2.09
VTI1BQ9UEU0 RN7SL853P-201ENST00000617250 223 ntBASIC1.98□□□□□ -2.09
VTI1BQ9UEU0 AL035470.1-201ENST00000622571 220 ntBASIC1.98□□□□□ -2.09
VTI1BQ9UEU0 SNORA64-201ENST00000384674 134 ntBASIC1.97□□□□□ -2.09
VTI1BQ9UEU0 RNU6-412P-201ENST00000516434 106 ntBASIC1.97□□□□□ -2.09
VTI1BQ9UEU0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.97□□□□□ -2.09
VTI1BQ9UEU0 MIR4264-201ENST00000583520 66 ntBASIC1.97□□□□□ -2.09
VTI1BQ9UEU0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.97□□□□□ -2.09
VTI1BQ9UEU0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
VTI1BQ9UEU0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
VTI1BQ9UEU0 SNORA18-201ENST00000384416 132 ntBASIC1.96□□□□□ -2.1
VTI1BQ9UEU0 RNU6-342P-201ENST00000384521 104 ntBASIC1.96□□□□□ -2.1
VTI1BQ9UEU0 Y_RNA.549-201ENST00000384657 102 ntBASIC1.96□□□□□ -2.1
VTI1BQ9UEU0 SNORD12C-201ENST00000386307 89 ntBASIC1.96□□□□□ -2.1
VTI1BQ9UEU0 SNORD77B-201ENST00000391112 67 ntBASIC1.96□□□□□ -2.1
VTI1BQ9UEU0 AC244023.1-201ENST00000426884 112 ntBASIC1.96□□□□□ -2.1
VTI1BQ9UEU0 MIR4285-201ENST00000581001 85 ntBASIC1.96□□□□□ -2.1
VTI1BQ9UEU0 AP000753.3-201ENST00000604083 169 ntBASIC1.96□□□□□ -2.1
VTI1BQ9UEU0 AC242498.1-201ENST00000604134 111 ntBASIC1.96□□□□□ -2.1
VTI1BQ9UEU0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.96□□□□□ -2.1
VTI1BQ9UEU0 AC087741.2-201ENST00000619415 172 ntBASIC1.96□□□□□ -2.1
VTI1BQ9UEU0 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
VTI1BQ9UEU0 MIR6516-201ENST00000630554 81 ntBASIC1.96□□□□□ -2.1
VTI1BQ9UEU0 AL589743.1-201ENST00000551932 2712 ntBASIC1.95□□□□□ -2.1
VTI1BQ9UEU0 Y_RNA.81-201ENST00000362997 102 ntBASIC1.95□□□□□ -2.1
VTI1BQ9UEU0 SNORD115-19-201ENST00000363098 82 ntBASIC1.95□□□□□ -2.1
VTI1BQ9UEU0 SNORD115-18-201ENST00000363293 82 ntBASIC1.95□□□□□ -2.1
VTI1BQ9UEU0 SNORD115-17-201ENST00000364612 82 ntBASIC1.95□□□□□ -2.1
VTI1BQ9UEU0 Y_RNA.344-201ENST00000365381 112 ntBASIC1.95□□□□□ -2.1
VTI1BQ9UEU0 SNORA32-201ENST00000384072 121 ntBASIC1.95□□□□□ -2.1
VTI1BQ9UEU0 RPL31P63-201ENST00000422565 375 ntBASIC1.95□□□□□ -2.1
VTI1BQ9UEU0 AC048334.1-201ENST00000477975 159 ntBASIC1.95□□□□□ -2.1
VTI1BQ9UEU0 AL391516.1-201ENST00000554380 2449 ntBASIC1.94□□□□□ -2.1
VTI1BQ9UEU0 SNORA11.2-201ENST00000408318 127 ntBASIC1.94□□□□□ -2.1
VTI1BQ9UEU0 RNU6-613P-201ENST00000410412 108 ntBASIC1.94□□□□□ -2.1
VTI1BQ9UEU0 MIR1270-201ENST00000459320 83 ntBASIC1.94□□□□□ -2.1
VTI1BQ9UEU0 SNORA31.2-201ENST00000516019 134 ntBASIC1.94□□□□□ -2.1
VTI1BQ9UEU0 RNU7-35P-201ENST00000517174 62 ntBASIC1.94□□□□□ -2.1
VTI1BQ9UEU0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.94□□□□□ -2.1
VTI1BQ9UEU0 MIR377-201ENST00000362145 69 ntBASIC1.93□□□□□ -2.1
VTI1BQ9UEU0 Y_RNA.85-201ENST00000363014 111 ntBASIC1.93□□□□□ -2.1
VTI1BQ9UEU0 RNU6-44P-201ENST00000384045 107 ntBASIC1.93□□□□□ -2.1
VTI1BQ9UEU0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.93□□□□□ -2.1
VTI1BQ9UEU0 SNORA63.5-201ENST00000363548 123 ntBASIC1.92□□□□□ -2.1
VTI1BQ9UEU0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VTI1BQ9UEU0 snoU13.2-201ENST00000459201 104 ntBASIC1.92□□□□□ -2.1
VTI1BQ9UEU0 RPL39P34-201ENST00000477141 156 ntBASIC1.92□□□□□ -2.1
VTI1BQ9UEU0 MIR5089-201ENST00000580047 84 ntBASIC1.92□□□□□ -2.1
VTI1BQ9UEU0 AL161722.3-201ENST00000605789 2983 ntBASIC1.92□□□□□ -2.1
VTI1BQ9UEU0 Y_RNA.49-201ENST00000362714 112 ntBASIC1.91□□□□□ -2.1
VTI1BQ9UEU0 RNA5SP237-201ENST00000410414 113 ntBASIC1.91□□□□□ -2.1
VTI1BQ9UEU0 RNU6-1086P-201ENST00000410930 100 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms