Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 Y_RNA.525-201ENST00000384570 113 ntBASIC1.66□□□□□ -2.14
DKK3Q9UBP4 SNORD28B-201ENST00000390993 75 ntBASIC1.66□□□□□ -2.14
DKK3Q9UBP4 RNA5SP136-201ENST00000410906 107 ntBASIC1.66□□□□□ -2.14
DKK3Q9UBP4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.66□□□□□ -2.14
DKK3Q9UBP4 AL513534.2-201ENST00000603836 250 ntBASIC1.66□□□□□ -2.14
DKK3Q9UBP4 AC106754.2-201ENST00000623006 233 ntBASIC1.66□□□□□ -2.14
DKK3Q9UBP4 AL596211.1-201ENST00000569873 2277 ntBASIC1.65□□□□□ -2.14
DKK3Q9UBP4 RNA5SP325-201ENST00000363756 130 ntBASIC1.65□□□□□ -2.15
DKK3Q9UBP4 RNU6-690P-201ENST00000365242 106 ntBASIC1.65□□□□□ -2.15
DKK3Q9UBP4 Y_RNA.346-201ENST00000365385 112 ntBASIC1.65□□□□□ -2.15
DKK3Q9UBP4 Y_RNA.366-201ENST00000365540 102 ntBASIC1.65□□□□□ -2.15
DKK3Q9UBP4 RNA5SP259-201ENST00000365541 109 ntBASIC1.65□□□□□ -2.15
DKK3Q9UBP4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.65□□□□□ -2.15
DKK3Q9UBP4 AC009474.2-201ENST00000451383 136 ntBASIC1.65□□□□□ -2.15
DKK3Q9UBP4 RNU7-73P-201ENST00000458743 63 ntBASIC1.65□□□□□ -2.15
DKK3Q9UBP4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.65□□□□□ -2.15
DKK3Q9UBP4 RNU6-240P-201ENST00000516098 97 ntBASIC1.65□□□□□ -2.15
DKK3Q9UBP4 RNU6-781P-201ENST00000516377 101 ntBASIC1.65□□□□□ -2.15
DKK3Q9UBP4 RNU7-53P-201ENST00000516705 60 ntBASIC1.65□□□□□ -2.15
DKK3Q9UBP4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.65□□□□□ -2.15
DKK3Q9UBP4 AC025166.1-201ENST00000612411 163 ntBASIC1.65□□□□□ -2.15
DKK3Q9UBP4 RMST_2.1-201ENST00000617263 136 ntBASIC1.65□□□□□ -2.15
DKK3Q9UBP4 MIR6779-201ENST00000617283 64 ntBASIC1.65□□□□□ -2.15
DKK3Q9UBP4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
DKK3Q9UBP4 MIR302B-201ENST00000362188 73 ntBASIC1.64□□□□□ -2.15
DKK3Q9UBP4 Y_RNA.630-201ENST00000411370 108 ntBASIC1.64□□□□□ -2.15
DKK3Q9UBP4 snoU13.9-201ENST00000458927 103 ntBASIC1.64□□□□□ -2.15
DKK3Q9UBP4 RNU2-11P-201ENST00000459191 187 ntBASIC1.64□□□□□ -2.15
DKK3Q9UBP4 RNU7-95P-201ENST00000459222 64 ntBASIC1.64□□□□□ -2.15
DKK3Q9UBP4 AC005908.1-201ENST00000468701 347 ntBASIC1.64□□□□□ -2.15
DKK3Q9UBP4 SNORA31.4-201ENST00000516049 129 ntBASIC1.64□□□□□ -2.15
DKK3Q9UBP4 MIR4791-201ENST00000607666 84 ntBASIC1.64□□□□□ -2.15
DKK3Q9UBP4 AC243994.1-201ENST00000618627 109 ntBASIC1.64□□□□□ -2.15
DKK3Q9UBP4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
DKK3Q9UBP4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
DKK3Q9UBP4 AL451046.2-201ENST00000403074 277 ntBASIC1.63□□□□□ -2.15
DKK3Q9UBP4 RNU6-955P-201ENST00000410497 104 ntBASIC1.63□□□□□ -2.15
DKK3Q9UBP4 RNU7-67P-201ENST00000459003 62 ntBASIC1.63□□□□□ -2.15
DKK3Q9UBP4 MIR4764-201ENST00000580680 88 ntBASIC1.63□□□□□ -2.15
DKK3Q9UBP4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
DKK3Q9UBP4 MIR342-201ENST00000362212 99 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 MIR302D-201ENST00000362275 68 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 RNU6-1056P-201ENST00000383996 107 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 MIR520C-201ENST00000385005 87 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 RNU6-1319P-201ENST00000390855 104 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 RNU6-747P-201ENST00000390928 104 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 RNU6-241P-201ENST00000391148 104 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 RNA5SP261-201ENST00000410536 106 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 RNU6-1064P-201ENST00000410626 104 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 RNU6-177P-201ENST00000411257 104 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 SNX2P2-201ENST00000424553 323 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 snoU13.16-201ENST00000459350 104 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 RNU6-958P-201ENST00000516995 106 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 MIR4303-201ENST00000581299 66 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 AC021613.1-201ENST00000623880 111 ntBASIC1.62□□□□□ -2.15
DKK3Q9UBP4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
DKK3Q9UBP4 MTND5P18-201ENST00000445624 1801 ntBASIC1.61□□□□□ -2.15
DKK3Q9UBP4 RNU6-1144P-201ENST00000384247 104 ntBASIC1.61□□□□□ -2.15
DKK3Q9UBP4 SNORD41-201ENST00000386967 70 ntBASIC1.61□□□□□ -2.15
DKK3Q9UBP4 RNU6-893P-201ENST00000458841 100 ntBASIC1.61□□□□□ -2.15
DKK3Q9UBP4 COX6CP6-201ENST00000490840 228 ntBASIC1.61□□□□□ -2.15
DKK3Q9UBP4 MIR4305-201ENST00000583252 102 ntBASIC1.61□□□□□ -2.15
DKK3Q9UBP4 AC021443.1-201ENST00000604478 211 ntBASIC1.61□□□□□ -2.15
DKK3Q9UBP4 AC008133.2-201ENST00000624540 351 ntBASIC1.61□□□□□ -2.15
DKK3Q9UBP4 Y_RNA.430-201ENST00000384081 110 ntBASIC1.6□□□□□ -2.15
DKK3Q9UBP4 SNORA51.10-201ENST00000384418 136 ntBASIC1.6□□□□□ -2.15
DKK3Q9UBP4 Y_RNA.528-201ENST00000384575 108 ntBASIC1.6□□□□□ -2.15
DKK3Q9UBP4 RNU6-476P-201ENST00000384726 107 ntBASIC1.6□□□□□ -2.15
DKK3Q9UBP4 MIR3152-201ENST00000579801 74 ntBASIC1.6□□□□□ -2.15
DKK3Q9UBP4 MIR4422-201ENST00000581938 83 ntBASIC1.6□□□□□ -2.15
DKK3Q9UBP4 AL357312.1-201ENST00000603879 298 ntBASIC1.6□□□□□ -2.15
DKK3Q9UBP4 AL020996.3-201ENST00000606617 222 ntBASIC1.6□□□□□ -2.15
DKK3Q9UBP4 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.6□□□□□ -2.15
DKK3Q9UBP4 SNORD33-201ENST00000362761 85 ntBASIC1.59□□□□□ -2.15
DKK3Q9UBP4 Y_RNA.298-201ENST00000364960 107 ntBASIC1.59□□□□□ -2.15
DKK3Q9UBP4 RNU6-215P-201ENST00000365169 102 ntBASIC1.59□□□□□ -2.15
DKK3Q9UBP4 SNORA26.6-201ENST00000391256 115 ntBASIC1.59□□□□□ -2.15
DKK3Q9UBP4 MIR1263-201ENST00000408324 86 ntBASIC1.59□□□□□ -2.15
DKK3Q9UBP4 RNA5SP144-201ENST00000410846 116 ntBASIC1.59□□□□□ -2.15
DKK3Q9UBP4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.59□□□□□ -2.15
DKK3Q9UBP4 HSPE1P24-201ENST00000450782 238 ntBASIC1.59□□□□□ -2.15
DKK3Q9UBP4 RPS29P23-201ENST00000458635 123 ntBASIC1.59□□□□□ -2.15
DKK3Q9UBP4 RNU7-164P-201ENST00000459221 62 ntBASIC1.59□□□□□ -2.15
DKK3Q9UBP4 HSPE1P19-201ENST00000603327 295 ntBASIC1.59□□□□□ -2.15
DKK3Q9UBP4 AL670379.3-201ENST00000605040 251 ntBASIC1.59□□□□□ -2.15
DKK3Q9UBP4 MIR8055-201ENST00000610739 97 ntBASIC1.59□□□□□ -2.15
DKK3Q9UBP4 Y_RNA.198-201ENST00000364013 98 ntBASIC1.58□□□□□ -2.16
DKK3Q9UBP4 MIR570-201ENST00000384917 97 ntBASIC1.58□□□□□ -2.16
DKK3Q9UBP4 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
DKK3Q9UBP4 RNU6-913P-201ENST00000390913 95 ntBASIC1.58□□□□□ -2.16
DKK3Q9UBP4 RNU1-78P-201ENST00000391248 165 ntBASIC1.58□□□□□ -2.16
DKK3Q9UBP4 SNORD33.1-201ENST00000516213 88 ntBASIC1.58□□□□□ -2.16
DKK3Q9UBP4 RNY4P20-201ENST00000516678 93 ntBASIC1.58□□□□□ -2.16
DKK3Q9UBP4 SNORD53B-201ENST00000577887 78 ntBASIC1.58□□□□□ -2.16
DKK3Q9UBP4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.58□□□□□ -2.16
DKK3Q9UBP4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.58□□□□□ -2.16
DKK3Q9UBP4 MIR6841-201ENST00000637129 72 ntBASIC1.58□□□□□ -2.16
DKK3Q9UBP4 MIR26B-201ENST00000362251 77 ntBASIC1.57□□□□□ -2.16
DKK3Q9UBP4 SNORD1A-201ENST00000364968 72 ntBASIC1.57□□□□□ -2.16
DKK3Q9UBP4 SNORD20-201ENST00000384550 80 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 187.2 ms