Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-639P-201ENST00000384074 107 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 MIR616-201ENST00000385293 97 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 SNORD12C-201ENST00000386307 89 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 AL606845.1-201ENST00000404881 255 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 RNU6-1190P-201ENST00000410811 104 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.650-201ENST00000459002 102 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.777-201ENST00000516982 102 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 RNU6-1137P-201ENST00000517073 99 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.771-201ENST00000598668 102 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 AL356055.1-201ENST00000602528 446 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 AC008608.1-201ENST00000603910 127 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 uc_338.16-201ENST00000621804 95 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.789-201ENST00000622480 102 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 MIR6717-201ENST00000622747 73 ntBASIC0.26□□□□□ -2.37
CLCF1Q9UBD9 MIR30D-201ENST00000362283 70 ntBASIC0.25□□□□□ -2.37
CLCF1Q9UBD9 RNU6-740P-201ENST00000364734 105 ntBASIC0.25□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.304-201ENST00000365011 112 ntBASIC0.25□□□□□ -2.37
CLCF1Q9UBD9 RNA5SP117-201ENST00000365294 118 ntBASIC0.25□□□□□ -2.37
CLCF1Q9UBD9 SNORA33.2-201ENST00000365413 134 ntBASIC0.25□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.351-201ENST00000365436 96 ntBASIC0.25□□□□□ -2.37
CLCF1Q9UBD9 RNU6-713P-201ENST00000384761 107 ntBASIC0.25□□□□□ -2.37
CLCF1Q9UBD9 SNORD71-201ENST00000411292 86 ntBASIC0.25□□□□□ -2.37
CLCF1Q9UBD9 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.25□□□□□ -2.37
CLCF1Q9UBD9 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.25□□□□□ -2.37
CLCF1Q9UBD9 SNORD2.1-201ENST00000458762 69 ntBASIC0.25□□□□□ -2.37
CLCF1Q9UBD9 RNU7-80P-201ENST00000459562 61 ntBASIC0.25□□□□□ -2.37
CLCF1Q9UBD9 SNORA25.12-201ENST00000516202 82 ntBASIC0.25□□□□□ -2.37
CLCF1Q9UBD9 RNU6-797P-201ENST00000363101 109 ntBASIC0.24□□□□□ -2.37
CLCF1Q9UBD9 snoU2_19.4-201ENST00000364329 80 ntBASIC0.24□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.237-201ENST00000364439 102 ntBASIC0.24□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.454-201ENST00000384224 113 ntBASIC0.24□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.542-201ENST00000384641 111 ntBASIC0.24□□□□□ -2.37
CLCF1Q9UBD9 SNORA79-201ENST00000408376 140 ntBASIC0.24□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.590-201ENST00000410140 107 ntBASIC0.24□□□□□ -2.37
CLCF1Q9UBD9 SNORA40.8-201ENST00000411034 126 ntBASIC0.24□□□□□ -2.37
CLCF1Q9UBD9 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
CLCF1Q9UBD9 RNU6-448P-201ENST00000517052 107 ntBASIC0.24□□□□□ -2.37
CLCF1Q9UBD9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.24□□□□□ -2.37
CLCF1Q9UBD9 U2.14-201ENST00000615943 113 ntBASIC0.24□□□□□ -2.37
CLCF1Q9UBD9 AP001282.2-201ENST00000616149 309 ntBASIC0.24□□□□□ -2.37
CLCF1Q9UBD9 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.24□□□□□ -2.37
CLCF1Q9UBD9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 MIR330-201ENST00000362196 94 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 RNU6-653P-201ENST00000363074 106 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 RNA5SP517-201ENST00000364724 117 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 SNORA1-201ENST00000384107 130 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 MIR518A1-201ENST00000385068 85 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 RNU6-1109P-201ENST00000391187 107 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 SNORA26.6-201ENST00000391256 115 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 RPL39P25-201ENST00000449384 154 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.679-201ENST00000516416 91 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 RNA5SP94-201ENST00000516917 108 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 MIR3152-201ENST00000579801 74 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 AC044792.1-201ENST00000593294 196 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 U6.104-201ENST00000637979 90 ntBASIC0.23□□□□□ -2.37
CLCF1Q9UBD9 MIR335-201ENST00000362173 94 ntBASIC0.22□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.23-201ENST00000362496 106 ntBASIC0.22□□□□□ -2.37
CLCF1Q9UBD9 RNU6-728P-201ENST00000365375 104 ntBASIC0.22□□□□□ -2.37
CLCF1Q9UBD9 SNORD93-201ENST00000408813 74 ntBASIC0.22□□□□□ -2.37
CLCF1Q9UBD9 RNA5SP237-201ENST00000410414 113 ntBASIC0.22□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.618-201ENST00000410949 107 ntBASIC0.22□□□□□ -2.37
CLCF1Q9UBD9 MTCYBP6-201ENST00000441810 138 ntBASIC0.22□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.701-201ENST00000516812 110 ntBASIC0.22□□□□□ -2.37
CLCF1Q9UBD9 RNU6-453P-201ENST00000516819 85 ntBASIC0.22□□□□□ -2.37
CLCF1Q9UBD9 AC022523.2-201ENST00000561045 150 ntBASIC0.22□□□□□ -2.37
CLCF1Q9UBD9 MIR5197-201ENST00000583721 112 ntBASIC0.22□□□□□ -2.37
CLCF1Q9UBD9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.22□□□□□ -2.37
CLCF1Q9UBD9 MIR924-201ENST00000638017 53 ntBASIC0.22□□□□□ -2.37
CLCF1Q9UBD9 Y_RNA.258-201ENST00000364613 105 ntBASIC0.21□□□□□ -2.38
CLCF1Q9UBD9 Y_RNA.430-201ENST00000384081 110 ntBASIC0.21□□□□□ -2.38
CLCF1Q9UBD9 RNU6-651P-201ENST00000411040 105 ntBASIC0.21□□□□□ -2.38
CLCF1Q9UBD9 RNU7-45P-201ENST00000459460 63 ntBASIC0.21□□□□□ -2.38
CLCF1Q9UBD9 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.21□□□□□ -2.38
CLCF1Q9UBD9 MIR3678-201ENST00000578455 94 ntBASIC0.21□□□□□ -2.38
CLCF1Q9UBD9 MIR3129-201ENST00000581095 76 ntBASIC0.21□□□□□ -2.38
CLCF1Q9UBD9 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.21□□□□□ -2.38
CLCF1Q9UBD9 AL365265.1-201ENST00000621045 234 ntBASIC0.21□□□□□ -2.38
CLCF1Q9UBD9 SNORD44.1-201ENST00000363202 61 ntBASIC0.2□□□□□ -2.38
CLCF1Q9UBD9 RNU6-1292P-201ENST00000383856 107 ntBASIC0.2□□□□□ -2.38
CLCF1Q9UBD9 SNORA20-201ENST00000384662 132 ntBASIC0.2□□□□□ -2.38
CLCF1Q9UBD9 RNU6-381P-201ENST00000391259 108 ntBASIC0.2□□□□□ -2.38
CLCF1Q9UBD9 RNU4-83P-201ENST00000410863 133 ntBASIC0.2□□□□□ -2.38
CLCF1Q9UBD9 AL358176.2-201ENST00000425769 204 ntBASIC0.2□□□□□ -2.38
CLCF1Q9UBD9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.2□□□□□ -2.38
CLCF1Q9UBD9 MIR4282-201ENST00000583613 67 ntBASIC0.2□□□□□ -2.38
CLCF1Q9UBD9 AC023932.2-201ENST00000603176 175 ntBASIC0.2□□□□□ -2.38
CLCF1Q9UBD9 MIR8087-201ENST00000612745 78 ntBASIC0.2□□□□□ -2.38
CLCF1Q9UBD9 AL662814.1-201ENST00000617364 121 ntBASIC0.2□□□□□ -2.38
CLCF1Q9UBD9 AC091932.4-201ENST00000623386 200 ntBASIC0.2□□□□□ -2.38
CLCF1Q9UBD9 AL596211.1-201ENST00000569873 2277 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 RNU4-17P-201ENST00000365598 141 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 MIR1302-6-201ENST00000408466 90 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 AC108740.1-201ENST00000498629 225 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 RNU6-469P-201ENST00000516253 101 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 RNU7-70P-201ENST00000516941 66 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 RNA5SP330-201ENST00000517096 96 ntBASIC0.19□□□□□ -2.38
CLCF1Q9UBD9 AP003327.1-201ENST00000529684 127 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 234.9 ms