Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 MIR653-201ENST00000385279 96 ntBASIC2.45□□□□□ -2.02
CNTN3Q9P232 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.45□□□□□ -2.02
CNTN3Q9P232 AC244636.1-201ENST00000421152 228 ntBASIC2.45□□□□□ -2.02
CNTN3Q9P232 HMGN1P33-201ENST00000432945 451 ntBASIC2.45□□□□□ -2.02
CNTN3Q9P232 AC026421.1-201ENST00000519101 163 ntBASIC2.45□□□□□ -2.02
CNTN3Q9P232 AL512310.12-203ENST00000640543 90 ntBASIC2.45□□□□□ -2.02
CNTN3Q9P232 RNU6-1313P-201ENST00000362622 102 ntBASIC2.44□□□□□ -2.02
CNTN3Q9P232 SNORA16B-201ENST00000364674 135 ntBASIC2.44□□□□□ -2.02
CNTN3Q9P232 SNORD115-35-201ENST00000365122 82 ntBASIC2.44□□□□□ -2.02
CNTN3Q9P232 RNU6-203P-201ENST00000384038 104 ntBASIC2.44□□□□□ -2.02
CNTN3Q9P232 SNORA31.11-201ENST00000516528 139 ntBASIC2.44□□□□□ -2.02
CNTN3Q9P232 DEFB122-202ENST00000569013 197 ntBASIC2.44□□□□□ -2.02
CNTN3Q9P232 MIR5694-201ENST00000581190 76 ntBASIC2.44□□□□□ -2.02
CNTN3Q9P232 AC012531.4-201ENST00000616509 177 ntBASIC2.44□□□□□ -2.02
CNTN3Q9P232 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.44□□□□□ -2.02
CNTN3Q9P232 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
CNTN3Q9P232 U8.2-201ENST00000363156 134 ntBASIC2.43□□□□□ -2.02
CNTN3Q9P232 MIR221-201ENST00000385135 110 ntBASIC2.43□□□□□ -2.02
CNTN3Q9P232 AC245047.7-201ENST00000440265 293 ntBASIC2.43□□□□□ -2.02
CNTN3Q9P232 RNA5SP233-201ENST00000459153 113 ntBASIC2.43□□□□□ -2.02
CNTN3Q9P232 RNU6-795P-201ENST00000516323 103 ntBASIC2.43□□□□□ -2.02
CNTN3Q9P232 RNU7-35P-201ENST00000517174 62 ntBASIC2.43□□□□□ -2.02
CNTN3Q9P232 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.43□□□□□ -2.02
CNTN3Q9P232 MIR4439-201ENST00000583746 80 ntBASIC2.43□□□□□ -2.02
CNTN3Q9P232 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.43□□□□□ -2.02
CNTN3Q9P232 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
CNTN3Q9P232 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
CNTN3Q9P232 RNU6-60P-201ENST00000364792 103 ntBASIC2.42□□□□□ -2.02
CNTN3Q9P232 Y_RNA.388-201ENST00000383919 113 ntBASIC2.42□□□□□ -2.02
CNTN3Q9P232 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.42□□□□□ -2.02
CNTN3Q9P232 MRPL35P3-201ENST00000421557 364 ntBASIC2.42□□□□□ -2.02
CNTN3Q9P232 RNU7-61P-201ENST00000515897 61 ntBASIC2.42□□□□□ -2.02
CNTN3Q9P232 RNU7-2P-201ENST00000516096 62 ntBASIC2.42□□□□□ -2.02
CNTN3Q9P232 CYP3A52P-201ENST00000563326 91 ntBASIC2.42□□□□□ -2.02
CNTN3Q9P232 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.42□□□□□ -2.02
CNTN3Q9P232 MIR8065-201ENST00000620577 100 ntBASIC2.42□□□□□ -2.02
CNTN3Q9P232 Y_RNA.95-201ENST00000363079 95 ntBASIC2.41□□□□□ -2.02
CNTN3Q9P232 MIR144-201ENST00000384886 86 ntBASIC2.41□□□□□ -2.02
CNTN3Q9P232 RNU6-644P-201ENST00000391155 98 ntBASIC2.41□□□□□ -2.02
CNTN3Q9P232 AL451046.2-201ENST00000403074 277 ntBASIC2.41□□□□□ -2.02
CNTN3Q9P232 RNU6-602P-201ENST00000411155 105 ntBASIC2.41□□□□□ -2.02
CNTN3Q9P232 AC108729.3-201ENST00000513484 108 ntBASIC2.41□□□□□ -2.02
CNTN3Q9P232 Y_RNA.659-201ENST00000515994 113 ntBASIC2.41□□□□□ -2.02
CNTN3Q9P232 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.41□□□□□ -2.02
CNTN3Q9P232 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.41□□□□□ -2.02
CNTN3Q9P232 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
CNTN3Q9P232 Y_RNA.290-201ENST00000364879 114 ntBASIC2.4□□□□□ -2.03
CNTN3Q9P232 RNU6-1134P-201ENST00000365156 101 ntBASIC2.4□□□□□ -2.03
CNTN3Q9P232 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CNTN3Q9P232 JTBP1-201ENST00000441314 247 ntBASIC2.4□□□□□ -2.03
CNTN3Q9P232 RNA5SP200-201ENST00000516360 103 ntBASIC2.4□□□□□ -2.03
CNTN3Q9P232 MIR4648-201ENST00000580107 72 ntBASIC2.4□□□□□ -2.03
CNTN3Q9P232 MIR4713-201ENST00000582691 75 ntBASIC2.4□□□□□ -2.03
CNTN3Q9P232 MIR3935-201ENST00000583472 104 ntBASIC2.4□□□□□ -2.03
CNTN3Q9P232 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
CNTN3Q9P232 MIR4251-201ENST00000635819 61 ntBASIC2.4□□□□□ -2.03
CNTN3Q9P232 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CNTN3Q9P232 RNU6-342P-201ENST00000384521 104 ntBASIC2.39□□□□□ -2.03
CNTN3Q9P232 SNORD38B-201ENST00000384690 67 ntBASIC2.39□□□□□ -2.03
CNTN3Q9P232 RNU6-1086P-201ENST00000410930 100 ntBASIC2.39□□□□□ -2.03
CNTN3Q9P232 AL161935.2-201ENST00000414627 60 ntBASIC2.39□□□□□ -2.03
CNTN3Q9P232 Y_RNA.705-201ENST00000516862 110 ntBASIC2.39□□□□□ -2.03
CNTN3Q9P232 MIR4777-201ENST00000583710 86 ntBASIC2.39□□□□□ -2.03
CNTN3Q9P232 AC062037.1-201ENST00000605302 128 ntBASIC2.39□□□□□ -2.03
CNTN3Q9P232 AL627230.6-201ENST00000611129 280 ntBASIC2.39□□□□□ -2.03
CNTN3Q9P232 U7.3-201ENST00000616123 62 ntBASIC2.39□□□□□ -2.03
CNTN3Q9P232 MIR6873-201ENST00000622788 63 ntBASIC2.39□□□□□ -2.03
CNTN3Q9P232 SNORD38B-202ENST00000625943 69 ntBASIC2.39□□□□□ -2.03
CNTN3Q9P232 RNU6-972P-201ENST00000391208 107 ntBASIC2.38□□□□□ -2.03
CNTN3Q9P232 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.38□□□□□ -2.03
CNTN3Q9P232 MIR4299-201ENST00000577899 72 ntBASIC2.38□□□□□ -2.03
CNTN3Q9P232 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.38□□□□□ -2.03
CNTN3Q9P232 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CNTN3Q9P232 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CNTN3Q9P232 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CNTN3Q9P232 RNU6-447P-201ENST00000410293 104 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 RNU6-1118P-201ENST00000410382 104 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 RNU6-1076P-201ENST00000410397 104 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 RNU6-355P-201ENST00000410427 104 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 RNU6-791P-201ENST00000410467 104 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 RNU6-705P-201ENST00000410601 104 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 RNU6-1100P-201ENST00000410691 104 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 RNU6-860P-201ENST00000410860 104 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 RNU6-1217P-201ENST00000411276 104 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 RNU6-785P-201ENST00000411324 104 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 RNU7-79P-201ENST00000516082 62 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 RN7SKP12-201ENST00000516275 143 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 SNORA44.1-201ENST00000517031 108 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.37□□□□□ -2.03
CNTN3Q9P232 MIR548AO-201ENST00000579992 96 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 U6.90-201ENST00000614007 104 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 U6.70-201ENST00000620287 104 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 MIR6132-201ENST00000622083 109 ntBASIC2.37□□□□□ -2.03
CNTN3Q9P232 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CNTN3Q9P232 RNA5SP259-201ENST00000365541 109 ntBASIC2.36□□□□□ -2.03
CNTN3Q9P232 MIR206-201ENST00000384872 86 ntBASIC2.36□□□□□ -2.03
CNTN3Q9P232 MIR513A1-201ENST00000385138 129 ntBASIC2.36□□□□□ -2.03
CNTN3Q9P232 MIR1261-201ENST00000408659 82 ntBASIC2.36□□□□□ -2.03
CNTN3Q9P232 RPS27P21-201ENST00000486977 252 ntBASIC2.36□□□□□ -2.03
CNTN3Q9P232 SNORD114-10-201ENST00000363409 72 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms