Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 Y_RNA.276-201ENST00000364732 109 ntBASIC0.21□□□□□ -2.38
HMG20BQ9P0W2 SNORA22B-201ENST00000383876 138 ntBASIC0.21□□□□□ -2.38
HMG20BQ9P0W2 Y_RNA.432-201ENST00000384087 111 ntBASIC0.21□□□□□ -2.38
HMG20BQ9P0W2 RNU6-1289P-201ENST00000384431 106 ntBASIC0.21□□□□□ -2.38
HMG20BQ9P0W2 Y_RNA.622-201ENST00000411091 108 ntBASIC0.21□□□□□ -2.38
HMG20BQ9P0W2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.21□□□□□ -2.38
HMG20BQ9P0W2 RNU6-349P-201ENST00000362402 107 ntBASIC0.2□□□□□ -2.38
HMG20BQ9P0W2 Y_RNA.158-201ENST00000363651 101 ntBASIC0.2□□□□□ -2.38
HMG20BQ9P0W2 Y_RNA.351-201ENST00000365436 96 ntBASIC0.2□□□□□ -2.38
HMG20BQ9P0W2 Y_RNA.509-201ENST00000384506 99 ntBASIC0.2□□□□□ -2.38
HMG20BQ9P0W2 Y_RNA.567-201ENST00000384736 106 ntBASIC0.2□□□□□ -2.38
HMG20BQ9P0W2 RNA5SP237-201ENST00000410414 113 ntBASIC0.2□□□□□ -2.38
HMG20BQ9P0W2 RNA5SP261-201ENST00000410536 106 ntBASIC0.2□□□□□ -2.38
HMG20BQ9P0W2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.2□□□□□ -2.38
HMG20BQ9P0W2 AC113195.1-201ENST00000579952 141 ntBASIC0.2□□□□□ -2.38
HMG20BQ9P0W2 MIR6717-201ENST00000622747 73 ntBASIC0.2□□□□□ -2.38
HMG20BQ9P0W2 MTND4P29-201ENST00000503122 1372 ntBASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 Y_RNA.84-201ENST00000363011 104 ntBASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 Y_RNA.280-201ENST00000364765 112 ntBASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 Y_RNA.304-201ENST00000365011 112 ntBASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 Y_RNA.460-201ENST00000384255 102 ntBASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 SNORA8.2-201ENST00000384372 139 ntBASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 MT-TT-201ENST00000387460 66 ntBASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 RNU4-83P-201ENST00000410863 133 ntBASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 AC113618.1-201ENST00000416747 285 ntBASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 RNU7-45P-201ENST00000459460 63 ntBASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 RNA5SP153-201ENST00000516498 76 ntBASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 MIR2909-201ENST00000617113 69 ntBASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.19□□□□□ -2.38
HMG20BQ9P0W2 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
HMG20BQ9P0W2 Y_RNA.199-201ENST00000364014 102 ntBASIC0.18□□□□□ -2.38
HMG20BQ9P0W2 RNU6-484P-201ENST00000384016 107 ntBASIC0.18□□□□□ -2.38
HMG20BQ9P0W2 SNRPGP8-201ENST00000454064 226 ntBASIC0.18□□□□□ -2.38
HMG20BQ9P0W2 RNU6-469P-201ENST00000516253 101 ntBASIC0.18□□□□□ -2.38
HMG20BQ9P0W2 RNU6-1338P-201ENST00000516328 91 ntBASIC0.18□□□□□ -2.38
HMG20BQ9P0W2 AC133485.4-201ENST00000561835 220 ntBASIC0.18□□□□□ -2.38
HMG20BQ9P0W2 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.18□□□□□ -2.38
HMG20BQ9P0W2 AP001282.2-201ENST00000616149 309 ntBASIC0.18□□□□□ -2.38
HMG20BQ9P0W2 AC134503.1-201ENST00000633048 54 ntBASIC0.18□□□□□ -2.38
HMG20BQ9P0W2 Y_RNA.117-201ENST00000363294 101 ntBASIC0.17□□□□□ -2.38
HMG20BQ9P0W2 Y_RNA.275-201ENST00000364726 110 ntBASIC0.17□□□□□ -2.38
HMG20BQ9P0W2 RNY3P5-201ENST00000384127 102 ntBASIC0.17□□□□□ -2.38
HMG20BQ9P0W2 MTND5P22-201ENST00000458380 195 ntBASIC0.17□□□□□ -2.38
HMG20BQ9P0W2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.17□□□□□ -2.38
HMG20BQ9P0W2 SNORA1-201ENST00000384107 130 ntBASIC0.16□□□□□ -2.38
HMG20BQ9P0W2 AL606845.1-201ENST00000404881 255 ntBASIC0.16□□□□□ -2.38
HMG20BQ9P0W2 AC073261.1-201ENST00000429409 121 ntBASIC0.16□□□□□ -2.38
HMG20BQ9P0W2 MTATP6P23-201ENST00000440153 476 ntBASIC0.16□□□□□ -2.38
HMG20BQ9P0W2 MIR3152-201ENST00000579801 74 ntBASIC0.16□□□□□ -2.38
HMG20BQ9P0W2 RNU6-403P-201ENST00000363163 104 ntBASIC0.15□□□□□ -2.39
HMG20BQ9P0W2 RNU6-740P-201ENST00000364734 105 ntBASIC0.15□□□□□ -2.39
HMG20BQ9P0W2 RNA5SP299-201ENST00000391203 116 ntBASIC0.15□□□□□ -2.39
HMG20BQ9P0W2 SNORA26.6-201ENST00000391256 115 ntBASIC0.15□□□□□ -2.39
HMG20BQ9P0W2 MIR548P-201ENST00000408336 84 ntBASIC0.15□□□□□ -2.39
HMG20BQ9P0W2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.15□□□□□ -2.39
HMG20BQ9P0W2 RNU7-80P-201ENST00000459562 61 ntBASIC0.15□□□□□ -2.39
HMG20BQ9P0W2 Y_RNA.711-201ENST00000516993 102 ntBASIC0.15□□□□□ -2.39
HMG20BQ9P0W2 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.15□□□□□ -2.39
HMG20BQ9P0W2 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.15□□□□□ -2.39
HMG20BQ9P0W2 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.15□□□□□ -2.39
HMG20BQ9P0W2 AL596211.1-201ENST00000569873 2277 ntBASIC0.14□□□□□ -2.39
HMG20BQ9P0W2 RNU6-653P-201ENST00000363074 106 ntBASIC0.14□□□□□ -2.39
HMG20BQ9P0W2 MIR644A-201ENST00000385262 94 ntBASIC0.14□□□□□ -2.39
HMG20BQ9P0W2 RNU6-1228P-201ENST00000391014 107 ntBASIC0.14□□□□□ -2.39
HMG20BQ9P0W2 Y_RNA.617-201ENST00000410920 90 ntBASIC0.14□□□□□ -2.39
HMG20BQ9P0W2 RNU6-570P-201ENST00000517051 105 ntBASIC0.14□□□□□ -2.39
HMG20BQ9P0W2 MIR4768-201ENST00000585270 74 ntBASIC0.14□□□□□ -2.39
HMG20BQ9P0W2 Y_RNA.44-201ENST00000362676 108 ntBASIC0.13□□□□□ -2.39
HMG20BQ9P0W2 RNU6-815P-201ENST00000384080 113 ntBASIC0.13□□□□□ -2.39
HMG20BQ9P0W2 Y_RNA.433-201ENST00000384089 102 ntBASIC0.13□□□□□ -2.39
HMG20BQ9P0W2 Y_RNA.454-201ENST00000384224 113 ntBASIC0.13□□□□□ -2.39
HMG20BQ9P0W2 RNU6-1203P-201ENST00000410703 110 ntBASIC0.13□□□□□ -2.39
HMG20BQ9P0W2 RNU6-863P-201ENST00000515989 104 ntBASIC0.13□□□□□ -2.39
HMG20BQ9P0W2 RNU6-453P-201ENST00000516819 85 ntBASIC0.13□□□□□ -2.39
HMG20BQ9P0W2 MIR4680-201ENST00000580906 66 ntBASIC0.13□□□□□ -2.39
HMG20BQ9P0W2 MIR3129-201ENST00000581095 76 ntBASIC0.13□□□□□ -2.39
HMG20BQ9P0W2 MIR8066-201ENST00000617280 78 ntBASIC0.13□□□□□ -2.39
HMG20BQ9P0W2 AL662814.1-201ENST00000617364 121 ntBASIC0.13□□□□□ -2.39
HMG20BQ9P0W2 AC078938.1-201ENST00000620993 318 ntBASIC0.13□□□□□ -2.39
HMG20BQ9P0W2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
HMG20BQ9P0W2 Y_RNA.23-201ENST00000362496 106 ntBASIC0.12□□□□□ -2.39
HMG20BQ9P0W2 Y_RNA.42-201ENST00000362660 108 ntBASIC0.12□□□□□ -2.39
HMG20BQ9P0W2 Y_RNA.138-201ENST00000363462 102 ntBASIC0.12□□□□□ -2.39
HMG20BQ9P0W2 SNORA20-201ENST00000384662 132 ntBASIC0.12□□□□□ -2.39
HMG20BQ9P0W2 MIR616-201ENST00000385293 97 ntBASIC0.12□□□□□ -2.39
HMG20BQ9P0W2 MTND4LP11-201ENST00000422184 280 ntBASIC0.12□□□□□ -2.39
HMG20BQ9P0W2 AL512326.2-201ENST00000426359 151 ntBASIC0.12□□□□□ -2.39
HMG20BQ9P0W2 MIR4431-201ENST00000579990 94 ntBASIC0.12□□□□□ -2.39
HMG20BQ9P0W2 AC097639.2-201ENST00000603159 172 ntBASIC0.12□□□□□ -2.39
HMG20BQ9P0W2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.12□□□□□ -2.39
HMG20BQ9P0W2 Y_RNA.13-201ENST00000362403 112 ntBASIC0.11□□□□□ -2.39
HMG20BQ9P0W2 SNORA36.1-201ENST00000363424 132 ntBASIC0.11□□□□□ -2.39
HMG20BQ9P0W2 RNU6-1099P-201ENST00000363533 107 ntBASIC0.11□□□□□ -2.39
HMG20BQ9P0W2 Y_RNA.153-201ENST00000363615 91 ntBASIC0.11□□□□□ -2.39
HMG20BQ9P0W2 Y_RNA.216-201ENST00000364205 93 ntBASIC0.11□□□□□ -2.39
HMG20BQ9P0W2 snoU2_19.4-201ENST00000364329 80 ntBASIC0.11□□□□□ -2.39
HMG20BQ9P0W2 RNU6-597P-201ENST00000365620 102 ntBASIC0.11□□□□□ -2.39
HMG20BQ9P0W2 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms