Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.23□□□□□ -2.37
KLHL28Q9NXS3 RNU6-561P-201ENST00000516222 102 ntBASIC0.23□□□□□ -2.37
KLHL28Q9NXS3 SNORD92-201ENST00000585078 85 ntBASIC0.23□□□□□ -2.37
KLHL28Q9NXS3 AL356055.1-201ENST00000602528 446 ntBASIC0.23□□□□□ -2.37
KLHL28Q9NXS3 AC092634.7-201ENST00000621022 103 ntBASIC0.23□□□□□ -2.37
KLHL28Q9NXS3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.23□□□□□ -2.37
KLHL28Q9NXS3 Y_RNA.85-201ENST00000363014 111 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 Y_RNA.202-201ENST00000364083 110 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 SNORA33.2-201ENST00000365413 134 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 Y_RNA.410-201ENST00000383992 113 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 Y_RNA.432-201ENST00000384087 111 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-1319P-201ENST00000390855 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-747P-201ENST00000390928 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-241P-201ENST00000391148 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-447P-201ENST00000410293 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-1118P-201ENST00000410382 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-1076P-201ENST00000410397 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-355P-201ENST00000410427 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-791P-201ENST00000410467 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-705P-201ENST00000410601 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-1100P-201ENST00000410691 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-860P-201ENST00000410860 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU2-55P-201ENST00000411146 174 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-1217P-201ENST00000411276 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-785P-201ENST00000411324 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 AC113618.1-201ENST00000416747 285 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 MTCYBP6-201ENST00000441810 138 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 SNORD2.1-201ENST00000458762 69 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-126P-201ENST00000516685 103 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU6-1153P-201ENST00000516760 105 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 AC097639.2-201ENST00000603159 172 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 U6.90-201ENST00000614007 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 U6.70-201ENST00000620287 104 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 MIR6717-201ENST00000622747 73 ntBASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
KLHL28Q9NXS3 RNU4-67P-201ENST00000364569 141 ntBASIC0.21□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.351-201ENST00000365436 96 ntBASIC0.21□□□□□ -2.38
KLHL28Q9NXS3 RNU6-1109P-201ENST00000391187 107 ntBASIC0.21□□□□□ -2.38
KLHL28Q9NXS3 TRBVB-201ENST00000477100 408 ntBASIC0.21□□□□□ -2.38
KLHL28Q9NXS3 RNA5SP153-201ENST00000516498 76 ntBASIC0.21□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.701-201ENST00000516812 110 ntBASIC0.21□□□□□ -2.38
KLHL28Q9NXS3 RNA5SP94-201ENST00000516917 108 ntBASIC0.21□□□□□ -2.38
KLHL28Q9NXS3 AL442663.2-201ENST00000554385 511 ntBASIC0.21□□□□□ -2.38
KLHL28Q9NXS3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.21□□□□□ -2.38
KLHL28Q9NXS3 MIR3129-201ENST00000581095 76 ntBASIC0.21□□□□□ -2.38
KLHL28Q9NXS3 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
KLHL28Q9NXS3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.21□□□□□ -2.38
KLHL28Q9NXS3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.82-201ENST00000363000 102 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.92-201ENST00000363043 102 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 SNORD44.1-201ENST00000363202 61 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.199-201ENST00000364014 102 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.235-201ENST00000364412 102 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.306-201ENST00000365015 102 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.312-201ENST00000365089 102 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.322-201ENST00000365151 102 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.374-201ENST00000365606 101 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 RNY3P5-201ENST00000384127 102 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 MIR616-201ENST00000385293 97 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 SNORA26-201ENST00000391286 122 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.617-201ENST00000410920 90 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 RNA5SP127-201ENST00000411051 133 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.650-201ENST00000459002 102 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 SNORA25.12-201ENST00000516202 82 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.777-201ENST00000516982 102 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 MIR3678-201ENST00000578455 94 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.771-201ENST00000598668 102 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 AC023932.2-201ENST00000603176 175 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 SNORA25.18-201ENST00000607153 114 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 U2.14-201ENST00000615943 113 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.789-201ENST00000622480 102 ntBASIC0.2□□□□□ -2.38
KLHL28Q9NXS3 MIR302B-201ENST00000362188 73 ntBASIC0.19□□□□□ -2.38
KLHL28Q9NXS3 RNU6-349P-201ENST00000362402 107 ntBASIC0.19□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.416-201ENST00000384014 113 ntBASIC0.19□□□□□ -2.38
KLHL28Q9NXS3 MIR518A1-201ENST00000385068 85 ntBASIC0.19□□□□□ -2.38
KLHL28Q9NXS3 MT-TF-201ENST00000387314 71 ntBASIC0.19□□□□□ -2.38
KLHL28Q9NXS3 MT-TW-201ENST00000387382 68 ntBASIC0.19□□□□□ -2.38
KLHL28Q9NXS3 MTATP8P1-201ENST00000467115 207 ntBASIC0.19□□□□□ -2.38
KLHL28Q9NXS3 RNU6-448P-201ENST00000517052 107 ntBASIC0.19□□□□□ -2.38
KLHL28Q9NXS3 MIR8066-201ENST00000617280 78 ntBASIC0.19□□□□□ -2.38
KLHL28Q9NXS3 AL365265.1-201ENST00000621045 234 ntBASIC0.19□□□□□ -2.38
KLHL28Q9NXS3 RNU6-797P-201ENST00000363101 109 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 RNU6-639P-201ENST00000384074 107 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.483-201ENST00000384380 101 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 RNU6-381P-201ENST00000391259 108 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 SNORD93-201ENST00000408813 74 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.590-201ENST00000410140 107 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 SNORA40.8-201ENST00000411034 126 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 SNRPGP12-201ENST00000449481 213 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 AC133485.4-201ENST00000561835 220 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 MIR4643-201ENST00000577473 78 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 MIR4431-201ENST00000579990 94 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 MIR2909-201ENST00000617113 69 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 AL662814.1-201ENST00000617364 121 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 AC091932.4-201ENST00000623386 200 ntBASIC0.18□□□□□ -2.38
KLHL28Q9NXS3 Y_RNA.42-201ENST00000362660 108 ntBASIC0.17□□□□□ -2.38
KLHL28Q9NXS3 RNU6-653P-201ENST00000363074 106 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 232.1 ms