Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC015818.7-201ENST00000428754 109 ntBASIC0.54□□□□□ -2.32
BLOC1S4Q9NUP1 AC087499.7-201ENST00000441958 109 ntBASIC0.54□□□□□ -2.32
BLOC1S4Q9NUP1 MIR6717-201ENST00000622747 73 ntBASIC0.54□□□□□ -2.32
BLOC1S4Q9NUP1 Y_RNA.145-201ENST00000363527 102 ntBASIC0.53□□□□□ -2.32
BLOC1S4Q9NUP1 Y_RNA.483-201ENST00000384380 101 ntBASIC0.53□□□□□ -2.32
BLOC1S4Q9NUP1 Y_RNA.512-201ENST00000384518 102 ntBASIC0.53□□□□□ -2.32
BLOC1S4Q9NUP1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.53□□□□□ -2.32
BLOC1S4Q9NUP1 RPL39P25-201ENST00000449384 154 ntBASIC0.53□□□□□ -2.32
BLOC1S4Q9NUP1 MTATP8P1-201ENST00000467115 207 ntBASIC0.53□□□□□ -2.32
BLOC1S4Q9NUP1 Y_RNA.673-201ENST00000516306 88 ntBASIC0.53□□□□□ -2.32
BLOC1S4Q9NUP1 RNU7-70P-201ENST00000516941 66 ntBASIC0.53□□□□□ -2.32
BLOC1S4Q9NUP1 AC090897.1-201ENST00000580909 226 ntBASIC0.53□□□□□ -2.32
BLOC1S4Q9NUP1 SNORD92-201ENST00000585078 85 ntBASIC0.53□□□□□ -2.32
BLOC1S4Q9NUP1 AL365205.2-201ENST00000594586 68 ntBASIC0.53□□□□□ -2.32
BLOC1S4Q9NUP1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.23-201ENST00000362496 106 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 RNU1-133P-201ENST00000364867 167 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 SNORA1-201ENST00000384107 130 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 SNORA20-201ENST00000384662 132 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 MT-TW-201ENST00000387382 68 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 SNORD100-201ENST00000408573 76 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 MIR548H3-201ENST00000408771 118 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 RNU7-156P-201ENST00000517214 74 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 MIR3129-201ENST00000581095 76 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 AL162730.1-201ENST00000605734 292 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.812-201ENST00000610788 101 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 AL442067.1-201ENST00000613261 223 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.784-201ENST00000613803 101 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.787-201ENST00000616522 101 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.780-201ENST00000617336 101 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.801-201ENST00000619005 101 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 uc_338.16-201ENST00000621804 95 ntBASIC0.52□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.326-201ENST00000365176 113 ntBASIC0.51□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.355-201ENST00000365462 98 ntBASIC0.51□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.416-201ENST00000384014 113 ntBASIC0.51□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.430-201ENST00000384081 110 ntBASIC0.51□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.508-201ENST00000384502 114 ntBASIC0.51□□□□□ -2.33
BLOC1S4Q9NUP1 SNORD12C-201ENST00000386307 89 ntBASIC0.51□□□□□ -2.33
BLOC1S4Q9NUP1 MIR548F4-201ENST00000408515 105 ntBASIC0.51□□□□□ -2.33
BLOC1S4Q9NUP1 RNA5SP237-201ENST00000410414 113 ntBASIC0.51□□□□□ -2.33
BLOC1S4Q9NUP1 RNU6-1190P-201ENST00000410811 104 ntBASIC0.51□□□□□ -2.33
BLOC1S4Q9NUP1 RNU6-1132P-201ENST00000459214 107 ntBASIC0.51□□□□□ -2.33
BLOC1S4Q9NUP1 uc_338.6-201ENST00000613544 171 ntBASIC0.51□□□□□ -2.33
BLOC1S4Q9NUP1 AC022709.1-201ENST00000615967 87 ntBASIC0.51□□□□□ -2.33
BLOC1S4Q9NUP1 RNA5SP347-201ENST00000362445 119 ntBASIC0.5□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.118-201ENST00000363300 101 ntBASIC0.5□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.149-201ENST00000363558 117 ntBASIC0.5□□□□□ -2.33
BLOC1S4Q9NUP1 MIR606-201ENST00000384851 96 ntBASIC0.5□□□□□ -2.33
BLOC1S4Q9NUP1 RNU7-102P-201ENST00000458948 62 ntBASIC0.5□□□□□ -2.33
BLOC1S4Q9NUP1 snoU13.18-201ENST00000459483 104 ntBASIC0.5□□□□□ -2.33
BLOC1S4Q9NUP1 RNA5SP436-201ENST00000516020 115 ntBASIC0.5□□□□□ -2.33
BLOC1S4Q9NUP1 SNORD116-25-201ENST00000516517 92 ntBASIC0.5□□□□□ -2.33
BLOC1S4Q9NUP1 RNU6-229P-201ENST00000516614 102 ntBASIC0.5□□□□□ -2.33
BLOC1S4Q9NUP1 AC092634.7-201ENST00000621022 103 ntBASIC0.5□□□□□ -2.33
BLOC1S4Q9NUP1 MIR30D-201ENST00000362283 70 ntBASIC0.49□□□□□ -2.33
BLOC1S4Q9NUP1 SNORA26.6-201ENST00000391256 115 ntBASIC0.49□□□□□ -2.33
BLOC1S4Q9NUP1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.49□□□□□ -2.33
BLOC1S4Q9NUP1 AL117187.1-201ENST00000555482 181 ntBASIC0.49□□□□□ -2.33
BLOC1S4Q9NUP1 MIR4744-201ENST00000581563 82 ntBASIC0.49□□□□□ -2.33
BLOC1S4Q9NUP1 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.49□□□□□ -2.33
BLOC1S4Q9NUP1 MIR6515-201ENST00000619843 57 ntBASIC0.49□□□□□ -2.33
BLOC1S4Q9NUP1 AC091932.4-201ENST00000623386 200 ntBASIC0.49□□□□□ -2.33
BLOC1S4Q9NUP1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
BLOC1S4Q9NUP1 AC090625.1-201ENST00000357130 210 ntBASIC0.48□□□□□ -2.33
BLOC1S4Q9NUP1 RNA5SP117-201ENST00000365294 118 ntBASIC0.48□□□□□ -2.33
BLOC1S4Q9NUP1 RNY1P8-201ENST00000383970 114 ntBASIC0.48□□□□□ -2.33
BLOC1S4Q9NUP1 RNU6-472P-201ENST00000384299 107 ntBASIC0.48□□□□□ -2.33
BLOC1S4Q9NUP1 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
BLOC1S4Q9NUP1 AL121914.1-201ENST00000450188 156 ntBASIC0.48□□□□□ -2.33
BLOC1S4Q9NUP1 RNU6-893P-201ENST00000458841 100 ntBASIC0.48□□□□□ -2.33
BLOC1S4Q9NUP1 MIR6513-201ENST00000621188 64 ntBASIC0.48□□□□□ -2.33
BLOC1S4Q9NUP1 AL596211.1-201ENST00000569873 2277 ntBASIC0.47□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.54-201ENST00000362766 105 ntBASIC0.47□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.288-201ENST00000364854 92 ntBASIC0.47□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.292-201ENST00000364904 97 ntBASIC0.47□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.515-201ENST00000384535 112 ntBASIC0.47□□□□□ -2.33
BLOC1S4Q9NUP1 Y_RNA.556-201ENST00000384677 113 ntBASIC0.47□□□□□ -2.33
BLOC1S4Q9NUP1 SNORD71-201ENST00000411292 86 ntBASIC0.47□□□□□ -2.33
BLOC1S4Q9NUP1 AC002350.1-201ENST00000490759 375 ntBASIC0.47□□□□□ -2.33
BLOC1S4Q9NUP1 RNU6-448P-201ENST00000517052 107 ntBASIC0.47□□□□□ -2.33
BLOC1S4Q9NUP1 RNA5SP193-201ENST00000410353 107 ntBASIC0.46□□□□□ -2.34
BLOC1S4Q9NUP1 AC008737.2-201ENST00000599446 118 ntBASIC0.46□□□□□ -2.34
BLOC1S4Q9NUP1 Y_RNA.277-201ENST00000364754 102 ntBASIC0.45□□□□□ -2.34
BLOC1S4Q9NUP1 SNORD93-201ENST00000408813 74 ntBASIC0.45□□□□□ -2.34
BLOC1S4Q9NUP1 MIR378D2-201ENST00000580636 98 ntBASIC0.45□□□□□ -2.34
BLOC1S4Q9NUP1 Y_RNA.121-201ENST00000363309 113 ntBASIC0.44□□□□□ -2.34
BLOC1S4Q9NUP1 RNA5SP127-201ENST00000411051 133 ntBASIC0.44□□□□□ -2.34
BLOC1S4Q9NUP1 RNU6-561P-201ENST00000516222 102 ntBASIC0.44□□□□□ -2.34
BLOC1S4Q9NUP1 AP003327.1-201ENST00000529684 127 ntBASIC0.44□□□□□ -2.34
BLOC1S4Q9NUP1 AC008608.1-201ENST00000603910 127 ntBASIC0.44□□□□□ -2.34
BLOC1S4Q9NUP1 AL662814.1-201ENST00000617364 121 ntBASIC0.44□□□□□ -2.34
BLOC1S4Q9NUP1 AC243829.3-201ENST00000622177 108 ntBASIC0.44□□□□□ -2.34
BLOC1S4Q9NUP1 MIR5087-201ENST00000635826 76 ntBASIC0.44□□□□□ -2.34
BLOC1S4Q9NUP1 Y_RNA.47-201ENST00000362697 108 ntBASIC0.43□□□□□ -2.34
BLOC1S4Q9NUP1 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
BLOC1S4Q9NUP1 RNY1-201ENST00000364228 113 ntBASIC0.43□□□□□ -2.34
BLOC1S4Q9NUP1 Y_RNA.396-201ENST00000383949 103 ntBASIC0.43□□□□□ -2.34
BLOC1S4Q9NUP1 RNU6-578P-201ENST00000390980 103 ntBASIC0.43□□□□□ -2.34
BLOC1S4Q9NUP1 RNU6-679P-201ENST00000391003 106 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 289.2 ms