Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.46□□□□□ -2.34
EXOSC3Q9NQT5 MIR18A-201ENST00000362310 71 ntBASIC0.45□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-103P-201ENST00000363686 107 ntBASIC0.45□□□□□ -2.34
EXOSC3Q9NQT5 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
EXOSC3Q9NQT5 Y_RNA.542-201ENST00000384641 111 ntBASIC0.45□□□□□ -2.34
EXOSC3Q9NQT5 MIR140-201ENST00000385282 100 ntBASIC0.45□□□□□ -2.34
EXOSC3Q9NQT5 MIR1257-201ENST00000408490 117 ntBASIC0.45□□□□□ -2.34
EXOSC3Q9NQT5 MIR548H3-201ENST00000408771 118 ntBASIC0.45□□□□□ -2.34
EXOSC3Q9NQT5 AC092628.1-201ENST00000436250 252 ntBASIC0.45□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-1132P-201ENST00000459214 107 ntBASIC0.45□□□□□ -2.34
EXOSC3Q9NQT5 MIR5000-201ENST00000577717 103 ntBASIC0.45□□□□□ -2.34
EXOSC3Q9NQT5 MIR4744-201ENST00000581563 82 ntBASIC0.45□□□□□ -2.34
EXOSC3Q9NQT5 AL162730.1-201ENST00000605734 292 ntBASIC0.45□□□□□ -2.34
EXOSC3Q9NQT5 RNU2-4P-201ENST00000606190 192 ntBASIC0.45□□□□□ -2.34
EXOSC3Q9NQT5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
EXOSC3Q9NQT5 MIR30D-201ENST00000362283 70 ntBASIC0.44□□□□□ -2.34
EXOSC3Q9NQT5 RNA5SP347-201ENST00000362445 119 ntBASIC0.44□□□□□ -2.34
EXOSC3Q9NQT5 Y_RNA.65-201ENST00000362846 100 ntBASIC0.44□□□□□ -2.34
EXOSC3Q9NQT5 RNA5SP499-201ENST00000363982 119 ntBASIC0.44□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-923P-201ENST00000364753 107 ntBASIC0.44□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-364P-201ENST00000384387 107 ntBASIC0.44□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-1237P-201ENST00000384777 107 ntBASIC0.44□□□□□ -2.34
EXOSC3Q9NQT5 MIR568-201ENST00000385036 95 ntBASIC0.44□□□□□ -2.34
EXOSC3Q9NQT5 MIR563-201ENST00000385080 79 ntBASIC0.44□□□□□ -2.34
EXOSC3Q9NQT5 MIR125B2-201ENST00000385128 89 ntBASIC0.44□□□□□ -2.34
EXOSC3Q9NQT5 Y_RNA.618-201ENST00000410949 107 ntBASIC0.44□□□□□ -2.34
EXOSC3Q9NQT5 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.44□□□□□ -2.34
EXOSC3Q9NQT5 MTND2P23-201ENST00000422990 651 ntBASIC0.44□□□□□ -2.34
EXOSC3Q9NQT5 RNU7-102P-201ENST00000458948 62 ntBASIC0.44□□□□□ -2.34
EXOSC3Q9NQT5 Y_RNA.269-201ENST00000364685 89 ntBASIC0.43□□□□□ -2.34
EXOSC3Q9NQT5 Y_RNA.562-201ENST00000384695 113 ntBASIC0.43□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-578P-201ENST00000390980 103 ntBASIC0.43□□□□□ -2.34
EXOSC3Q9NQT5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.43□□□□□ -2.34
EXOSC3Q9NQT5 RNU4-43P-201ENST00000410628 137 ntBASIC0.43□□□□□ -2.34
EXOSC3Q9NQT5 MTCYBP9-201ENST00000431021 303 ntBASIC0.43□□□□□ -2.34
EXOSC3Q9NQT5 RNU7-80P-201ENST00000459562 61 ntBASIC0.43□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-327P-201ENST00000516270 127 ntBASIC0.43□□□□□ -2.34
EXOSC3Q9NQT5 Y_RNA.673-201ENST00000516306 88 ntBASIC0.43□□□□□ -2.34
EXOSC3Q9NQT5 RNU7-156P-201ENST00000517214 74 ntBASIC0.43□□□□□ -2.34
EXOSC3Q9NQT5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.43□□□□□ -2.34
EXOSC3Q9NQT5 AC018659.1-201ENST00000551083 169 ntBASIC0.43□□□□□ -2.34
EXOSC3Q9NQT5 AL365205.2-201ENST00000594586 68 ntBASIC0.43□□□□□ -2.34
EXOSC3Q9NQT5 Z83818.1-201ENST00000603584 150 ntBASIC0.43□□□□□ -2.34
EXOSC3Q9NQT5 RNY4P28-201ENST00000365281 93 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 Y_RNA.354-201ENST00000365448 111 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-1292P-201ENST00000383856 107 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-1319P-201ENST00000390855 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-747P-201ENST00000390928 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-241P-201ENST00000391148 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-447P-201ENST00000410293 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-1118P-201ENST00000410382 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-1076P-201ENST00000410397 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-355P-201ENST00000410427 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-791P-201ENST00000410467 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-705P-201ENST00000410601 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-1100P-201ENST00000410691 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-860P-201ENST00000410860 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-1217P-201ENST00000411276 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-785P-201ENST00000411324 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-229P-201ENST00000516614 102 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 MIR378D2-201ENST00000580636 98 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 U6.90-201ENST00000614007 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 U6.70-201ENST00000620287 104 ntBASIC0.42□□□□□ -2.34
EXOSC3Q9NQT5 Y_RNA.133-201ENST00000363428 110 ntBASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-978P-201ENST00000364371 103 ntBASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 Y_RNA.238-201ENST00000364441 102 ntBASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 Y_RNA.454-201ENST00000384224 113 ntBASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 Y_RNA.539-201ENST00000384635 107 ntBASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 MT-TF-201ENST00000387314 71 ntBASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-679P-201ENST00000391003 106 ntBASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 RNA5SP261-201ENST00000410536 106 ntBASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 MTND1P19-201ENST00000511780 315 ntBASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 Y_RNA.797-201ENST00000515977 94 ntBASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 SNORD116-25-201ENST00000516517 92 ntBASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 RNU6-1223P-201ENST00000517124 104 ntBASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.41□□□□□ -2.34
EXOSC3Q9NQT5 Y_RNA.182-201ENST00000363880 111 ntBASIC0.4□□□□□ -2.35
EXOSC3Q9NQT5 SNORD93-201ENST00000408813 74 ntBASIC0.4□□□□□ -2.35
EXOSC3Q9NQT5 RNA5SP237-201ENST00000410414 113 ntBASIC0.4□□□□□ -2.35
EXOSC3Q9NQT5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.4□□□□□ -2.35
EXOSC3Q9NQT5 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
EXOSC3Q9NQT5 AC098934.3-201ENST00000430450 190 ntBASIC0.4□□□□□ -2.35
EXOSC3Q9NQT5 RNU7-70P-201ENST00000516941 66 ntBASIC0.4□□□□□ -2.35
EXOSC3Q9NQT5 MIR4308-201ENST00000580634 81 ntBASIC0.4□□□□□ -2.35
EXOSC3Q9NQT5 AC090897.1-201ENST00000580909 226 ntBASIC0.4□□□□□ -2.35
EXOSC3Q9NQT5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
EXOSC3Q9NQT5 Y_RNA.224-201ENST00000364308 111 ntBASIC0.39□□□□□ -2.35
EXOSC3Q9NQT5 RNU1-133P-201ENST00000364867 167 ntBASIC0.39□□□□□ -2.35
EXOSC3Q9NQT5 SNORA20-201ENST00000384662 132 ntBASIC0.39□□□□□ -2.35
EXOSC3Q9NQT5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.39□□□□□ -2.35
EXOSC3Q9NQT5 Y_RNA.626-201ENST00000411288 95 ntBASIC0.39□□□□□ -2.35
EXOSC3Q9NQT5 SNORA68.3-201ENST00000515906 83 ntBASIC0.39□□□□□ -2.35
EXOSC3Q9NQT5 Y_RNA.668-201ENST00000516233 93 ntBASIC0.39□□□□□ -2.35
EXOSC3Q9NQT5 SCARNA15.1-201ENST00000516384 125 ntBASIC0.39□□□□□ -2.35
EXOSC3Q9NQT5 Y_RNA.676-201ENST00000516393 96 ntBASIC0.39□□□□□ -2.35
EXOSC3Q9NQT5 MIR3152-201ENST00000579801 74 ntBASIC0.39□□□□□ -2.35
EXOSC3Q9NQT5 MIR3128-201ENST00000581957 66 ntBASIC0.39□□□□□ -2.35
EXOSC3Q9NQT5 SNORD92-201ENST00000585078 85 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms