Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 RNU6-613P-201ENST00000410412 108 ntBASIC0.68□□□□□ -2.3
HPS4Q9NQG7 RNU6-1190P-201ENST00000410811 104 ntBASIC0.68□□□□□ -2.3
HPS4Q9NQG7 HMGN1P33-201ENST00000432945 451 ntBASIC0.68□□□□□ -2.3
HPS4Q9NQG7 AL121914.1-201ENST00000450188 156 ntBASIC0.68□□□□□ -2.3
HPS4Q9NQG7 AC067940.1-201ENST00000458411 300 ntBASIC0.68□□□□□ -2.3
HPS4Q9NQG7 RPS29P24-201ENST00000486345 171 ntBASIC0.68□□□□□ -2.3
HPS4Q9NQG7 RNU4-71P-201ENST00000516258 113 ntBASIC0.68□□□□□ -2.3
HPS4Q9NQG7 RNU6-1110P-201ENST00000516462 101 ntBASIC0.68□□□□□ -2.3
HPS4Q9NQG7 MIR2115-201ENST00000516657 100 ntBASIC0.68□□□□□ -2.3
HPS4Q9NQG7 Y_RNA.182-201ENST00000363880 111 ntBASIC0.67□□□□□ -2.3
HPS4Q9NQG7 RNU6-396P-201ENST00000365369 105 ntBASIC0.67□□□□□ -2.3
HPS4Q9NQG7 SNORA2B-201ENST00000384583 137 ntBASIC0.67□□□□□ -2.3
HPS4Q9NQG7 Y_RNA.571-201ENST00000384753 98 ntBASIC0.67□□□□□ -2.3
HPS4Q9NQG7 RNU6-205P-201ENST00000390858 107 ntBASIC0.67□□□□□ -2.3
HPS4Q9NQG7 SNORD99-201ENST00000408612 74 ntBASIC0.67□□□□□ -2.3
HPS4Q9NQG7 RNA5SP193-201ENST00000410353 107 ntBASIC0.67□□□□□ -2.3
HPS4Q9NQG7 RNU6-994P-201ENST00000410507 111 ntBASIC0.67□□□□□ -2.3
HPS4Q9NQG7 RNU4-43P-201ENST00000410628 137 ntBASIC0.67□□□□□ -2.3
HPS4Q9NQG7 RNU6-733P-201ENST00000410759 104 ntBASIC0.67□□□□□ -2.3
HPS4Q9NQG7 snoU13.16-201ENST00000459350 104 ntBASIC0.67□□□□□ -2.3
HPS4Q9NQG7 snoU13.21-201ENST00000459368 105 ntBASIC0.67□□□□□ -2.3
HPS4Q9NQG7 MIR342-201ENST00000362212 99 ntBASIC0.66□□□□□ -2.3
HPS4Q9NQG7 RNU6-47P-201ENST00000383866 107 ntBASIC0.66□□□□□ -2.3
HPS4Q9NQG7 RNU6-1189P-201ENST00000383958 107 ntBASIC0.66□□□□□ -2.3
HPS4Q9NQG7 Y_RNA.440-201ENST00000384120 114 ntBASIC0.66□□□□□ -2.3
HPS4Q9NQG7 Y_RNA.797-201ENST00000515977 94 ntBASIC0.66□□□□□ -2.3
HPS4Q9NQG7 AC004817.2-201ENST00000561794 651 ntBASIC0.66□□□□□ -2.3
HPS4Q9NQG7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
HPS4Q9NQG7 MIR411-201ENST00000362239 96 ntBASIC0.65□□□□□ -2.31
HPS4Q9NQG7 RNU6-978P-201ENST00000364371 103 ntBASIC0.65□□□□□ -2.31
HPS4Q9NQG7 Y_RNA.410-201ENST00000383992 113 ntBASIC0.65□□□□□ -2.31
HPS4Q9NQG7 Y_RNA.412-201ENST00000384001 104 ntBASIC0.65□□□□□ -2.31
HPS4Q9NQG7 RNU4-70P-201ENST00000384579 139 ntBASIC0.65□□□□□ -2.31
HPS4Q9NQG7 RNU6-918P-201ENST00000391219 106 ntBASIC0.65□□□□□ -2.31
HPS4Q9NQG7 SNORA79-201ENST00000408376 140 ntBASIC0.65□□□□□ -2.31
HPS4Q9NQG7 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.65□□□□□ -2.31
HPS4Q9NQG7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.65□□□□□ -2.31
HPS4Q9NQG7 RNU7-73P-201ENST00000458743 63 ntBASIC0.65□□□□□ -2.31
HPS4Q9NQG7 RNU2-11P-201ENST00000459191 187 ntBASIC0.65□□□□□ -2.31
HPS4Q9NQG7 RNU6-998P-201ENST00000515894 101 ntBASIC0.65□□□□□ -2.31
HPS4Q9NQG7 MIR4711-201ENST00000578274 70 ntBASIC0.65□□□□□ -2.31
HPS4Q9NQG7 AL136317.1-201ENST00000612653 226 ntBASIC0.65□□□□□ -2.31
HPS4Q9NQG7 uc_338.6-201ENST00000613544 171 ntBASIC0.65□□□□□ -2.31
HPS4Q9NQG7 U6.106-201ENST00000636360 105 ntBASIC0.65□□□□□ -2.31
HPS4Q9NQG7 Y_RNA.121-201ENST00000363309 113 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 Y_RNA.168-201ENST00000363740 102 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 Y_RNA.200-201ENST00000364018 102 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 Y_RNA.274-201ENST00000364714 101 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
HPS4Q9NQG7 MIR548I3-201ENST00000408378 149 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 AC244023.1-201ENST00000426884 112 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 AC015818.7-201ENST00000428754 109 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 AC087499.7-201ENST00000441958 109 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 RNU7-45P-201ENST00000459460 63 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 RNU7-96P-201ENST00000459535 64 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.64□□□□□ -2.31
HPS4Q9NQG7 RNU7-53P-201ENST00000516705 60 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 AC130289.1-201ENST00000577321 73 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 MIR5197-201ENST00000583721 112 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 AL365205.2-201ENST00000594586 68 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 AC009779.6-201ENST00000603972 165 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 AC242498.1-201ENST00000604134 111 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 MIR8055-201ENST00000610739 97 ntBASIC0.64□□□□□ -2.31
HPS4Q9NQG7 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 Y_RNA.83-201ENST00000363005 113 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 RNU6-275P-201ENST00000364910 107 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 RNU6-1336P-201ENST00000383886 109 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 RNU6-643P-201ENST00000384018 107 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 Y_RNA.542-201ENST00000384641 111 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 MT-TN-201ENST00000387400 73 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 snosnR66.1-201ENST00000391095 99 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 MIR1827-201ENST00000408549 66 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 SEPT7P4-201ENST00000437076 306 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 AC022559.1-201ENST00000520905 205 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 MIR378D2-201ENST00000580636 98 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 uc_338.17-201ENST00000619633 179 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 Z97988.1-201ENST00000637697 135 ntBASIC0.63□□□□□ -2.31
HPS4Q9NQG7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.62□□□□□ -2.31
HPS4Q9NQG7 MIR377-201ENST00000362145 69 ntBASIC0.62□□□□□ -2.31
HPS4Q9NQG7 RNU6-369P-201ENST00000362515 102 ntBASIC0.62□□□□□ -2.31
HPS4Q9NQG7 RNU6-580P-201ENST00000365159 107 ntBASIC0.62□□□□□ -2.31
HPS4Q9NQG7 Y_RNA.351-201ENST00000365436 96 ntBASIC0.62□□□□□ -2.31
HPS4Q9NQG7 RNU6-602P-201ENST00000411155 105 ntBASIC0.62□□□□□ -2.31
HPS4Q9NQG7 SNORD83.1-201ENST00000411362 77 ntBASIC0.62□□□□□ -2.31
HPS4Q9NQG7 AC098934.3-201ENST00000430450 190 ntBASIC0.62□□□□□ -2.31
HPS4Q9NQG7 RNU6-1271P-201ENST00000517049 105 ntBASIC0.62□□□□□ -2.31
HPS4Q9NQG7 MIR4264-201ENST00000583520 66 ntBASIC0.62□□□□□ -2.31
HPS4Q9NQG7 AP000753.3-201ENST00000604083 169 ntBASIC0.62□□□□□ -2.31
HPS4Q9NQG7 AC078938.1-201ENST00000620993 318 ntBASIC0.62□□□□□ -2.31
HPS4Q9NQG7 MIR1-1-201ENST00000362147 71 ntBASIC0.61□□□□□ -2.31
HPS4Q9NQG7 RNU6-379P-201ENST00000363813 104 ntBASIC0.61□□□□□ -2.31
HPS4Q9NQG7 Y_RNA.188-201ENST00000363952 111 ntBASIC0.61□□□□□ -2.31
HPS4Q9NQG7 Y_RNA.489-201ENST00000384410 101 ntBASIC0.61□□□□□ -2.31
HPS4Q9NQG7 SNORA26.6-201ENST00000391256 115 ntBASIC0.61□□□□□ -2.31
HPS4Q9NQG7 AC092628.1-201ENST00000436250 252 ntBASIC0.61□□□□□ -2.31
HPS4Q9NQG7 RNU7-62P-201ENST00000458856 62 ntBASIC0.61□□□□□ -2.31
HPS4Q9NQG7 SNORD116-25-201ENST00000516517 92 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms