Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 SNORA26.6-201ENST00000391256 115 ntBASIC1.02□□□□□ -2.25
HINT3Q9NQE9 AC244023.1-201ENST00000426884 112 ntBASIC1.02□□□□□ -2.25
HINT3Q9NQE9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.02□□□□□ -2.25
HINT3Q9NQE9 AC242498.1-201ENST00000604134 111 ntBASIC1.02□□□□□ -2.25
HINT3Q9NQE9 MIR6717-201ENST00000622747 73 ntBASIC1.02□□□□□ -2.25
HINT3Q9NQE9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
HINT3Q9NQE9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.01□□□□□ -2.25
HINT3Q9NQE9 MIR377-201ENST00000362145 69 ntBASIC1.01□□□□□ -2.25
HINT3Q9NQE9 Y_RNA.164-201ENST00000363709 102 ntBASIC1.01□□□□□ -2.25
HINT3Q9NQE9 Y_RNA.168-201ENST00000363740 102 ntBASIC1.01□□□□□ -2.25
HINT3Q9NQE9 Y_RNA.555-201ENST00000384673 110 ntBASIC1.01□□□□□ -2.25
HINT3Q9NQE9 RNU6-1319P-201ENST00000390855 104 ntBASIC1.01□□□□□ -2.25
HINT3Q9NQE9 RNU6-205P-201ENST00000390858 107 ntBASIC1.01□□□□□ -2.25
HINT3Q9NQE9 RNU6-747P-201ENST00000390928 104 ntBASIC1.01□□□□□ -2.25
HINT3Q9NQE9 Y_RNA.580-201ENST00000391004 95 ntBASIC1.01□□□□□ -2.25
HINT3Q9NQE9 RNU6-241P-201ENST00000391148 104 ntBASIC1.01□□□□□ -2.25
HINT3Q9NQE9 SNORD111-201ENST00000408139 94 ntBASIC1.01□□□□□ -2.25
HINT3Q9NQE9 RNA5SP261-201ENST00000410536 106 ntBASIC1.01□□□□□ -2.25
HINT3Q9NQE9 RNU6-602P-201ENST00000411155 105 ntBASIC1.01□□□□□ -2.25
HINT3Q9NQE9 RNU6-177P-201ENST00000411257 104 ntBASIC1.01□□□□□ -2.25
HINT3Q9NQE9 SNORD124-201ENST00000459577 104 ntBASIC1.01□□□□□ -2.25
HINT3Q9NQE9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.01□□□□□ -2.25
HINT3Q9NQE9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
HINT3Q9NQE9 RNU6-580P-201ENST00000365159 107 ntBASIC1□□□□□ -2.25
HINT3Q9NQE9 RNU6-1130P-201ENST00000365434 107 ntBASIC1□□□□□ -2.25
HINT3Q9NQE9 RNU6-449P-201ENST00000383914 107 ntBASIC1□□□□□ -2.25
HINT3Q9NQE9 MIR200A-201ENST00000384875 90 ntBASIC1□□□□□ -2.25
HINT3Q9NQE9 RNU6-907P-201ENST00000390924 102 ntBASIC1□□□□□ -2.25
HINT3Q9NQE9 RPS3AP1-201ENST00000413190 320 ntBASIC1□□□□□ -2.25
HINT3Q9NQE9 RNA5SP236-201ENST00000516169 116 ntBASIC1□□□□□ -2.25
HINT3Q9NQE9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1□□□□□ -2.25
HINT3Q9NQE9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
HINT3Q9NQE9 RNY1P11-201ENST00000363759 113 ntBASIC0.99□□□□□ -2.25
HINT3Q9NQE9 RNU6-151P-201ENST00000364158 107 ntBASIC0.99□□□□□ -2.25
HINT3Q9NQE9 RNU4-11P-201ENST00000365287 132 ntBASIC0.99□□□□□ -2.25
HINT3Q9NQE9 RNU6-804P-201ENST00000384286 107 ntBASIC0.99□□□□□ -2.25
HINT3Q9NQE9 AC112693.2-201ENST00000556538 232 ntBASIC0.99□□□□□ -2.25
HINT3Q9NQE9 MIR3144-201ENST00000579460 79 ntBASIC0.99□□□□□ -2.25
HINT3Q9NQE9 MIR3152-201ENST00000579801 74 ntBASIC0.99□□□□□ -2.25
HINT3Q9NQE9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.99□□□□□ -2.25
HINT3Q9NQE9 HSPE1P19-201ENST00000603327 295 ntBASIC0.99□□□□□ -2.25
HINT3Q9NQE9 RNU6-94P-201ENST00000607728 107 ntBASIC0.99□□□□□ -2.25
HINT3Q9NQE9 Y_RNA.778-201ENST00000620203 90 ntBASIC0.99□□□□□ -2.25
HINT3Q9NQE9 AC021613.1-201ENST00000623880 111 ntBASIC0.99□□□□□ -2.25
HINT3Q9NQE9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
HINT3Q9NQE9 SNORD114-24-201ENST00000365029 72 ntBASIC0.98□□□□□ -2.25
HINT3Q9NQE9 RNU6-53P-201ENST00000365367 106 ntBASIC0.98□□□□□ -2.25
HINT3Q9NQE9 SNORD116-18-201ENST00000383961 92 ntBASIC0.98□□□□□ -2.25
HINT3Q9NQE9 RPS29P28-201ENST00000446439 141 ntBASIC0.98□□□□□ -2.25
HINT3Q9NQE9 MIR4295-201ENST00000585286 85 ntBASIC0.98□□□□□ -2.25
HINT3Q9NQE9 Y_RNA.8-201ENST00000362353 102 ntBASIC0.97□□□□□ -2.25
HINT3Q9NQE9 Y_RNA.180-201ENST00000363867 113 ntBASIC0.97□□□□□ -2.25
HINT3Q9NQE9 Y_RNA.251-201ENST00000364551 99 ntBASIC0.97□□□□□ -2.25
HINT3Q9NQE9 Y_RNA.354-201ENST00000365448 111 ntBASIC0.97□□□□□ -2.25
HINT3Q9NQE9 Y_RNA.430-201ENST00000384081 110 ntBASIC0.97□□□□□ -2.25
HINT3Q9NQE9 RNY1P6-201ENST00000384193 109 ntBASIC0.97□□□□□ -2.25
HINT3Q9NQE9 SNORA20-201ENST00000384662 132 ntBASIC0.97□□□□□ -2.25
HINT3Q9NQE9 Y_RNA.584-201ENST00000391090 114 ntBASIC0.97□□□□□ -2.25
HINT3Q9NQE9 Y_RNA.676-201ENST00000516393 96 ntBASIC0.97□□□□□ -2.25
HINT3Q9NQE9 RNU2-60P-201ENST00000517290 128 ntBASIC0.97□□□□□ -2.25
HINT3Q9NQE9 RNU4-16P-201ENST00000364737 141 ntBASIC0.96□□□□□ -2.26
HINT3Q9NQE9 Y_RNA.398-201ENST00000383952 99 ntBASIC0.96□□□□□ -2.26
HINT3Q9NQE9 SNORD12C-201ENST00000386307 89 ntBASIC0.96□□□□□ -2.26
HINT3Q9NQE9 MIR942-201ENST00000401111 86 ntBASIC0.96□□□□□ -2.26
HINT3Q9NQE9 RNU6-994P-201ENST00000410507 111 ntBASIC0.96□□□□□ -2.26
HINT3Q9NQE9 MTATP6P21-201ENST00000440681 189 ntBASIC0.96□□□□□ -2.26
HINT3Q9NQE9 RNU7-62P-201ENST00000458856 62 ntBASIC0.96□□□□□ -2.26
HINT3Q9NQE9 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
HINT3Q9NQE9 AC087343.1-201ENST00000477341 475 ntBASIC0.96□□□□□ -2.26
HINT3Q9NQE9 MIR6740-201ENST00000618268 113 ntBASIC0.96□□□□□ -2.26
HINT3Q9NQE9 AC012676.2-201ENST00000619258 186 ntBASIC0.96□□□□□ -2.26
HINT3Q9NQE9 MIR6841-201ENST00000637129 72 ntBASIC0.96□□□□□ -2.26
HINT3Q9NQE9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
HINT3Q9NQE9 RNU6-349P-201ENST00000362402 107 ntBASIC0.95□□□□□ -2.26
HINT3Q9NQE9 MIR588-201ENST00000384900 83 ntBASIC0.95□□□□□ -2.26
HINT3Q9NQE9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.95□□□□□ -2.26
HINT3Q9NQE9 FABP5P4-201ENST00000437203 171 ntBASIC0.95□□□□□ -2.26
HINT3Q9NQE9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.95□□□□□ -2.26
HINT3Q9NQE9 snoU13.2-201ENST00000459201 104 ntBASIC0.95□□□□□ -2.26
HINT3Q9NQE9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.95□□□□□ -2.26
HINT3Q9NQE9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HINT3Q9NQE9 SNORA22.1-201ENST00000362701 134 ntBASIC0.94□□□□□ -2.26
HINT3Q9NQE9 Y_RNA.120-201ENST00000363304 110 ntBASIC0.94□□□□□ -2.26
HINT3Q9NQE9 SNORD18B-201ENST00000365659 72 ntBASIC0.94□□□□□ -2.26
HINT3Q9NQE9 Y_RNA.464-201ENST00000384282 110 ntBASIC0.94□□□□□ -2.26
HINT3Q9NQE9 RNU7-197P-201ENST00000458836 62 ntBASIC0.94□□□□□ -2.26
HINT3Q9NQE9 snoU13.21-201ENST00000459368 105 ntBASIC0.94□□□□□ -2.26
HINT3Q9NQE9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.94□□□□□ -2.26
HINT3Q9NQE9 SNORD114-21-201ENST00000606412 72 ntBASIC0.94□□□□□ -2.26
HINT3Q9NQE9 AC021753.1-201ENST00000635724 168 ntBASIC0.94□□□□□ -2.26
HINT3Q9NQE9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.94□□□□□ -2.26
HINT3Q9NQE9 AL391516.1-201ENST00000554380 2449 ntBASIC0.94□□□□□ -2.26
HINT3Q9NQE9 AC067940.1-201ENST00000458411 300 ntBASIC0.93□□□□□ -2.26
HINT3Q9NQE9 RNU6-893P-201ENST00000458841 100 ntBASIC0.93□□□□□ -2.26
HINT3Q9NQE9 Y_RNA.686-201ENST00000516548 134 ntBASIC0.93□□□□□ -2.26
HINT3Q9NQE9 MTND5P41-201ENST00000517498 206 ntBASIC0.93□□□□□ -2.26
HINT3Q9NQE9 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
HINT3Q9NQE9 AC011603.4-201ENST00000611325 277 ntBASIC0.93□□□□□ -2.26
HINT3Q9NQE9 uc_338.6-201ENST00000613544 171 ntBASIC0.93□□□□□ -2.26
HINT3Q9NQE9 RNU6-934P-201ENST00000365154 107 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms