Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
A1CFQ9NQ94 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
A1CFQ9NQ94 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.42□□□□□ -2.18
A1CFQ9NQ94 Y_RNA.355-201ENST00000365462 98 ntBASIC1.42□□□□□ -2.18
A1CFQ9NQ94 Y_RNA.420-201ENST00000384043 110 ntBASIC1.42□□□□□ -2.18
A1CFQ9NQ94 MIR1185-1-201ENST00000408598 86 ntBASIC1.42□□□□□ -2.18
A1CFQ9NQ94 SNORA31.4-201ENST00000516049 129 ntBASIC1.42□□□□□ -2.18
A1CFQ9NQ94 Y_RNA.690-201ENST00000516603 95 ntBASIC1.42□□□□□ -2.18
A1CFQ9NQ94 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.42□□□□□ -2.18
A1CFQ9NQ94 AP003716.2-201ENST00000528260 108 ntBASIC1.42□□□□□ -2.18
A1CFQ9NQ94 AL020996.3-201ENST00000606617 222 ntBASIC1.42□□□□□ -2.18
A1CFQ9NQ94 MIR96-201ENST00000362288 78 ntBASIC1.41□□□□□ -2.18
A1CFQ9NQ94 RNU6-508P-201ENST00000363231 103 ntBASIC1.41□□□□□ -2.18
A1CFQ9NQ94 Y_RNA.224-201ENST00000364308 111 ntBASIC1.41□□□□□ -2.18
A1CFQ9NQ94 RNU6-915P-201ENST00000364943 103 ntBASIC1.41□□□□□ -2.18
A1CFQ9NQ94 RNU6-746P-201ENST00000384112 109 ntBASIC1.41□□□□□ -2.18
A1CFQ9NQ94 RNU6-910P-201ENST00000390844 107 ntBASIC1.41□□□□□ -2.18
A1CFQ9NQ94 MIR548M-201ENST00000408260 86 ntBASIC1.41□□□□□ -2.18
A1CFQ9NQ94 MIR1302-7-201ENST00000408841 72 ntBASIC1.41□□□□□ -2.18
A1CFQ9NQ94 RNU6-1190P-201ENST00000410811 104 ntBASIC1.41□□□□□ -2.18
A1CFQ9NQ94 HMGN1P33-201ENST00000432945 451 ntBASIC1.41□□□□□ -2.18
A1CFQ9NQ94 RNU5E-3P-201ENST00000515913 68 ntBASIC1.41□□□□□ -2.18
A1CFQ9NQ94 Y_RNA.703-201ENST00000516846 111 ntBASIC1.41□□□□□ -2.18
A1CFQ9NQ94 HSPE1P19-201ENST00000603327 295 ntBASIC1.41□□□□□ -2.18
A1CFQ9NQ94 MIR8055-201ENST00000610739 97 ntBASIC1.41□□□□□ -2.18
A1CFQ9NQ94 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
A1CFQ9NQ94 RNU6-309P-201ENST00000364573 106 ntBASIC1.4□□□□□ -2.19
A1CFQ9NQ94 SNORA1.1-201ENST00000364671 133 ntBASIC1.4□□□□□ -2.19
A1CFQ9NQ94 SNORD26-201ENST00000384147 75 ntBASIC1.4□□□□□ -2.19
A1CFQ9NQ94 AL603914.1-201ENST00000401964 204 ntBASIC1.4□□□□□ -2.19
A1CFQ9NQ94 AP001328.1-201ENST00000528550 176 ntBASIC1.4□□□□□ -2.19
A1CFQ9NQ94 MIR26B-201ENST00000362251 77 ntBASIC1.39□□□□□ -2.19
A1CFQ9NQ94 Y_RNA.363-201ENST00000365529 113 ntBASIC1.39□□□□□ -2.19
A1CFQ9NQ94 AC090844.1-201ENST00000422019 156 ntBASIC1.39□□□□□ -2.19
A1CFQ9NQ94 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.39□□□□□ -2.19
A1CFQ9NQ94 AL392103.1-201ENST00000447000 198 ntBASIC1.39□□□□□ -2.19
A1CFQ9NQ94 SNORA70.22-201ENST00000517160 124 ntBASIC1.39□□□□□ -2.19
A1CFQ9NQ94 AL022345.2-201ENST00000606307 135 ntBASIC1.39□□□□□ -2.19
A1CFQ9NQ94 MIR6717-201ENST00000622747 73 ntBASIC1.39□□□□□ -2.19
A1CFQ9NQ94 AC010332.2-201ENST00000613083 1904 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 Y_RNA.118-201ENST00000363300 101 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 Y_RNA.191-201ENST00000363972 113 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 RNU4-16P-201ENST00000364737 141 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 RNU6-396P-201ENST00000365369 105 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 SNORD114-22-201ENST00000365423 72 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 RNY1P6-201ENST00000384193 109 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 Y_RNA.568-201ENST00000384742 113 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 RNA5SP261-201ENST00000410536 106 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 RNU11-2P-201ENST00000516898 142 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 MIR3152-201ENST00000579801 74 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 AC021613.1-201ENST00000623880 111 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 AP001340.1-201ENST00000624405 217 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 Z97988.1-201ENST00000637697 135 ntBASIC1.38□□□□□ -2.19
A1CFQ9NQ94 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.37□□□□□ -2.19
A1CFQ9NQ94 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
A1CFQ9NQ94 Y_RNA.330-201ENST00000365230 109 ntBASIC1.37□□□□□ -2.19
A1CFQ9NQ94 RNU6-187P-201ENST00000384139 106 ntBASIC1.37□□□□□ -2.19
A1CFQ9NQ94 SNORA26.6-201ENST00000391256 115 ntBASIC1.37□□□□□ -2.19
A1CFQ9NQ94 SUMO1P3-201ENST00000439961 304 ntBASIC1.37□□□□□ -2.19
A1CFQ9NQ94 Y_RNA.651-201ENST00000459380 103 ntBASIC1.37□□□□□ -2.19
A1CFQ9NQ94 RN7SKP179-201ENST00000516126 217 ntBASIC1.37□□□□□ -2.19
A1CFQ9NQ94 Y_RNA.692-201ENST00000516627 105 ntBASIC1.37□□□□□ -2.19
A1CFQ9NQ94 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.37□□□□□ -2.19
A1CFQ9NQ94 MIR4452-201ENST00000583004 71 ntBASIC1.37□□□□□ -2.19
A1CFQ9NQ94 MIR6516-201ENST00000630554 81 ntBASIC1.37□□□□□ -2.19
A1CFQ9NQ94 RNU6-349P-201ENST00000362402 107 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 RNU6-690P-201ENST00000365242 106 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 SNORD38B-201ENST00000384690 67 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 MIR222-201ENST00000384992 110 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 RNU6-1319P-201ENST00000390855 104 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 RNU6-747P-201ENST00000390928 104 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 SNORA75.2-201ENST00000391138 150 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 RNU6-241P-201ENST00000391148 104 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 SNORA75.3-201ENST00000391231 150 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 RNU6-177P-201ENST00000411257 104 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 RPS3AP1-201ENST00000413190 320 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 AL591704.2-201ENST00000421658 181 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 MIR2115-201ENST00000516657 100 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 AC019288.1-201ENST00000557918 224 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 AC011603.4-201ENST00000611325 277 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 SEPT14P17-201ENST00000617978 177 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 SNORD38B-202ENST00000625943 69 ntBASIC1.36□□□□□ -2.19
A1CFQ9NQ94 SNORA80D-201ENST00000384488 135 ntBASIC1.35□□□□□ -2.19
A1CFQ9NQ94 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.35□□□□□ -2.19
A1CFQ9NQ94 snoU13.18-201ENST00000459483 104 ntBASIC1.35□□□□□ -2.19
A1CFQ9NQ94 SNORD79.1-201ENST00000516069 84 ntBASIC1.35□□□□□ -2.19
A1CFQ9NQ94 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
A1CFQ9NQ94 SNORD114-27-201ENST00000363766 70 ntBASIC1.34□□□□□ -2.19
A1CFQ9NQ94 RNU6-654P-201ENST00000364373 107 ntBASIC1.34□□□□□ -2.19
A1CFQ9NQ94 RNU1-93P-201ENST00000364704 169 ntBASIC1.34□□□□□ -2.19
A1CFQ9NQ94 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
A1CFQ9NQ94 SNORA25-201ENST00000384384 134 ntBASIC1.34□□□□□ -2.19
A1CFQ9NQ94 SNORA40-201ENST00000388090 126 ntBASIC1.34□□□□□ -2.19
A1CFQ9NQ94 RNU6-257P-201ENST00000410238 98 ntBASIC1.34□□□□□ -2.19
A1CFQ9NQ94 RNU6-602P-201ENST00000411155 105 ntBASIC1.34□□□□□ -2.19
A1CFQ9NQ94 MTND4LP9-201ENST00000427694 174 ntBASIC1.34□□□□□ -2.19
A1CFQ9NQ94 RNU6-240P-201ENST00000516098 97 ntBASIC1.34□□□□□ -2.19
A1CFQ9NQ94 Y_RNA.757-201ENST00000578934 114 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms