Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 RNU6-314P-201ENST00000516574 104 ntBASIC-1.05□□□□□ -2.58
TREM1Q9NP99 MIR378F-201ENST00000578143 78 ntBASIC-1.05□□□□□ -2.58
TREM1Q9NP99 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.05□□□□□ -2.58
TREM1Q9NP99 AC099654.14-201ENST00000638599 341 ntBASIC-1.05□□□□□ -2.58
TREM1Q9NP99 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.06□□□□□ -2.58
TREM1Q9NP99 SNORD114-25-201ENST00000363742 72 ntBASIC-1.06□□□□□ -2.58
TREM1Q9NP99 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.06□□□□□ -2.58
TREM1Q9NP99 RNU2-16P-201ENST00000410712 136 ntBASIC-1.06□□□□□ -2.58
TREM1Q9NP99 RNA5SP470-201ENST00000516463 106 ntBASIC-1.06□□□□□ -2.58
TREM1Q9NP99 RNU6-506P-201ENST00000516553 94 ntBASIC-1.06□□□□□ -2.58
TREM1Q9NP99 RNU7-110P-201ENST00000516891 62 ntBASIC-1.06□□□□□ -2.58
TREM1Q9NP99 AC100767.1-201ENST00000528178 123 ntBASIC-1.06□□□□□ -2.58
TREM1Q9NP99 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.06□□□□□ -2.58
TREM1Q9NP99 uc_338.19-201ENST00000616808 99 ntBASIC-1.06□□□□□ -2.58
TREM1Q9NP99 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.07□□□□□ -2.58
TREM1Q9NP99 RNU6-1205P-201ENST00000363625 106 ntBASIC-1.07□□□□□ -2.58
TREM1Q9NP99 RNU6-702P-201ENST00000364982 107 ntBASIC-1.07□□□□□ -2.58
TREM1Q9NP99 MIR181A1-201ENST00000385026 110 ntBASIC-1.07□□□□□ -2.58
TREM1Q9NP99 MIR204-201ENST00000385200 110 ntBASIC-1.07□□□□□ -2.58
TREM1Q9NP99 RNU6-308P-201ENST00000390957 107 ntBASIC-1.07□□□□□ -2.58
TREM1Q9NP99 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.07□□□□□ -2.58
TREM1Q9NP99 RN7SKP19-201ENST00000516016 252 ntBASIC-1.07□□□□□ -2.58
TREM1Q9NP99 RNU6-365P-201ENST00000517113 106 ntBASIC-1.07□□□□□ -2.58
TREM1Q9NP99 AL356055.1-201ENST00000602528 446 ntBASIC-1.07□□□□□ -2.58
TREM1Q9NP99 MIR342-201ENST00000362212 99 ntBASIC-1.08□□□□□ -2.58
TREM1Q9NP99 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.08□□□□□ -2.58
TREM1Q9NP99 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.08□□□□□ -2.58
TREM1Q9NP99 RNU4-58P-201ENST00000363192 141 ntBASIC-1.08□□□□□ -2.58
TREM1Q9NP99 RNA5SP403-201ENST00000363598 108 ntBASIC-1.08□□□□□ -2.58
TREM1Q9NP99 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.08□□□□□ -2.58
TREM1Q9NP99 RNU6-10P-201ENST00000384036 107 ntBASIC-1.08□□□□□ -2.58
TREM1Q9NP99 RNY3P5-201ENST00000384127 102 ntBASIC-1.08□□□□□ -2.58
TREM1Q9NP99 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.08□□□□□ -2.58
TREM1Q9NP99 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.08□□□□□ -2.58
TREM1Q9NP99 MIR9-2-201ENST00000384838 87 ntBASIC-1.08□□□□□ -2.58
TREM1Q9NP99 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.08□□□□□ -2.58
TREM1Q9NP99 SNORD114-15-201ENST00000364687 72 ntBASIC-1.09□□□□□ -2.58
TREM1Q9NP99 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.09□□□□□ -2.58
TREM1Q9NP99 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.09□□□□□ -2.58
TREM1Q9NP99 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.09□□□□□ -2.58
TREM1Q9NP99 RNU7-45P-201ENST00000459460 63 ntBASIC-1.09□□□□□ -2.58
TREM1Q9NP99 RNU6-531P-201ENST00000516694 104 ntBASIC-1.09□□□□□ -2.58
TREM1Q9NP99 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.09□□□□□ -2.58
TREM1Q9NP99 DEFB131E-201ENST00000532329 154 ntBASIC-1.09□□□□□ -2.58
TREM1Q9NP99 AL669831.3-213ENST00000636676 183 ntBASIC-1.09□□□□□ -2.58
TREM1Q9NP99 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.09□□□□□ -2.58
TREM1Q9NP99 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.1□□□□□ -2.59
TREM1Q9NP99 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.1□□□□□ -2.59
TREM1Q9NP99 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.1□□□□□ -2.59
TREM1Q9NP99 AF228730.3-201ENST00000436691 102 ntBASIC-1.1□□□□□ -2.59
TREM1Q9NP99 AP003733.2-201ENST00000529409 171 ntBASIC-1.1□□□□□ -2.59
TREM1Q9NP99 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.1□□□□□ -2.59
TREM1Q9NP99 RNU4-16P-201ENST00000364737 141 ntBASIC-1.11□□□□□ -2.59
TREM1Q9NP99 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.11□□□□□ -2.59
TREM1Q9NP99 SNORD56B-201ENST00000384713 71 ntBASIC-1.11□□□□□ -2.59
TREM1Q9NP99 MIR587-201ENST00000384845 96 ntBASIC-1.11□□□□□ -2.59
TREM1Q9NP99 MIR4473-201ENST00000583731 91 ntBASIC-1.11□□□□□ -2.59
TREM1Q9NP99 RNU6-86P-201ENST00000606534 107 ntBASIC-1.11□□□□□ -2.59
TREM1Q9NP99 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.12□□□□□ -2.59
TREM1Q9NP99 RNU4-80P-201ENST00000363200 141 ntBASIC-1.12□□□□□ -2.59
TREM1Q9NP99 SNORA20-201ENST00000384662 132 ntBASIC-1.12□□□□□ -2.59
TREM1Q9NP99 RNU6-21P-201ENST00000384710 107 ntBASIC-1.12□□□□□ -2.59
TREM1Q9NP99 RNU6-383P-201ENST00000410864 94 ntBASIC-1.12□□□□□ -2.59
TREM1Q9NP99 MTND3P8-201ENST00000412909 339 ntBASIC-1.12□□□□□ -2.59
TREM1Q9NP99 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.12□□□□□ -2.59
TREM1Q9NP99 RNU6-120P-201ENST00000516077 103 ntBASIC-1.12□□□□□ -2.59
TREM1Q9NP99 SNORD38.3-201ENST00000516599 73 ntBASIC-1.12□□□□□ -2.59
TREM1Q9NP99 RNU6-175P-201ENST00000516896 107 ntBASIC-1.12□□□□□ -2.59
TREM1Q9NP99 MIR4280-201ENST00000582178 76 ntBASIC-1.12□□□□□ -2.59
TREM1Q9NP99 MIR4306-201ENST00000583390 91 ntBASIC-1.12□□□□□ -2.59
TREM1Q9NP99 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
TREM1Q9NP99 RNY3P11-201ENST00000364153 102 ntBASIC-1.13□□□□□ -2.59
TREM1Q9NP99 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.13□□□□□ -2.59
TREM1Q9NP99 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.13□□□□□ -2.59
TREM1Q9NP99 RNY1P13-201ENST00000365030 105 ntBASIC-1.13□□□□□ -2.59
TREM1Q9NP99 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.13□□□□□ -2.59
TREM1Q9NP99 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.13□□□□□ -2.59
TREM1Q9NP99 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.13□□□□□ -2.59
TREM1Q9NP99 RNU7-80P-201ENST00000459562 61 ntBASIC-1.13□□□□□ -2.59
TREM1Q9NP99 RNA5SP395-201ENST00000516567 118 ntBASIC-1.13□□□□□ -2.59
TREM1Q9NP99 MIR3115-201ENST00000577915 68 ntBASIC-1.13□□□□□ -2.59
TREM1Q9NP99 AC138305.3-201ENST00000624988 240 ntBASIC-1.13□□□□□ -2.59
TREM1Q9NP99 MIR367-201ENST00000362299 68 ntBASIC-1.14□□□□□ -2.59
TREM1Q9NP99 RNU6-509P-201ENST00000363519 107 ntBASIC-1.14□□□□□ -2.59
TREM1Q9NP99 RNA5SP192-201ENST00000364404 120 ntBASIC-1.14□□□□□ -2.59
TREM1Q9NP99 RNY4P3-201ENST00000365254 95 ntBASIC-1.14□□□□□ -2.59
TREM1Q9NP99 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.14□□□□□ -2.59
TREM1Q9NP99 SNORD63-201ENST00000384262 68 ntBASIC-1.14□□□□□ -2.59
TREM1Q9NP99 MT-TY-201ENST00000387409 66 ntBASIC-1.14□□□□□ -2.59
TREM1Q9NP99 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.14□□□□□ -2.59
TREM1Q9NP99 SCARNA18B-201ENST00000458806 135 ntBASIC-1.14□□□□□ -2.59
TREM1Q9NP99 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.15□□□□□ -2.59
TREM1Q9NP99 MIR181B2-201ENST00000385004 89 ntBASIC-1.15□□□□□ -2.59
TREM1Q9NP99 RNU6-721P-201ENST00000410155 105 ntBASIC-1.15□□□□□ -2.59
TREM1Q9NP99 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.15□□□□□ -2.59
TREM1Q9NP99 MIR3165-201ENST00000579874 75 ntBASIC-1.15□□□□□ -2.59
TREM1Q9NP99 MIR6841-201ENST00000637129 72 ntBASIC-1.15□□□□□ -2.59
TREM1Q9NP99 MIR539-201ENST00000365690 78 ntBASIC-1.16□□□□□ -2.6
TREM1Q9NP99 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.16□□□□□ -2.6
TREM1Q9NP99 SNORA18-201ENST00000384416 132 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms