Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 Z97988.1-201ENST00000637697 135 ntBASIC1.62□□□□□ -2.15
VTA1Q9NP79 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
VTA1Q9NP79 RNU6-349P-201ENST00000362402 107 ntBASIC1.61□□□□□ -2.15
VTA1Q9NP79 RNU6-647P-201ENST00000364243 107 ntBASIC1.61□□□□□ -2.15
VTA1Q9NP79 SNORA1.1-201ENST00000364671 133 ntBASIC1.61□□□□□ -2.15
VTA1Q9NP79 RNU6-396P-201ENST00000365369 105 ntBASIC1.61□□□□□ -2.15
VTA1Q9NP79 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.61□□□□□ -2.15
VTA1Q9NP79 Y_RNA.686-201ENST00000516548 134 ntBASIC1.61□□□□□ -2.15
VTA1Q9NP79 AL353770.2-201ENST00000620024 78 ntBASIC1.61□□□□□ -2.15
VTA1Q9NP79 AC091895.1-201ENST00000624494 256 ntBASIC1.61□□□□□ -2.15
VTA1Q9NP79 RNY1P11-201ENST00000363759 113 ntBASIC1.6□□□□□ -2.15
VTA1Q9NP79 RPS3AP1-201ENST00000413190 320 ntBASIC1.6□□□□□ -2.15
VTA1Q9NP79 MTND4LP9-201ENST00000427694 174 ntBASIC1.6□□□□□ -2.15
VTA1Q9NP79 RNU6-970P-201ENST00000516312 107 ntBASIC1.6□□□□□ -2.15
VTA1Q9NP79 MIR2115-201ENST00000516657 100 ntBASIC1.6□□□□□ -2.15
VTA1Q9NP79 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1.6□□□□□ -2.15
VTA1Q9NP79 MIR6717-201ENST00000622747 73 ntBASIC1.6□□□□□ -2.15
VTA1Q9NP79 AC021613.1-201ENST00000623880 111 ntBASIC1.6□□□□□ -2.15
VTA1Q9NP79 RNU6-309P-201ENST00000364573 106 ntBASIC1.59□□□□□ -2.15
VTA1Q9NP79 Y_RNA.508-201ENST00000384502 114 ntBASIC1.59□□□□□ -2.15
VTA1Q9NP79 SNORD38B-201ENST00000384690 67 ntBASIC1.59□□□□□ -2.15
VTA1Q9NP79 MT-TN-201ENST00000387400 73 ntBASIC1.59□□□□□ -2.15
VTA1Q9NP79 RNU6-913P-201ENST00000390913 95 ntBASIC1.59□□□□□ -2.15
VTA1Q9NP79 Y_RNA.586-201ENST00000391146 98 ntBASIC1.59□□□□□ -2.15
VTA1Q9NP79 RNU6-257P-201ENST00000410238 98 ntBASIC1.59□□□□□ -2.15
VTA1Q9NP79 AC023790.1-201ENST00000482174 347 ntBASIC1.59□□□□□ -2.15
VTA1Q9NP79 RNU6-789P-201ENST00000517105 102 ntBASIC1.59□□□□□ -2.15
VTA1Q9NP79 MIR548AO-201ENST00000579992 96 ntBASIC1.59□□□□□ -2.15
VTA1Q9NP79 SNORD38B-202ENST00000625943 69 ntBASIC1.59□□□□□ -2.15
VTA1Q9NP79 MIR103A2-201ENST00000362154 78 ntBASIC1.58□□□□□ -2.16
VTA1Q9NP79 RNU6-690P-201ENST00000365242 106 ntBASIC1.58□□□□□ -2.16
VTA1Q9NP79 RNU6-187P-201ENST00000384139 106 ntBASIC1.58□□□□□ -2.16
VTA1Q9NP79 SNORD12-201ENST00000391002 90 ntBASIC1.58□□□□□ -2.16
VTA1Q9NP79 SNORA26.6-201ENST00000391256 115 ntBASIC1.57□□□□□ -2.16
VTA1Q9NP79 MIR1276-201ENST00000408707 83 ntBASIC1.57□□□□□ -2.16
VTA1Q9NP79 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.57□□□□□ -2.16
VTA1Q9NP79 Y_RNA.651-201ENST00000459380 103 ntBASIC1.57□□□□□ -2.16
VTA1Q9NP79 SNORA31.2-201ENST00000516019 134 ntBASIC1.57□□□□□ -2.16
VTA1Q9NP79 AC133485.4-201ENST00000561835 220 ntBASIC1.57□□□□□ -2.16
VTA1Q9NP79 AC138907.4-201ENST00000570107 226 ntBASIC1.57□□□□□ -2.16
VTA1Q9NP79 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VTA1Q9NP79 RNU6-81P-201ENST00000365608 104 ntBASIC1.56□□□□□ -2.16
VTA1Q9NP79 Y_RNA.466-201ENST00000384294 113 ntBASIC1.56□□□□□ -2.16
VTA1Q9NP79 SNORA80D-201ENST00000384488 135 ntBASIC1.56□□□□□ -2.16
VTA1Q9NP79 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.56□□□□□ -2.16
VTA1Q9NP79 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
VTA1Q9NP79 MIR377-201ENST00000362145 69 ntBASIC1.55□□□□□ -2.16
VTA1Q9NP79 Y_RNA.114-201ENST00000363265 113 ntBASIC1.55□□□□□ -2.16
VTA1Q9NP79 Y_RNA.280-201ENST00000364765 112 ntBASIC1.55□□□□□ -2.16
VTA1Q9NP79 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
VTA1Q9NP79 AL022718.1-201ENST00000412004 84 ntBASIC1.55□□□□□ -2.16
VTA1Q9NP79 AL158147.1-201ENST00000443970 75 ntBASIC1.55□□□□□ -2.16
VTA1Q9NP79 snoU13.25-201ENST00000458945 104 ntBASIC1.55□□□□□ -2.16
VTA1Q9NP79 RNU1-123P-201ENST00000458950 160 ntBASIC1.55□□□□□ -2.16
VTA1Q9NP79 AC048334.1-201ENST00000477975 159 ntBASIC1.55□□□□□ -2.16
VTA1Q9NP79 MIR4264-201ENST00000583520 66 ntBASIC1.55□□□□□ -2.16
VTA1Q9NP79 AP000753.3-201ENST00000604083 169 ntBASIC1.55□□□□□ -2.16
VTA1Q9NP79 SEPT14P17-201ENST00000617978 177 ntBASIC1.55□□□□□ -2.16
VTA1Q9NP79 RNU6-613P-201ENST00000410412 108 ntBASIC1.54□□□□□ -2.16
VTA1Q9NP79 AL591704.2-201ENST00000421658 181 ntBASIC1.54□□□□□ -2.16
VTA1Q9NP79 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
VTA1Q9NP79 SNORA70.22-201ENST00000517160 124 ntBASIC1.54□□□□□ -2.16
VTA1Q9NP79 MIR6078-201ENST00000611069 100 ntBASIC1.54□□□□□ -2.16
VTA1Q9NP79 MIR6841-201ENST00000637129 72 ntBASIC1.54□□□□□ -2.16
VTA1Q9NP79 SNORD26-201ENST00000384147 75 ntBASIC1.53□□□□□ -2.16
VTA1Q9NP79 MIR1185-1-201ENST00000408598 86 ntBASIC1.53□□□□□ -2.16
VTA1Q9NP79 MIR1302-7-201ENST00000408841 72 ntBASIC1.53□□□□□ -2.16
VTA1Q9NP79 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.53□□□□□ -2.16
VTA1Q9NP79 MIR4305-201ENST00000583252 102 ntBASIC1.53□□□□□ -2.16
VTA1Q9NP79 MIR6504-201ENST00000613520 61 ntBASIC1.53□□□□□ -2.16
VTA1Q9NP79 AL137067.1-201ENST00000615933 120 ntBASIC1.53□□□□□ -2.16
VTA1Q9NP79 AC132825.6-201ENST00000638861 357 ntBASIC1.53□□□□□ -2.16
VTA1Q9NP79 SNORA25.3-201ENST00000363205 127 ntBASIC1.52□□□□□ -2.17
VTA1Q9NP79 RNU6-53P-201ENST00000365367 106 ntBASIC1.52□□□□□ -2.17
VTA1Q9NP79 RNA5SP144-201ENST00000410846 116 ntBASIC1.52□□□□□ -2.17
VTA1Q9NP79 RPS29P23-201ENST00000458635 123 ntBASIC1.52□□□□□ -2.17
VTA1Q9NP79 RN7SKP179-201ENST00000516126 217 ntBASIC1.52□□□□□ -2.17
VTA1Q9NP79 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.52□□□□□ -2.17
VTA1Q9NP79 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.52□□□□□ -2.17
VTA1Q9NP79 MIR3910-1-201ENST00000580936 111 ntBASIC1.52□□□□□ -2.17
VTA1Q9NP79 MIR3660-201ENST00000584845 100 ntBASIC1.52□□□□□ -2.17
VTA1Q9NP79 AC021443.1-201ENST00000604478 211 ntBASIC1.52□□□□□ -2.17
VTA1Q9NP79 SNORA22.1-201ENST00000362701 134 ntBASIC1.51□□□□□ -2.17
VTA1Q9NP79 RNU6-80P-201ENST00000384195 107 ntBASIC1.51□□□□□ -2.17
VTA1Q9NP79 RNA5SP136-201ENST00000410906 107 ntBASIC1.51□□□□□ -2.17
VTA1Q9NP79 RNU6-602P-201ENST00000411155 105 ntBASIC1.51□□□□□ -2.17
VTA1Q9NP79 MRPL35P3-201ENST00000421557 364 ntBASIC1.51□□□□□ -2.17
VTA1Q9NP79 AC004223.1-201ENST00000479840 271 ntBASIC1.51□□□□□ -2.17
VTA1Q9NP79 RNU5E-3P-201ENST00000515913 68 ntBASIC1.51□□□□□ -2.17
VTA1Q9NP79 RNA5SP272-201ENST00000516095 111 ntBASIC1.51□□□□□ -2.17
VTA1Q9NP79 RNU6-240P-201ENST00000516098 97 ntBASIC1.51□□□□□ -2.17
VTA1Q9NP79 SNORD115-2-201ENST00000362842 82 ntBASIC1.5□□□□□ -2.17
VTA1Q9NP79 Y_RNA.299-201ENST00000364973 94 ntBASIC1.5□□□□□ -2.17
VTA1Q9NP79 SNORD115-20-201ENST00000365099 82 ntBASIC1.5□□□□□ -2.17
VTA1Q9NP79 RNU6-910P-201ENST00000390844 107 ntBASIC1.5□□□□□ -2.17
VTA1Q9NP79 SNORA40.6-201ENST00000391153 128 ntBASIC1.5□□□□□ -2.17
VTA1Q9NP79 Y_RNA.617-201ENST00000410920 90 ntBASIC1.5□□□□□ -2.17
VTA1Q9NP79 RNU4-61P-201ENST00000411243 107 ntBASIC1.5□□□□□ -2.17
VTA1Q9NP79 SNORD79.1-201ENST00000516069 84 ntBASIC1.5□□□□□ -2.17
VTA1Q9NP79 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms