Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MIR216A-201ENST00000385063 110 ntBASIC0.21□□□□□ -2.38
HMG20AQ9NP66 MIR518A1-201ENST00000385068 85 ntBASIC0.21□□□□□ -2.38
HMG20AQ9NP66 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.21□□□□□ -2.38
HMG20AQ9NP66 RNU2-55P-201ENST00000411146 174 ntBASIC0.21□□□□□ -2.38
HMG20AQ9NP66 MTCYBP6-201ENST00000441810 138 ntBASIC0.21□□□□□ -2.38
HMG20AQ9NP66 MTATP8P1-201ENST00000467115 207 ntBASIC0.21□□□□□ -2.38
HMG20AQ9NP66 TRBVB-201ENST00000477100 408 ntBASIC0.21□□□□□ -2.38
HMG20AQ9NP66 RNA5SP153-201ENST00000516498 76 ntBASIC0.21□□□□□ -2.38
HMG20AQ9NP66 AC133485.4-201ENST00000561835 220 ntBASIC0.21□□□□□ -2.38
HMG20AQ9NP66 MIR8066-201ENST00000617280 78 ntBASIC0.21□□□□□ -2.38
HMG20AQ9NP66 MIR302B-201ENST00000362188 73 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.416-201ENST00000384014 113 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 MIR644A-201ENST00000385262 94 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 MIR616-201ENST00000385293 97 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 MT-TW-201ENST00000387382 68 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 RNU6-1109P-201ENST00000391187 107 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 SNORD93-201ENST00000408813 74 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 SNRPGP12-201ENST00000449481 213 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 AC108740.1-201ENST00000498629 225 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 RNU6-126P-201ENST00000516685 103 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.701-201ENST00000516812 110 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 RNU6-448P-201ENST00000517052 107 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 AC097639.2-201ENST00000603159 172 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 U2.14-201ENST00000615943 113 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 AL365265.1-201ENST00000621045 234 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
HMG20AQ9NP66 AL596211.1-201ENST00000569873 2277 ntBASIC0.2□□□□□ -2.38
HMG20AQ9NP66 RNU6-238P-201ENST00000363313 106 ntBASIC0.19□□□□□ -2.38
HMG20AQ9NP66 SNORA36.1-201ENST00000363424 132 ntBASIC0.19□□□□□ -2.38
HMG20AQ9NP66 RNA5SP117-201ENST00000365294 118 ntBASIC0.19□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.483-201ENST00000384380 101 ntBASIC0.19□□□□□ -2.38
HMG20AQ9NP66 MIR613-201ENST00000385248 95 ntBASIC0.19□□□□□ -2.38
HMG20AQ9NP66 MT-TF-201ENST00000387314 71 ntBASIC0.19□□□□□ -2.38
HMG20AQ9NP66 RNU6-381P-201ENST00000391259 108 ntBASIC0.19□□□□□ -2.38
HMG20AQ9NP66 SNORA26-201ENST00000391286 122 ntBASIC0.19□□□□□ -2.38
HMG20AQ9NP66 RNU4-83P-201ENST00000410863 133 ntBASIC0.19□□□□□ -2.38
HMG20AQ9NP66 SNORA40.8-201ENST00000411034 126 ntBASIC0.19□□□□□ -2.38
HMG20AQ9NP66 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.19□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.673-201ENST00000516306 88 ntBASIC0.19□□□□□ -2.38
HMG20AQ9NP66 MIR4643-201ENST00000577473 78 ntBASIC0.19□□□□□ -2.38
HMG20AQ9NP66 AL442067.1-201ENST00000613261 223 ntBASIC0.19□□□□□ -2.38
HMG20AQ9NP66 AC091932.4-201ENST00000623386 200 ntBASIC0.19□□□□□ -2.38
HMG20AQ9NP66 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.13-201ENST00000362403 112 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.42-201ENST00000362660 108 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.82-201ENST00000363000 102 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.92-201ENST00000363043 102 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.235-201ENST00000364412 102 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.306-201ENST00000365015 102 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.312-201ENST00000365089 102 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.322-201ENST00000365151 102 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 RNY3P5-201ENST00000384127 102 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 SNORA8.2-201ENST00000384372 139 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.567-201ENST00000384736 106 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 U8.15-201ENST00000390947 134 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.590-201ENST00000410140 107 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.18□□□□□ -2.38
HMG20AQ9NP66 SEPT7P4-201ENST00000437076 306 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.650-201ENST00000459002 102 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.777-201ENST00000516982 102 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 AC022523.2-201ENST00000561045 150 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.771-201ENST00000598668 102 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.789-201ENST00000622480 102 ntBASIC0.18□□□□□ -2.38
HMG20AQ9NP66 RNU6-653P-201ENST00000363074 106 ntBASIC0.17□□□□□ -2.38
HMG20AQ9NP66 RNU6-403P-201ENST00000363163 104 ntBASIC0.17□□□□□ -2.38
HMG20AQ9NP66 RNU6-639P-201ENST00000384074 107 ntBASIC0.17□□□□□ -2.38
HMG20AQ9NP66 AC096949.1-201ENST00000412047 152 ntBASIC0.17□□□□□ -2.38
HMG20AQ9NP66 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC0.17□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.679-201ENST00000516416 91 ntBASIC0.17□□□□□ -2.38
HMG20AQ9NP66 RNU6-635P-201ENST00000516651 102 ntBASIC0.17□□□□□ -2.38
HMG20AQ9NP66 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.17□□□□□ -2.38
HMG20AQ9NP66 MIR5197-201ENST00000583721 112 ntBASIC0.17□□□□□ -2.38
HMG20AQ9NP66 AL662814.1-201ENST00000617364 121 ntBASIC0.17□□□□□ -2.38
HMG20AQ9NP66 AC078938.1-201ENST00000620993 318 ntBASIC0.17□□□□□ -2.38
HMG20AQ9NP66 AC010487.4-201ENST00000637027 61 ntBASIC0.17□□□□□ -2.38
HMG20AQ9NP66 AC090625.1-201ENST00000357130 210 ntBASIC0.16□□□□□ -2.38
HMG20AQ9NP66 RNU6-797P-201ENST00000363101 109 ntBASIC0.16□□□□□ -2.38
HMG20AQ9NP66 RNA5SP62-201ENST00000363457 110 ntBASIC0.16□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.176-201ENST00000363815 109 ntBASIC0.16□□□□□ -2.38
HMG20AQ9NP66 RNU6-815P-201ENST00000384080 113 ntBASIC0.16□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.588-201ENST00000391254 102 ntBASIC0.16□□□□□ -2.38
HMG20AQ9NP66 RNA5SP237-201ENST00000410414 113 ntBASIC0.16□□□□□ -2.38
HMG20AQ9NP66 Y_RNA.604-201ENST00000410574 102 ntBASIC0.16□□□□□ -2.38
HMG20AQ9NP66 SNORD71-201ENST00000411292 86 ntBASIC0.16□□□□□ -2.38
HMG20AQ9NP66 RNY3P16-201ENST00000516338 101 ntBASIC0.16□□□□□ -2.38
HMG20AQ9NP66 MIR4282-201ENST00000583613 67 ntBASIC0.16□□□□□ -2.38
HMG20AQ9NP66 RNU6-1327P-201ENST00000365302 105 ntBASIC0.15□□□□□ -2.39
HMG20AQ9NP66 RNU6-713P-201ENST00000384761 107 ntBASIC0.15□□□□□ -2.39
HMG20AQ9NP66 Y_RNA.618-201ENST00000410949 107 ntBASIC0.15□□□□□ -2.39
HMG20AQ9NP66 SNORA62.5-201ENST00000516634 120 ntBASIC0.15□□□□□ -2.39
HMG20AQ9NP66 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.15□□□□□ -2.39
HMG20AQ9NP66 AC141846.1-201ENST00000568348 142 ntBASIC0.15□□□□□ -2.39
HMG20AQ9NP66 MIR4431-201ENST00000579990 94 ntBASIC0.15□□□□□ -2.39
HMG20AQ9NP66 RN7SL793P-201ENST00000583259 296 ntBASIC0.15□□□□□ -2.39
HMG20AQ9NP66 AC011921.3-201ENST00000605540 361 ntBASIC0.15□□□□□ -2.39
HMG20AQ9NP66 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.15□□□□□ -2.39
HMG20AQ9NP66 Y_RNA.32-201ENST00000362589 110 ntBASIC0.14□□□□□ -2.39
HMG20AQ9NP66 Y_RNA.76-201ENST00000362931 109 ntBASIC0.14□□□□□ -2.39
HMG20AQ9NP66 Y_RNA.542-201ENST00000384641 111 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms